SEC61A1 ORF clone pF1KE0592

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Flexi ORF Clone pF1KE0592

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Clone info.

Species

human

Clone Name

pF1KE0592 Sequence (with vector) Restriction Map

Product ID

FXC11190

HaloTag Clone PID

FHC11190

ORF Sequence

DNA sequence (1428 bp)
Protein sequence (476 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528869]

Gene

KIEE0592

Symbol

SEC61A1

Alias : ADTKD5, HNFJ4, HSEC61, SEC61, SEC61A

Description

Sec61 translocon alpha 1 subunit

Original Clone ID

oc01292

Features of the cloned ORF sequence

Description

Length: 1428 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 476 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3046.1 1.2e-208 100.0 SEC61A1 CCDS7088.1 6.5e-200 93.5 SEC61A2 CCDS44359.1 8.4e-179 89.1 SEC61A2 CCDS44358.1 3.2e-174 93.3 SEC61A2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019561 40 74 PF10559 Translocon Sec61/SecY IPR002208 75 459 PF00344 SecY protein HMMTigr IPR002208 29 465 TIGR00967 SecY protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MAIKFLEVIKPFCVILPEIQKPE 23 SECONDARY 23 2 33 LWTAITLFIFLVCCQIPLFGIMS 55 PRIMARY 23 3 72 NRGTLMELGISPIVTSGLIMQLL 94 SECONDARY 23 4 117 KLFGMIITIGQSIVYVMTGMYG 138 SECONDARY 22 5 145 AGICLLITIQLFVAGLIVLLLDE 167 PRIMARY 23 6 171 KGYGLGSGISLFIATNICETIVW 193 SECONDARY 23 7 239 LPNLMNLIATIFVFAVVIYFQGF 261 PRIMARY 23 8 286 TSNIPIILQSALVSNLYVISQML 308 SECONDARY 23 9 363 VYIVFMLGSCAFFSKTWIEVSGS 385 SECONDARY 23 10 428 IGALSVLADFLGAIGSGTGILLA 450 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_037468 476 609213,617056 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0592 Download

>KIEE0592  1428 bp
ATGGCAATCAAATTTCTGGAAGTCATCAAGCCCTTCTGTGTCATCCTGCCGGAAATTCAG
AAGCCAGAGAGGAAGATTCAGTTTAAGGAGAAAGTGCTGTGGACCGCTATCACCCTCTTT
ATCTTCTTAGTGTGCTGCCAGATTCCCCTGTTTGGGATCATGTCTTCAGATTCAGCTGAC
CCTTTCTATTGGATGAGAGTGATTCTAGCCTCTAACAGAGGCACATTGATGGAGCTAGGG
ATCTCTCCTATTGTCACGTCTGGCCTTATAATGCAACTCTTGGCTGGCGCCAAGATAATT
GAAGTTGGTGACACCCCAAAAGACCGAGCTCTCTTCAACGGAGCCCAAAAGTTATTTGGC
ATGATCATTACTATCGGCCAGTCTATCGTGTATGTGATGACCGGGATGTATGGGGACCCT
TCTGAAATGGGTGCTGGAATTTGCCTGCTAATCACCATTCAGCTCTTTGTTGCTGGCTTA
ATTGTCCTACTTTTGGATGAACTCCTGCAAAAAGGATATGGCCTTGGCTCTGGTATTTCT
CTCTTCATTGCAACTAACATCTGTGAAACCATCGTATGGAAGGCATTCAGCCCCACTACT
GTCAACACTGGCCGAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTG
GCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCC
AACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGGC
TTCCGAGTGGACCTGCCAATCAAGTCGGCCCGCTACCGTGGCCAGTACAACACCTATCCC
ATCAAGCTCTTCTATACGTCCAACATCCCCATCATCCTGCAGTCTGCCCTGGTGTCCAAC
CTTTATGTCATCTCCCAAATGCTCTCAGCTCGCTTCAGTGGCAACTTGCTGGTCAGCCTG
CTGGGCACCTGGTCGGACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTTGGTGGC
CTTTGCTATTACCTGTCCCCTCCAGAATCTTTTGGCTCCGTGTTAGAAGACCCGGTCCAT
GCAGTTGTATACATAGTGTTCATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATT
GAGGTCTCAGGTTCCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCAGATGGTG
ATGAGAGGCCACCGAGAGACCTCCATGGTCCATGAACTCAACCGGTACATCCCCACAGCC
GCGGCCTTTGGTGGGCTGTGCATCGGGGCCCTCTCGGTCCTGGCTGACTTCCTAGGCGCC
ATTGGGTCTGGAACCGGGATCCTGCTCGCAGTCACAATCATCTACCAGTACTTTGAGATC
TTCGTTAAGGAGCAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCTTC

ORF Protein

Cloned ORF protein sequence for pF1KE0592 Download

>KIEE0592  476 aa
MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSAD
PFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFG
MIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGIS
LFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP
NLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN
LYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVH
AVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0592 Download

>pF1KE0592  4541 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAATCAAA
TTTCTGGAAGTCATCAAGCCCTTCTGTGTCATCCTGCCGGAAATTCAGAAGCCAGAGAGG
AAGATTCAGTTTAAGGAGAAAGTGCTGTGGACCGCTATCACCCTCTTTATCTTCTTAGTG
TGCTGCCAGATTCCCCTGTTTGGGATCATGTCTTCAGATTCAGCTGACCCTTTCTATTGG
ATGAGAGTGATTCTAGCCTCTAACAGAGGCACATTGATGGAGCTAGGGATCTCTCCTATT
GTCACGTCTGGCCTTATAATGCAACTCTTGGCTGGCGCCAAGATAATTGAAGTTGGTGAC
ACCCCAAAAGACCGAGCTCTCTTCAACGGAGCCCAAAAGTTATTTGGCATGATCATTACT
ATCGGCCAGTCTATCGTGTATGTGATGACCGGGATGTATGGGGACCCTTCTGAAATGGGT
GCTGGAATTTGCCTGCTAATCACCATTCAGCTCTTTGTTGCTGGCTTAATTGTCCTACTT
TTGGATGAACTCCTGCAAAAAGGATATGGCCTTGGCTCTGGTATTTCTCTCTTCATTGCA
ACTAACATCTGTGAAACCATCGTATGGAAGGCATTCAGCCCCACTACTGTCAACACTGGC
CGAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACA
GACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAAT
CTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGGCTTCCGAGTGGAC
CTGCCAATCAAGTCGGCCCGCTACCGTGGCCAGTACAACACCTATCCCATCAAGCTCTTC
TATACGTCCAACATCCCCATCATCCTGCAGTCTGCCCTGGTGTCCAACCTTTATGTCATC
TCCCAAATGCTCTCAGCTCGCTTCAGTGGCAACTTGCTGGTCAGCCTGCTGGGCACCTGG
TCGGACACGTCTTCTGGGGGCCCAGCACGTGCTTATCCAGTTGGTGGCCTTTGCTATTAC
CTGTCCCCTCCAGAATCTTTTGGCTCCGTGTTAGAAGACCCGGTCCATGCAGTTGTATAC
ATAGTGTTCATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATTGAGGTCTCAGGT
TCCTCTGCCAAAGATGTTGCAAAGCAGCTGAAGGAGCAGCAGATGGTGATGAGAGGCCAC
CGAGAGACCTCCATGGTCCATGAACTCAACCGGTACATCCCCACAGCCGCGGCCTTTGGT
GGGCTGTGCATCGGGGCCCTCTCGGTCCTGGCTGACTTCCTAGGCGCCATTGGGTCTGGA
ACCGGGATCCTGCTCGCAGTCACAATCATCTACCAGTACTTTGAGATCTTCGTTAAGGAG
CAAAGCGAGGTTGGCAGCATGGGGGCCCTGCTCTTCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT