CPEB3 ORF clone pF1KSDA0940

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Flexi ORF Clone pF1KSDA0940

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Clone info.

Species

human

Clone Name

pF1KSDA0940 Sequence (with vector) Restriction Map

Product ID

FXC00691

HaloTag Clone PID

FHC00691

ORF Sequence

DNA sequence (2052 bp)
Protein sequence (684 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384052]

Gene

KIAA0940

Symbol

CPEB3

Description

cytoplasmic polyadenylation element binding protein 3, transcript variant 2

Original Clone ID

hh04894

Features of the cloned ORF sequence

Description

Length: 2052 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 684 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53553.1 2.7e-110 100.0 CPEB3 CCDS31246.1 1.7e-56 95.3 CPEB3 CCDS56326.1 1.1e-50 62.1 CPEB2 CCDS4390.1 1.5e-50 60.6 CPEB4 CCDS56325.1 2.5e-47 59.7 CPEB2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 429 490 PF00076 RNA recognition motif domain HMMSmart IPR000504 428 500 SM00360 RNA recognition motif domain IPR000504 536 609 SM00360 RNA recognition motif domain ProfileScan IPR000504 427 514 PS50102 RNA recognition motif domain IPR000504 535 613 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001171608 684 610606 100.0 100.0 XP_005269687 684 610606 100.0 100.0 XP_011537817 692 610606 98.7 100.0 XP_011537822 598 610606 87.4 100.0 NP_001170855 999 610605 62.8 94.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0940 Download

>KIAA0940  2052 bp
ATGCAGGATGATTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCCCCAGCAGCAGCAG
CGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTATCCGAAGCCCCGTCCACGCCCCTC
TCCTCAGAGACCCCCAAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGCCCAGCCGCT
GCCCCCCCGGCCCCCAACGGCCCGGACAAGATGCAGATGGAATCACCGCTCCTGCCAGGC
TTGAGTTTCCATCAGCCTCCTCAGCAGCCGCCGCCGCCTCAGGAGCCCGCGGCACCGGGC
GCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAG
GACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCG
CACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACC
CAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCCAGCGCAG
CCACCACAGGCGCAGCCCCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCCAGGCGCCC
TACGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCG
TCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCCTCGTCC
AGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGC
GGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGGTCGGTGTGGGCGTGGGTGTGGGTGTC
GGGGTGCCTTCCCCGCTCAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAGCAACGTG
ATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGAT
AACGCTTTCCGGACCGATAATGGTAACAATCTGTTGCCATTTCAGGACCGGAGTAGGCCC
TATGATACTTTTAACTTGCACTCGTTGGAGAACTCCTTAATGGATATGATAAGGACTGAT
CATGAACCTCTGAAAGGACGCATGGGGATAAATTTCCATCATCCAGGAACAGATAATATT
ATGGCACTTAACAGTCGATCTTCTCTCTTTCCCTTTGAAGATGCCTTCCTGGATGATAGC
CATGGTGATCAAGCCTTGTCATCTGGCTTAAGTTCTCCCACTCGCTGTCAAAATGGGGAA
CGAGTAGAACGCTACTCTAGAAAGGTGTTTGTTGGAGGACTTCCTCCTGATATTGATGAA
GATGAGATCACTGCCAGCTTTCGCAGGTTTGGACCTCTCGTAGTAGACTGGCCTCACAAA
GCTGAAAGCAAGTCTTATTTTCCTCCTAAAGGCTATGCCTTTCTGCTGTTCCAAGAGGAA
AGCTCAGTACAAGCTTTGATAGATGCCTGCCTAGAAGAAGATGGGAAACTCTACCTGTGT
GTGTCAAGCCCCACCATCAAGGACAAGCCAGTGCAAATTCGACCATGGAACCTAAGTGAC
AGTGACTTTGTAATGGATGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTTGTTGGG
GGAGTTCCACGACCCCTTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTACGGT
GGTGTCTGCTATGCTGGCATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGTGCTGGC
CGCGTGGCATTCTCCAATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGCAG
CTTCAGCACAATGACATTGACAAACGGGTTGAAGTAAAGCCATATGTGCTGGATGATCAG
ATGTGTGATGAGTGCCAGGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTCTGTGCC
AACGTCACCTGTCTGCAGTATTACTGTGAATACTGCTGGGCGAGCATACATTCCCGAGCC
GGGCGGGAGTTCCACAAACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCACGTCCCG
TTCCGCTGGAGC

ORF Protein

Cloned ORF protein sequence for pF1KSDA0940 Download

>KIAA0940  684 aa
MQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPLSSETPKPEENSAVPALSPAA
APPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWSTGTTNAVE
DSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPAPQPAQPAQ
PPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSASS
SWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSNV
IAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRTD
HEPLKGRMGINFHHPGTDNIMALNSRSSLFPFEDAFLDDSHGDQALSSGLSSPTRCQNGE
RVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEE
SSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVG
GVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQ
LQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRA
GREFHKPLVKEGGDRPRHVPFRWS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0940 Download

>pF1KSDA0940  5191 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGCAGGATGATTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCCCCAGCAG
CAGCAGCGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTATCCGAAGCCCCGTCCACG
CCCCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGCCCA
GCCGCTGCCCCCCCGGCCCCCAACGGCCCGGACAAGATGCAGATGGAATCACCGCTCCTG
CCAGGCTTGAGTTTCCATCAGCCTCCTCAGCAGCCGCCGCCGCCTCAGGAGCCCGCGGCA
CCGGGCGCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCG
GTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAAC
TTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCG
CAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCCA
GCGCAGCCACCACAGGCGCAGCCCCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCCAG
GCGCCCTACGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGC
AAGCCGTCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCC
TCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCC
TGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGGTCGGTGTGGGCGTGGGTGTG
GGTGTCGGGGTGCCTTCCCCGCTCAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAGC
AACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATG
GAGGATAACGCTTTCCGGACCGATAATGGTAACAATCTGTTGCCATTTCAGGACCGGAGT
AGGCCCTATGATACTTTTAACTTGCACTCGTTGGAGAACTCCTTAATGGATATGATAAGG
ACTGATCATGAACCTCTGAAAGGACGCATGGGGATAAATTTCCATCATCCAGGAACAGAT
AATATTATGGCACTTAACAGTCGATCTTCTCTCTTTCCCTTTGAAGATGCCTTCCTGGAT
GATAGCCATGGTGATCAAGCCTTGTCATCTGGCTTAAGTTCTCCCACTCGCTGTCAAAAT
GGGGAACGAGTAGAACGCTACTCTAGAAAGGTGTTTGTTGGAGGACTTCCTCCTGATATT
GATGAAGATGAGATCACTGCCAGCTTTCGCAGGTTTGGACCTCTCGTAGTAGACTGGCCT
CACAAAGCTGAAAGCAAGTCTTATTTTCCTCCTAAAGGCTATGCCTTTCTGCTGTTCCAA
GAGGAAAGCTCAGTACAAGCTTTGATAGATGCCTGCCTAGAAGAAGATGGGAAACTCTAC
CTGTGTGTGTCAAGCCCCACCATCAAGGACAAGCCAGTGCAAATTCGACCATGGAACCTA
AGTGACAGTGACTTTGTAATGGATGGTTCTCAGCCTTTGGACCCCAGAAAAACTATCTTT
GTTGGGGGAGTTCCACGACCCCTTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTG
TACGGTGGTGTCTGCTATGCTGGCATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGT
GCTGGCCGCGTGGCATTCTCCAATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGTTTT
GTGCAGCTTCAGCACAATGACATTGACAAACGGGTTGAAGTAAAGCCATATGTGCTGGAT
GATCAGATGTGTGATGAGTGCCAGGGCACACGCTGTGGTGGGAAGTTTGCCCCGTTCTTC
TGTGCCAACGTCACCTGTCTGCAGTATTACTGTGAATACTGCTGGGCGAGCATACATTCC
CGAGCCGGGCGGGAGTTCCACAAACCGCTGGTGAAGGAGGGAGGCGACCGCCCTCGTCAC
GTCCCGTTCCGCTGGAGCTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAG
GCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAA
GGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTC
CGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACA
GGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCG
ACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCT
CATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGT
GTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAG
TCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGC
AGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTAC
ACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGA
GTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGC
AAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACG
GGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCA
AAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGG
CCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTA
ATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGA
TTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGC
TGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGC
CCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGAT
CGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAG
AATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTG
AAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAG
GCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTT
GTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAA
GCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAA
GCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTT
TCTAAATACATTCAAATATGTATCCGCTCAT