FEM1B ORF clone pF1KSDA0396

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Flexi ORF Clone pF1KSDA0396

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Clone info.

Species

human

Clone Name

pF1KSDA0396 Sequence (with vector) Restriction Map

Product ID

FXC01595

HaloTag Clone PID

FHC01595

ORF Sequence

DNA sequence (1881 bp)
Protein sequence (627 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383873]

Gene

KIAA0396

Symbol

FEM1B

Alias : F1A-ALPHA, F1AA, FEM1-beta

Description

fem-1 homolog b (C. elegans)

Original Clone ID

hg00180s1

Features of the cloned ORF sequence

Description

Length: 1881 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 627 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10228.1 1.1e-205 100.0 FEM1B CCDS4118.1 1.9e-65 40.7 FEM1C CCDS12135.1 8.1e-29 35.8 FEM1A CCDS6121.1 3e-12 36.4 ANK1 CCDS6119.1 3e-12 36.4 ANK1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan NULL 187 202 PR01415 NULL NULL 514 528 PR01415 NULL HMMPfam IPR002110 48 68 PF00023 Ankyrin repeat IPR002110 87 118 PF00023 Ankyrin repeat IPR002110 123 152 PF00023 Ankyrin repeat IPR002110 154 183 PF00023 Ankyrin repeat IPR002110 187 209 PF00023 Ankyrin repeat IPR002110 484 530 PF00023 Ankyrin repeat HMMSmart IPR002110 45 74 SM00248 Ankyrin repeat IPR002110 87 116 SM00248 Ankyrin repeat IPR002110 120 149 SM00248 Ankyrin repeat IPR002110 153 182 SM00248 Ankyrin repeat IPR002110 186 215 SM00248 Ankyrin repeat IPR002110 218 246 SM00248 Ankyrin repeat IPR002110 483 527 SM00248 Ankyrin repeat IPR002110 531 570 SM00248 Ankyrin repeat ProfileScan IPR002110 45 68 PS50088 Ankyrin repeat IPR020683 45 241 PS50297 Ankyrin repeat-containing domain IPR002110 87 119 PS50088 Ankyrin repeat IPR002110 120 152 PS50088 Ankyrin repeat IPR002110 153 185 PS50088 Ankyrin repeat IPR002110 186 218 PS50088 Ankyrin repeat IPR002110 483 530 PS50088 Ankyrin repeat IPR020683 483 577 PS50297 Ankyrin repeat-containing domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056137 627 613539 100.0 100.0 XP_005272092 617 608767 40.7 98.9 NP_064562 617 608767 40.7 98.9 NP_061178 669 613538 35.8 96.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0396 Download

>KIAA0396  1881 bp
ATGGAGGGCCTGGCTGGCTATGTATACAAGGCGGCCAGCGAGGGCAAGGTGCTGACTCTG
GCCGCCTTGCTTCTCAACCGGTCTGAAAGCGACATCCGCTATCTGCTTGGCTATGTCAGC
CAGCAGGGAGGGCAGCGCTCCACGCCCCTCATCATCGCAGCCCGCAATGGACACGCAAAG
GTGGTACGCTTGCTCTTAGAACATTACCGGGTGCAGACTCAGCAGACTGGCACCGTCCGC
TTCGACGGGTATGTCATTGATGGTGCCACTGCTCTTTGGTGTGCAGCTGGAGCAGGACAT
TTTGAAGTTGTTAAACTTCTAGTCAGCCATGGAGCCAACGTGAACCATACCACAGTAACT
AATTCAACCCCCCTGCGGGCAGCATGCTTTGATGGCAGACTGGACATTGTGAAATACTTG
GTTGAAAATAATGCCAACATCAGCATTGCCAACAAATATGACAACACCTGCCTAATGATT
GCGGCATATAAGGGACACACTGATGTGGTCAGATACCTTTTAGAACAACGTGCTGATCCC
AATGCCAAAGCACATTGTGGAGCCACAGCATTGCACTTTGCAGCTGAAGCTGGGCACATA
GATATTGTGAAAGAGCTGATAAAATGGCGTGCTGCTATAGTAGTGAATGGCCATGGGATG
ACGCCATTGAAAGTAGCTGCCGAAAGCTGTAAAGCTGATGTCGTAGAACTGTTACTCTCT
CATGCTGATTGCGACCGAAGAAGTCGGATTGAAGCTTTGGAACTCTTGGGTGCCTCCTTT
GCAAATGACCGTGAGAACTATGACATCATAAAGACATACCACTATCTATATTTAGCCATG
TTAGAGAGGTTCCAAGATGGTGATAACATTCTCGAAAAAGAGGTTCTTCCACCAATCCAT
GCTTATGGGAATAGAACTGAATGTAGAAATCCTCAGGAACTGGAGTCCATTCGGCAAGAC
AGAGATGCTCTTCATATGGAAGGCCTTATAGTTCGGGAACGGATTTTAGGTGCTGACAAT
ATTGATGTTTCTCATCCCATCATTTACAGAGGAGCTGTTTATGCGGATAATATGGAATTT
GAGCAGTGTATCAAGTTGTGGCTTCATGCCCTGCACCTCAGACAAAAAGGTAACAGGAAC
ACCCACAAGGATCTTCTTCGATTTGCTCAAGTTTTCTCACAAATGATACATTTGAATGAA
ACTGTGAAGGCCCCAGACATAGAATGTGTTTTGAGATGCAGTGTTTTGGAAATAGAACAA
AGTATGAACAGAGTGAAAAATATTTCAGATGCTGATGTCCACAATGCTATGGACAATTAT
GAATGTAATCTCTATACCTTTCTGTATTTAGTGTGCATCTCTACCAAAACACAGTGCAGC
GAAGAAGATCAGTGCAAAATTAACAAGCAGATCTACAACCTGATTCACCTTGATCCCAGA
ACTCGTGAAGGTTTCACCTTGCTGCATCTGGCTGTCAACTCCAATACTCCAGTTGATGAT
TTCCACACCAATGACGTCTGCAGCTTTCCAAATGCACTTGTCACAAAGCTCCTGCTGGAC
TGTGGTGCTGAGGTGAATGCCGTGGACAATGAGGGAAACAGTGCCCTTCATATTATCGTT
CAGTACAACAGGCCCATCAGTGATTTTTTGACCTTGCACTCCATCATCATTAGCCTAGTT
GAAGCCGGAGCTCACACTGACATGACGAATAAACAGAATAAGACTCCGCTAGACAAAAGT
ACAACTGGGGTATCTGAAATACTGCTTAAAACTCAAATGAAGATGAGTCTCAAGTGCCTG
GCTGCCCGAGCAGTTCGGGCTAATGACATTAACTACCAAGACCAGATCCCCAGAACTCTT
GAAGAGTTTGTTGGATTTCAT

ORF Protein

Cloned ORF protein sequence for pF1KSDA0396 Download

>KIAA0396  627 aa
MEGLAGYVYKAASEGKVLTLAALLLNRSESDIRYLLGYVSQQGGQRSTPLIIAARNGHAK
VVRLLLEHYRVQTQQTGTVRFDGYVIDGATALWCAAGAGHFEVVKLLVSHGANVNHTTVT
NSTPLRAACFDGRLDIVKYLVENNANISIANKYDNTCLMIAAYKGHTDVVRYLLEQRADP
NAKAHCGATALHFAAEAGHIDIVKELIKWRAAIVVNGHGMTPLKVAAESCKADVVELLLS
HADCDRRSRIEALELLGASFANDRENYDIIKTYHYLYLAMLERFQDGDNILEKEVLPPIH
AYGNRTECRNPQELESIRQDRDALHMEGLIVRERILGADNIDVSHPIIYRGAVYADNMEF
EQCIKLWLHALHLRQKGNRNTHKDLLRFAQVFSQMIHLNETVKAPDIECVLRCSVLEIEQ
SMNRVKNISDADVHNAMDNYECNLYTFLYLVCISTKTQCSEEDQCKINKQIYNLIHLDPR
TREGFTLLHLAVNSNTPVDDFHTNDVCSFPNALVTKLLLDCGAEVNAVDNEGNSALHIIV
QYNRPISDFLTLHSIIISLVEAGAHTDMTNKQNKTPLDKSTTGVSEILLKTQMKMSLKCL
AARAVRANDINYQDQIPRTLEEFVGFH

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0396 Download

>pF1KSDA0396  5018 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGAGGGCCTGGCTGGCTATGTATACAAGGCGGCCAGCGAGGGCAAGGTGCTG
ACTCTGGCCGCCTTGCTTCTCAACCGGTCTGAAAGCGACATCCGCTATCTGCTTGGCTAT
GTCAGCCAGCAGGGAGGGCAGCGCTCCACGCCCCTCATCATCGCAGCCCGCAATGGACAC
GCAAAGGTGGTACGCTTGCTCTTAGAACATTACCGGGTGCAGACTCAGCAGACTGGCACC
GTCCGCTTCGACGGGTATGTCATTGATGGTGCCACTGCTCTTTGGTGTGCAGCTGGAGCA
GGACATTTTGAAGTTGTTAAACTTCTAGTCAGCCATGGAGCCAACGTGAACCATACCACA
GTAACTAATTCAACCCCCCTGCGGGCAGCATGCTTTGATGGCAGACTGGACATTGTGAAA
TACTTGGTTGAAAATAATGCCAACATCAGCATTGCCAACAAATATGACAACACCTGCCTA
ATGATTGCGGCATATAAGGGACACACTGATGTGGTCAGATACCTTTTAGAACAACGTGCT
GATCCCAATGCCAAAGCACATTGTGGAGCCACAGCATTGCACTTTGCAGCTGAAGCTGGG
CACATAGATATTGTGAAAGAGCTGATAAAATGGCGTGCTGCTATAGTAGTGAATGGCCAT
GGGATGACGCCATTGAAAGTAGCTGCCGAAAGCTGTAAAGCTGATGTCGTAGAACTGTTA
CTCTCTCATGCTGATTGCGACCGAAGAAGTCGGATTGAAGCTTTGGAACTCTTGGGTGCC
TCCTTTGCAAATGACCGTGAGAACTATGACATCATAAAGACATACCACTATCTATATTTA
GCCATGTTAGAGAGGTTCCAAGATGGTGATAACATTCTCGAAAAAGAGGTTCTTCCACCA
ATCCATGCTTATGGGAATAGAACTGAATGTAGAAATCCTCAGGAACTGGAGTCCATTCGG
CAAGACAGAGATGCTCTTCATATGGAAGGCCTTATAGTTCGGGAACGGATTTTAGGTGCT
GACAATATTGATGTTTCTCATCCCATCATTTACAGAGGAGCTGTTTATGCGGATAATATG
GAATTTGAGCAGTGTATCAAGTTGTGGCTTCATGCCCTGCACCTCAGACAAAAAGGTAAC
AGGAACACCCACAAGGATCTTCTTCGATTTGCTCAAGTTTTCTCACAAATGATACATTTG
AATGAAACTGTGAAGGCCCCAGACATAGAATGTGTTTTGAGATGCAGTGTTTTGGAAATA
GAACAAAGTATGAACAGAGTGAAAAATATTTCAGATGCTGATGTCCACAATGCTATGGAC
AATTATGAATGTAATCTCTATACCTTTCTGTATTTAGTGTGCATCTCTACCAAAACACAG
TGCAGCGAAGAAGATCAGTGCAAAATTAACAAGCAGATCTACAACCTGATTCACCTTGAT
CCCAGAACTCGTGAAGGTTTCACCTTGCTGCATCTGGCTGTCAACTCCAATACTCCAGTT
GATGATTTCCACACCAATGACGTCTGCAGCTTTCCAAATGCACTTGTCACAAAGCTCCTG
CTGGACTGTGGTGCTGAGGTGAATGCCGTGGACAATGAGGGAAACAGTGCCCTTCATATT
ATCGTTCAGTACAACAGGCCCATCAGTGATTTTTTGACCTTGCACTCCATCATCATTAGC
CTAGTTGAAGCCGGAGCTCACACTGACATGACGAATAAACAGAATAAGACTCCGCTAGAC
AAAAGTACAACTGGGGTATCTGAAATACTGCTTAAAACTCAAATGAAGATGAGTCTCAAG
TGCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTAACTACCAAGACCAGATCCCCAGA
ACTCTTGAAGAGTTTGTTGGATTTCATTACGTAGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT