SH3BP1 ORF clone pFN21AB5225

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Halotag ORF Clone pFN21AB5225

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Clone info.

Species

human

Clone Name

pFN21AB5225 Sequence (with vector) Restriction Map

Product ID

FHC02174

Flexi Clone PID

FXC02174

ORF Sequence

DNA sequence (2103 bp)
Protein sequence (701 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463257]

Gene

KIBB5225

Symbol

SH3BP1

Alias : ARHGAP43

Description

SH3-domain binding protein 1

Original Clone ID

oc00054

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 2103 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 701 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13952.2 1.5e-92 100.0 SH3BP1 CCDS32408.1 8.1e-16 42.7 ARHGAP17 CCDS82077.1 2.7e-14 41.1 ARHGAP44 CCDS32409.1 7.2e-14 41.1 ARHGAP17 CCDS82076.1 1.7e-13 40.5 ARHGAP44 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004148 2 252 PF03114 BAR IPR000198 292 437 PF00620 Rho GTPase-activating protein domain HMMSmart IPR004148 1 254 SM00721 BAR IPR000198 287 466 SM00324 Rho GTPase-activating protein domain ProfileScan IPR004148 17 262 PS51021 BAR IPR000198 276 469 PS50238 Rho GTPase-activating protein domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016878879 794 608293 42.0 99.3 NP_060524 803 608293 42.7 99.3 XP_011544180 835 608293 42.0 99.3 XP_011544179 836 608293 39.0 87.2 XP_011544178 872 608293 40.4 98.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5225 Download

>KIBB5225  2103 bp
ATGATGAAGAGGCAGCTGCACCGCATGCGGCAGCTGGCCCAGACGGGCAGCTTGGGACGC
ACCCCGGAGACCGCTGAGTTCCTGGGTGAGGACCTGCTGCAGGTAGAACAGCGGCTGGAG
CCGGCCAAGCGGGCAGCCCACAACATCCACAAGCGGCTGCAGGCCTGTCTGCAGGGCCAG
AGCGGGGCAGACATGGACAAGCGGGTGAAGAAGCTTCCCCTCATGGCTCTGTCCACCACG
ATGGCTGAGAGCTTCAAGGAGCTGGACCCTGATTCCAGCATGGGGAAGGCCTTGGAGATG
AGCTGTGCCATCCAGAATCAGCTGGCCCGCATCCTGGCCGAGTTTGAGATGACCCTGGAG
AGGGACGTCCTGCAGCCACTCAGCAGGCTGAGTGAGGAGGAGCTGCCAGCCATCCTCAAA
CACAAGAAAAGCCTCCAGAAGCTCGTGTCCGACTGGAACACACTCAAGAGCAGGCTCAGT
CAGGCAACCAAGAATTCAGGCAGCAGTCAAGGCCTAGGAGGCAGCCCGGGTAGTCACAGC
CATACGACCATGGCCAACAAGGTGGAGACGCTGAAGGAGGAGGAGGAGGAGCTGAAGAGG
AAAGTGGAGCAATGCAGGGACGAGTACTTGGCTGACCTGTACCACTTTGTTACCAAGGAG
GACTCCTATGCCAACTACTTCATTCGTCTCCTGGAGATTCAGGCCGATTACCATCGCAGG
TCACTGAGCTCGCTGGACACAGCCCTGGCTGAGCTGAGGGAGAACCACGGCCAAGCAGAC
CACTCCCCTTCGATGACAGCCACCCACTTCCCCAGGGTGTATGGGGTGTCGCTGGCAACC
CACCTGCAAGAGCTGGGCCGGGAGATTGCCCTGCCCATCGAGGCCTGCGTCATGATGCTG
CTTTCTGAGGGCATGAAGGAAGAGGGTCTCTTCCGTCTGGCTGCTGGGGCCTCGGTGCTG
AAGCGTCTCAAGCAGACAATGGCCTCGGACCCCCACAGCCTGGAGGAGTTCTGCTCCGAC
CCGCACGCTGTGGCAGGTGCCCTCAAGTCCTATCTGCGGGAGCTGCCAGAGCCTCTGATG
ACCTTCGACCTCTATGATGACTGGATGAGGGCAGCCAGCCTGAAGGAGCCAGGGGCCCGG
CTGCAGGCCCTCCAAGAGGTGTGCAGCCGCCTACCCCCCGAGAACCTCAGCAACCTCAGG
TACCTGATGAAGTTCCTGGCACGGCTGGCCGAGGAGCAGGAGGTGAACAAGATGACACCC
AGCAACATCGCCATAGTCCTGGGACCCAACTTGCTGTGGCCACCTGAGAAAGAAGGGGAC
CAGGCCCAGCTGGATGCAGCCTCCGTGTCTTCCATCCAGGTGGTGGGCGTCGTCGAGGCG
CTGATCCAGAGCGCAGACACCCTCTTCCCTGGAGACATCAACTTCAACGTGTCAGGCCTC
TTCTCAGCTGTTACCCTCCAGGACACAGTCAGTGACAGGCTGGCCTCTGAGGAACTTCCG
TCCACTGCCGTGCCCACCCCAGCCACCACCCCGGCTCCGGCTCCGGCTCCAGCTCCAGCT
CCGGCCCCAGCCTTGGCTTCAGCAGCTACCAAGGAAAGGACAGAGTCTGAGGTGCCTCCC
AGACCAGCCTCCCCCAAGGTCACCAGGAGTCCCCCGGAGACAGCTGCCCCAGTGGAGGAC
ATGGCTCGGAGGACCAAGCGCCCGGCGCCAGCCCGGCCCACCATGCCGCCCCCCCAGGTC
TCCGGCTCCCGCTCCTCCCCTCCAGCCCCGCCCTTGCCCCCTGGCTCTGGCAGCCCTGGG
ACCCCCCAAGCCCTGCCCCGACGTCTGGTTGGCAGCAGCCTCCGAGCCCCCACAGTGCCA
CCCCCGTTACCCCCCACACCCCCTCAGCCTGCCCGGCGCCAAAGCCGGCGTTCACCAGCC
TCCCCCAGCCCGGCCTCCCCAGGTCCAGCCTCCCCCAGCCCAGTCTCTTTGAGTAACCCT
GCACAGGTGGACCTGGGGGCTGCCACAGCAGAGGGAGGAGCCCCTGAGGCTATCAGTGGG
GTCCCCACTCCCCCAGCTATCCCCCCGCAGCCCCGCCCCAGGAGCCTTGCCTCAGAGACC
AAC

ORF Protein

Cloned ORF protein sequence for pFN21AB5225 Download

>KIBB5225  701 aa
MMKRQLHRMRQLAQTGSLGRTPETAEFLGEDLLQVEQRLEPAKRAAHNIHKRLQACLQGQ
SGADMDKRVKKLPLMALSTTMAESFKELDPDSSMGKALEMSCAIQNQLARILAEFEMTLE
RDVLQPLSRLSEEELPAILKHKKSLQKLVSDWNTLKSRLSQATKNSGSSQGLGGSPGSHS
HTTMANKVETLKEEEEELKRKVEQCRDEYLADLYHFVTKEDSYANYFIRLLEIQADYHRR
SLSSLDTALAELRENHGQADHSPSMTATHFPRVYGVSLATHLQELGREIALPIEACVMML
LSEGMKEEGLFRLAAGASVLKRLKQTMASDPHSLEEFCSDPHAVAGALKSYLRELPEPLM
TFDLYDDWMRAASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTP
SNIAIVLGPNLLWPPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGL
FSAVTLQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPP
RPASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPG
TPQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNP
AQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASETN

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5225 Download

>pFN21AB5225  6808 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGAAGAGGCAGCTGCACCGCATGCGGCAGCT
GGCCCAGACGGGCAGCTTGGGACGCACCCCGGAGACCGCTGAGTTCCTGGGTGAGGACCT
GCTGCAGGTAGAACAGCGGCTGGAGCCGGCCAAGCGGGCAGCCCACAACATCCACAAGCG
GCTGCAGGCCTGTCTGCAGGGCCAGAGCGGGGCAGACATGGACAAGCGGGTGAAGAAGCT
TCCCCTCATGGCTCTGTCCACCACGATGGCTGAGAGCTTCAAGGAGCTGGACCCTGATTC
CAGCATGGGGAAGGCCTTGGAGATGAGCTGTGCCATCCAGAATCAGCTGGCCCGCATCCT
GGCCGAGTTTGAGATGACCCTGGAGAGGGACGTCCTGCAGCCACTCAGCAGGCTGAGTGA
GGAGGAGCTGCCAGCCATCCTCAAACACAAGAAAAGCCTCCAGAAGCTCGTGTCCGACTG
GAACACACTCAAGAGCAGGCTCAGTCAGGCAACCAAGAATTCAGGCAGCAGTCAAGGCCT
AGGAGGCAGCCCGGGTAGTCACAGCCATACGACCATGGCCAACAAGGTGGAGACGCTGAA
GGAGGAGGAGGAGGAGCTGAAGAGGAAAGTGGAGCAATGCAGGGACGAGTACTTGGCTGA
CCTGTACCACTTTGTTACCAAGGAGGACTCCTATGCCAACTACTTCATTCGTCTCCTGGA
GATTCAGGCCGATTACCATCGCAGGTCACTGAGCTCGCTGGACACAGCCCTGGCTGAGCT
GAGGGAGAACCACGGCCAAGCAGACCACTCCCCTTCGATGACAGCCACCCACTTCCCCAG
GGTGTATGGGGTGTCGCTGGCAACCCACCTGCAAGAGCTGGGCCGGGAGATTGCCCTGCC
CATCGAGGCCTGCGTCATGATGCTGCTTTCTGAGGGCATGAAGGAAGAGGGTCTCTTCCG
TCTGGCTGCTGGGGCCTCGGTGCTGAAGCGTCTCAAGCAGACAATGGCCTCGGACCCCCA
CAGCCTGGAGGAGTTCTGCTCCGACCCGCACGCTGTGGCAGGTGCCCTCAAGTCCTATCT
GCGGGAGCTGCCAGAGCCTCTGATGACCTTCGACCTCTATGATGACTGGATGAGGGCAGC
CAGCCTGAAGGAGCCAGGGGCCCGGCTGCAGGCCCTCCAAGAGGTGTGCAGCCGCCTACC
CCCCGAGAACCTCAGCAACCTCAGGTACCTGATGAAGTTCCTGGCACGGCTGGCCGAGGA
GCAGGAGGTGAACAAGATGACACCCAGCAACATCGCCATAGTCCTGGGACCCAACTTGCT
GTGGCCACCTGAGAAAGAAGGGGACCAGGCCCAGCTGGATGCAGCCTCCGTGTCTTCCAT
CCAGGTGGTGGGCGTCGTCGAGGCGCTGATCCAGAGCGCAGACACCCTCTTCCCTGGAGA
CATCAACTTCAACGTGTCAGGCCTCTTCTCAGCTGTTACCCTCCAGGACACAGTCAGTGA
CAGGCTGGCCTCTGAGGAACTTCCGTCCACTGCCGTGCCCACCCCAGCCACCACCCCGGC
TCCGGCTCCGGCTCCAGCTCCAGCTCCGGCCCCAGCCTTGGCTTCAGCAGCTACCAAGGA
AAGGACAGAGTCTGAGGTGCCTCCCAGACCAGCCTCCCCCAAGGTCACCAGGAGTCCCCC
GGAGACAGCTGCCCCAGTGGAGGACATGGCTCGGAGGACCAAGCGCCCGGCGCCAGCCCG
GCCCACCATGCCGCCCCCCCAGGTCTCCGGCTCCCGCTCCTCCCCTCCAGCCCCGCCCTT
GCCCCCTGGCTCTGGCAGCCCTGGGACCCCCCAAGCCCTGCCCCGACGTCTGGTTGGCAG
CAGCCTCCGAGCCCCCACAGTGCCACCCCCGTTACCCCCCACACCCCCTCAGCCTGCCCG
GCGCCAAAGCCGGCGTTCACCAGCCTCCCCCAGCCCGGCCTCCCCAGGTCCAGCCTCCCC
CAGCCCAGTCTCTTTGAGTAACCCTGCACAGGTGGACCTGGGGGCTGCCACAGCAGAGGG
AGGAGCCCCTGAGGCTATCAGTGGGGTCCCCACTCCCCCAGCTATCCCCCCGCAGCCCCG
CCCCAGGAGCCTTGCCTCAGAGACCAACGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT