TMEM47 ORF clone pF1KE0105

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Flexi ORF Clone pF1KE0105

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Clone info.

Species

human

Clone Name

pF1KE0105 Sequence (with vector) Restriction Map

Product ID

FXC07160

HaloTag Clone PID

FHC07160

ORF Sequence

DNA sequence (543 bp)
Protein sequence (181 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528258]

Gene

KIEE0105

Symbol

TMEM47

Alias : BCMP1, TM4SF10, VAB-9

Description

transmembrane protein 47

Original Clone ID

oc00805

Features of the cloned ORF sequence

Description

Length: 543 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 181 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14235.1 1.1e-75 100.0 TMEM47 CCDS5188.1 5.5e-15 30.9 PERP The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019372 26 135 PF10242 Lipoma HMGIC fusion partner-like protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 17 TPLKLVGLVCIFLALCLDLGAVL 39 PRIMARY 23 2 81 TLALLLGGAAIILIAFLVGLISI 103 PRIMARY 23 3 119 LFAAVVLQVCSLVLYPIKFIETV 141 PRIMARY 23 4 152 GYGLAWGATIFSFGGAILYCLN 173 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_113630 181 300698 100.0 100.0 NP_071404 193 609301 30.9 95.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0105 Download

>KIEE0105  543 bp
ATGGCTTCGGCGGGCAGCGGCATGGAGGAGGTGCGCGTGTCGGTGCTGACCCCCTTGAAG
CTGGTCGGGCTGGTGTGCATCTTCCTGGCGCTGTGTCTGGACCTGGGGGCGGTGCTGAGC
CCGGCCTGGGTCACAGCTGACCACCAGTACTACCTGTCGTTGTGGGAGTCCTGCCGCAAA
CCCGCCAGCTTGGACATCTGGCACTGCGAGTCCACGCTCAGCAGCGATTGGCAGATTGCT
ACTCTGGCTTTACTCCTGGGCGGCGCTGCCATCATTCTCATTGCATTCCTGGTGGGTTTG
ATTTCTATCTGCGTGGGATCTCGAAGGCGTTTCTATAGACCTGTTGCGGTCATGCTTTTT
GCAGCAGTTGTTTTACAGGTTTGCAGCCTGGTCCTTTACCCAATCAAGTTCATTGAAACT
GTGAGCTTGAAAATTTACCATGAGTTCAACTGGGGTTATGGCCTGGCCTGGGGTGCAACT
ATATTTTCGTTTGGGGGTGCCATCCTTTATTGCCTGAACCCTAAGAACTATGAAGACTAC
TAC

ORF Protein

Cloned ORF protein sequence for pF1KE0105 Download

>KIEE0105  181 aa
MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK
PASLDIWHCESTLSSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLF
AAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY
Y

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0105 Download

>pF1KE0105  3656 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTTCGGCG
GGCAGCGGCATGGAGGAGGTGCGCGTGTCGGTGCTGACCCCCTTGAAGCTGGTCGGGCTG
GTGTGCATCTTCCTGGCGCTGTGTCTGGACCTGGGGGCGGTGCTGAGCCCGGCCTGGGTC
ACAGCTGACCACCAGTACTACCTGTCGTTGTGGGAGTCCTGCCGCAAACCCGCCAGCTTG
GACATCTGGCACTGCGAGTCCACGCTCAGCAGCGATTGGCAGATTGCTACTCTGGCTTTA
CTCCTGGGCGGCGCTGCCATCATTCTCATTGCATTCCTGGTGGGTTTGATTTCTATCTGC
GTGGGATCTCGAAGGCGTTTCTATAGACCTGTTGCGGTCATGCTTTTTGCAGCAGTTGTT
TTACAGGTTTGCAGCCTGGTCCTTTACCCAATCAAGTTCATTGAAACTGTGAGCTTGAAA
ATTTACCATGAGTTCAACTGGGGTTATGGCCTGGCCTGGGGTGCAACTATATTTTCGTTT
GGGGGTGCCATCCTTTATTGCCTGAACCCTAAGAACTATGAAGACTACTACGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT