PABPC1L2A ORF clone pF1KE0631

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KE0631

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Clone info.

Species

human

Clone Name

pF1KE0631 Sequence (with vector) Restriction Map

Product ID

FXC11208

HaloTag Clone PID

FHC11208

ORF Sequence

DNA sequence (600 bp)
Protein sequence (200 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528886]

Gene

KIEE0631

Symbol

PABPC1L2A

Alias : RBM32A

Description

poly(A) binding protein, cytoplasmic 1-like 2A

Original Clone ID

cs02131

Features of the cloned ORF sequence

Description

Length: 600 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 200 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43972.1 1.1e-63 100.0 PABPC1L2B CCDS35334.1 1.1e-63 100.0 PABPC1L2A CCDS6289.1 3.7e-50 80.1 PABPC1 CCDS44114.1 1.7e-48 76.6 PABPC4 CCDS438.1 1.7e-48 76.6 PABPC4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 4 74 PF00076 RNA recognition motif domain IPR000504 92 159 PF00076 RNA recognition motif domain HMMSmart IPR000504 3 76 SM00360 RNA recognition motif domain IPR000504 91 162 SM00360 RNA recognition motif domain ProfileScan IPR000504 2 80 PS50102 RNA recognition motif domain IPR000504 90 166 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002559 636 604679 80.1 98.0 XP_005250918 636 604679 80.1 98.0 NP_001129126 631 603407 76.6 98.5 NP_003810 644 603407 76.6 98.5 NP_001129125 660 603407 76.6 98.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0631 Download

>KIEE0631  600 bp
ATGGCCTCCCTGTACGTGGGCGACCTGCACCCTGAGGTGACCGAGGCAATGCTGTACGAG
AAGTTCAGTCCAGCTGGGCCCATCCTCTCCATCCGCATCTGCAGGGACAAGATCACCCGC
CGCTCATTGGGCTACGCGTATGTCAACTACCAGCAACCGGTGGACGCCAAGCGGGCCCTG
GAGACCCTGAACTTTGATGTCATAAAGGGCAGGCCAGTGCGCATCATGTGGTCCCAGAGG
GACCCGTCGCTCCGCAAGAGCGGGGTGGGCAACGTCTTCATCAAGAACCTGGGCAAGACC
ATCGACAACAAGGCGCTGTACAACATCTTCTCGGCGTTCGGCAACATCCTCTCCTGCAAA
GTGGCCTGTGACGAAAAGGGGCCCAAGGGCTACGGGTTCGTGCACTTCCAAAAGCAGGAA
TCTGCGGAGCGGGCCATCGATGTGATGAATGGCATGTTCCTGAACTACCGCAAAATTTTC
GTCGGGAGATTCAAGTCGCATAAAGAACGAGAGGCCGAAAGGGGAGCCTGGGCCAGGCAG
TCCACTAGTGCTGACGTCAAGGATTTCGAGGAAGACACCGACGAGGAGGCCACCTTGCGA

ORF Protein

Cloned ORF protein sequence for pF1KE0631 Download

>KIEE0631  200 aa
MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL
ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCK
VACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ
STSADVKDFEEDTDEEATLR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0631 Download

>pF1KE0631  3713 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCTCCCTG
TACGTGGGCGACCTGCACCCTGAGGTGACCGAGGCAATGCTGTACGAGAAGTTCAGTCCA
GCTGGGCCCATCCTCTCCATCCGCATCTGCAGGGACAAGATCACCCGCCGCTCATTGGGC
TACGCGTATGTCAACTACCAGCAACCGGTGGACGCCAAGCGGGCCCTGGAGACCCTGAAC
TTTGATGTCATAAAGGGCAGGCCAGTGCGCATCATGTGGTCCCAGAGGGACCCGTCGCTC
CGCAAGAGCGGGGTGGGCAACGTCTTCATCAAGAACCTGGGCAAGACCATCGACAACAAG
GCGCTGTACAACATCTTCTCGGCGTTCGGCAACATCCTCTCCTGCAAAGTGGCCTGTGAC
GAAAAGGGGCCCAAGGGCTACGGGTTCGTGCACTTCCAAAAGCAGGAATCTGCGGAGCGG
GCCATCGATGTGATGAATGGCATGTTCCTGAACTACCGCAAAATTTTCGTCGGGAGATTC
AAGTCGCATAAAGAACGAGAGGCCGAAAGGGGAGCCTGGGCCAGGCAGTCCACTAGTGCT
GACGTCAAGGATTTCGAGGAAGACACCGACGAGGAGGCCACCTTGCGAGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC
AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT
GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG
TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC
CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC
TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT
CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT
ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC
AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA
GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA
GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG
TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA
AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG
GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT