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SpecieshumanProduct IDFXC03970Cloning SiteSgfI-PmeIGeneKIEE0687SymbolCCKAR
Alias : CCK-A, CCK1-R, CCK1R, CCKRADescriptioncholecystokinin A receptorOriginal Clone IDcs02187
Length: 1284 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 428 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS3438.1 1.2e-141 100.0 CCKAR CCDS7761.1 8.7e-59 50.4 CCKBR CCDS81550.1 4.8e-35 49.4 CCKBR CCDS3552.1 2e-17 28.9 NPFFR2 CCDS47072.1 2e-17 28.9 NPFFR2
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR000596 20 40 PR00524 Cholecystokinin receptor IPR000276 43 67 PR00237 GPCR IPR000276 76 97 PR00237 GPCR IPR009126 94 110 PR01822 Cholecystokinin receptor IPR000276 121 143 PR00237 GPCR IPR009126 144 158 PR01822 Cholecystokinin receptor IPR000276 157 178 PR00237 GPCR IPR000596 180 198 PR00524 Cholecystokinin receptor IPR000276 210 233 PR00237 GPCR IPR009126 229 243 PR01822 Cholecystokinin receptor IPR000596 240 259 PR00524 Cholecystokinin receptor IPR009126 263 272 PR01822 Cholecystokinin receptor IPR000596 270 286 PR00524 Cholecystokinin receptor IPR000596 292 308 PR00524 Cholecystokinin receptor IPR009126 303 314 PR01822 Cholecystokinin receptor IPR000276 311 335 PR00237 GPCR IPR009126 328 337 PR01822 Cholecystokinin receptor IPR009126 337 354 PR01822 Cholecystokinin receptor IPR000276 352 378 PR00237 GPCR IPR000596 389 402 PR00524 Cholecystokinin receptor IPR000596 403 414 PR00524 Cholecystokinin receptor IPR009126 411 422 PR01822 Cholecystokinin receptor HMMPfam IPR015276 1 47 PF09193 Cholecystokinin A receptor IPR000276 58 370 PF00001 GPCR ProfileScan IPR017452 58 370 PS50262 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 43 VQILLYSLIFLLSVLGNTLVITV 65 PRIMARY 23 2 76 TNIFLLSLAVSDLMLCLFCMPFN 98 PRIMARY 23 3 119 YFMGTSVSVSTFNLVAISLERYG 141 SECONDARY 23 4 163 AATWCLSFTIMTPYPIYSNLVPF 185 SECONDARY 23 5 213 LLLILFLIPGIVMMVAYGLISLE 235 PRIMARY 23 6 312 IRMLIVIVVLFFLCWMPIFSANA 334 PRIMARY 23 7 348 SGTPISFILLLSYTSSCVNPIIY 370 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000721 428 118444 100.0 100.0 NP_795344 447 118445 50.4 93.5 XP_016874005 381 118445 51.3 87.1 XP_005253267 516 118445 43.5 83.6 NP_071429 430 607448 31.5 85.5 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KE0687 Download>KIEE0687 1284 bp ATGGATGTGGTTGACAGCCTTCTTGTGAATGGAAGCAACATCACTCCTCCCTGTGAACTC GGGCTCGAAAATGAGACGCTTTTCTGCTTGGATCAGCCCCGTCCTTCCAAAGAGTGGCAG CCAGCGGTGCAGATTCTCTTGTACTCCTTGATATTCCTGCTCAGCGTGCTGGGAAACACG CTGGTCATCACCGTGCTGATTCGGAACAAGCGGATGCGGACGGTCACCAACATCTTCCTC CTCTCCCTGGCTGTCAGCGACCTCATGCTCTGTCTCTTCTGCATGCCGTTCAACCTCATC CCCAATCTGCTCAAGGATTTCATCTTCGGGAGCGCCGTTTGCAAGACCACCACCTACTTC ATGGGCACCTCTGTGAGTGTATCTACCTTTAATCTGGTAGCCATATCTCTAGAGAGATAT GGTGCGATTTGCAAACCCTTACAGTCCCGGGTCTGGCAGACAAAATCCCATGCTTTGAAG GTGATTGCTGCTACCTGGTGCCTTTCCTTTACCATCATGACTCCGTACCCCATTTATAGC AACTTGGTGCCTTTTACCAAAAATAACAACCAGACCGCGAATATGTGCCGCTTTCTACTG CCAAATGATGTTATGCAGCAGTCCTGGCACACATTCCTGTTACTCATCCTCTTTCTTATT CCTGGAATTGTGATGATGGTGGCATATGGATTAATCTCTTTGGAACTCTACCAGGGAATA AAATTTGAGGCTAGCCAGAAGAAGTCTGCTAAAGAAAGGAAACCTAGCACCACCAGCAGC GGCAAATATGAGGACAGCGATGGGTGTTACCTGCAAAAGACCAGGCCCCCGAGGAAGCTG GAGCTCCGGCAGCTGTCCACCGGCAGCAGCAGCAGGGCCAACCGCATCCGGAGTAACAGC TCCGCAGCCAACCTGATGGCCAAGAAAAGGGTGATCCGCATGCTCATCGTCATCGTGGTC CTCTTCTTCCTGTGCTGGATGCCCATCTTCAGCGCCAACGCCTGGCGGGCCTACGACACC GCCTCCGCAGAGCGCCGCCTCTCAGGAACCCCCATTTCCTTCATCCTCCTCCTGTCCTAC ACCTCCTCCTGCGTCAACCCCATCATCTACTGCTTCATGAACAAACGCTTCCGCCTCGGC TTCATGGCCACCTTCCCCTGCTGCCCCAATCCTGGTCCCCCAGGGGCGAGGGGAGAGGTG GGGGAGGAGGAGGAAGGCGGGACCACAGGAGCCTCTCTGTCCAGGTTCTCGTACAGCCAT ATGAGTGCCTCGGTGCCACCCCAG
Cloned ORF protein sequence for pF1KE0687 Download>KIEE0687 428 aa MDVVDSLLVNGSNITPPCELGLENETLFCLDQPRPSKEWQPAVQILLYSLIFLLSVLGNT LVITVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFNLIPNLLKDFIFGSAVCKTTTYF MGTSVSVSTFNLVAISLERYGAICKPLQSRVWQTKSHALKVIAATWCLSFTIMTPYPIYS NLVPFTKNNNQTANMCRFLLPNDVMQQSWHTFLLLILFLIPGIVMMVAYGLISLELYQGI KFEASQKKSAKERKPSTTSSGKYEDSDGCYLQKTRPPRKLELRQLSTGSSSRANRIRSNS SAANLMAKKRVIRMLIVIVVLFFLCWMPIFSANAWRAYDTASAERRLSGTPISFILLLSY TSSCVNPIIYCFMNKRFRLGFMATFPCCPNPGPPGARGEVGEEEEGGTTGASLSRFSYSH MSASVPPQ
Nucleotide Sequence (with vector) for pF1KE0687 Download>pF1KE0687 4397 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATGTGGTT GACAGCCTTCTTGTGAATGGAAGCAACATCACTCCTCCCTGTGAACTCGGGCTCGAAAAT GAGACGCTTTTCTGCTTGGATCAGCCCCGTCCTTCCAAAGAGTGGCAGCCAGCGGTGCAG ATTCTCTTGTACTCCTTGATATTCCTGCTCAGCGTGCTGGGAAACACGCTGGTCATCACC GTGCTGATTCGGAACAAGCGGATGCGGACGGTCACCAACATCTTCCTCCTCTCCCTGGCT GTCAGCGACCTCATGCTCTGTCTCTTCTGCATGCCGTTCAACCTCATCCCCAATCTGCTC AAGGATTTCATCTTCGGGAGCGCCGTTTGCAAGACCACCACCTACTTCATGGGCACCTCT GTGAGTGTATCTACCTTTAATCTGGTAGCCATATCTCTAGAGAGATATGGTGCGATTTGC AAACCCTTACAGTCCCGGGTCTGGCAGACAAAATCCCATGCTTTGAAGGTGATTGCTGCT ACCTGGTGCCTTTCCTTTACCATCATGACTCCGTACCCCATTTATAGCAACTTGGTGCCT TTTACCAAAAATAACAACCAGACCGCGAATATGTGCCGCTTTCTACTGCCAAATGATGTT ATGCAGCAGTCCTGGCACACATTCCTGTTACTCATCCTCTTTCTTATTCCTGGAATTGTG ATGATGGTGGCATATGGATTAATCTCTTTGGAACTCTACCAGGGAATAAAATTTGAGGCT AGCCAGAAGAAGTCTGCTAAAGAAAGGAAACCTAGCACCACCAGCAGCGGCAAATATGAG GACAGCGATGGGTGTTACCTGCAAAAGACCAGGCCCCCGAGGAAGCTGGAGCTCCGGCAG CTGTCCACCGGCAGCAGCAGCAGGGCCAACCGCATCCGGAGTAACAGCTCCGCAGCCAAC CTGATGGCCAAGAAAAGGGTGATCCGCATGCTCATCGTCATCGTGGTCCTCTTCTTCCTG TGCTGGATGCCCATCTTCAGCGCCAACGCCTGGCGGGCCTACGACACCGCCTCCGCAGAG CGCCGCCTCTCAGGAACCCCCATTTCCTTCATCCTCCTCCTGTCCTACACCTCCTCCTGC GTCAACCCCATCATCTACTGCTTCATGAACAAACGCTTCCGCCTCGGCTTCATGGCCACC TTCCCCTGCTGCCCCAATCCTGGTCCCCCAGGGGCGAGGGGAGAGGTGGGGGAGGAGGAG GAAGGCGGGACCACAGGAGCCTCTCTGTCCAGGTTCTCGTACAGCCATATGAGTGCCTCG GTGCCACCCCAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA AATATGTATCCGCTCAT
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