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SpecieshumanProduct IDFXC03233Cloning SiteSgfI-PmeIGeneKIBB9671SymbolZNF83
Alias : HPF1, ZNF816BDescriptionzinc finger protein 83, transcript variant 5Original Clone IDcp00254
Length: 1548 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 516 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12854.1 1.2e-122 100.0 ZNF83 CCDS82391.1 5e-74 61.1 ZNF160 CCDS12859.1 5.2e-74 61.1 ZNF160 CCDS46172.1 7.1e-70 60.0 ZNF813 CCDS46164.1 9.4e-70 62.6 ZNF880
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR007087 121 143 PF00096 Zinc finger IPR007087 177 199 PF00096 Zinc finger IPR007087 233 255 PF00096 Zinc finger IPR007087 289 311 PF00096 Zinc finger IPR007087 317 339 PF00096 Zinc finger IPR007087 345 367 PF00096 Zinc finger IPR007087 373 395 PF00096 Zinc finger IPR007087 401 423 PF00096 Zinc finger IPR007087 457 479 PF00096 Zinc finger IPR007087 485 507 PF00096 Zinc finger HMMSmart IPR015880 93 115 SM00355 Zinc finger IPR015880 121 143 SM00355 Zinc finger IPR015880 149 171 SM00355 Zinc finger IPR015880 177 199 SM00355 Zinc finger IPR015880 205 227 SM00355 Zinc finger IPR015880 233 255 SM00355 Zinc finger IPR015880 261 283 SM00355 Zinc finger IPR015880 289 311 SM00355 Zinc finger IPR015880 317 339 SM00355 Zinc finger IPR015880 345 367 SM00355 Zinc finger IPR015880 373 395 SM00355 Zinc finger IPR015880 401 423 SM00355 Zinc finger IPR015880 429 451 SM00355 Zinc finger IPR015880 457 479 SM00355 Zinc finger IPR015880 485 507 SM00355 Zinc finger ProfileScan IPR007087 93 120 PS50157 Zinc finger IPR007087 121 148 PS50157 Zinc finger IPR007087 149 176 PS50157 Zinc finger IPR007087 177 204 PS50157 Zinc finger IPR007087 205 232 PS50157 Zinc finger IPR007087 233 260 PS50157 Zinc finger IPR007087 261 288 PS50157 Zinc finger IPR007087 289 316 PS50157 Zinc finger IPR007087 317 344 PS50157 Zinc finger IPR007087 345 372 PS50157 Zinc finger IPR007087 373 400 PS50157 Zinc finger IPR007087 401 428 PS50157 Zinc finger IPR007087 429 456 PS50157 Zinc finger IPR007087 457 484 PS50157 Zinc finger IPR007087 485 512 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001264880 516 194558 100.0 100.0 NP_001264878 516 194558 100.0 100.0 NP_001099019 516 194558 100.0 100.0 NP_001099020 516 194558 100.0 100.0 NP_001264874 516 194558 100.0 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9671 Download>KIBB9671 1548 bp ATGCATGGGAGAAAGGATGATGCACAAAAGCAGCCTGTTAAAAATCAGCTTGGATTAAAC CCGCAGTCACATCTACCAGAACTGCAGCTATTTCAAGCTGAAGGGAAAATATATAAATAT GATCACATGGAAAAATCTGTCAACAGTAGTTCCTTAGTTTCCCCACCCCAACGTATTTCT TCTACTGTCAAAACCCACATTTCTCATACATATGAATGTAATTTTGTGGATTCATTATTC ACACAAAAAGAGAAAGCAAATATTGGGACAGAACACTACAAATGTAGTGAGCGTGGCAAG GCCTTTCATCAAGGCTTACATTTTACTATACATCAAATAATCCATACTAAAGAGACGCAA TTTAAATGTGATATATGTGGCAAGATCTTCAATAAAAAATCAAACCTTGCAAGTCATCAA AGAATTCATACTGGAGAGAAGCCATATAAATGTAATGAATGTGGCAAGGTCTTCCATAAT ATGTCACACCTTGCACAGCATCGCAGGATTCATACTGGAGAGAAACCATATAAATGTAAT GAATGTGGCAAGGTCTTTAATCAAATTTCACACCTTGCACAACATCAAAGAATTCATACC GGAGAGAAACCTTATAAATGTAATGAATGTGGAAAGGTCTTCCATCAAATTTCACACCTT GCACAACATCGGACAATTCATACTGGAGAAAAACCTTACGAATGTAACAAATGTGGCAAG GTGTTCAGTCGCAATTCCTACCTTGTACAACATCTGATCATTCATACTGGAGAGAAACCT TACAGATGTAATGTATGTGGAAAGGTCTTCCATCATATTTCACACCTTGCACAACATCAG AGAATCCACACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCAGTCAC AAGTCATCCCTAGTAAATCACTGGAGAATTCATACTGGAGAGAAACCTTACAAATGTAAT GAGTGTGGCAAGGTCTTCAGTCACAAGTCATCCCTAGTAAATCACTGGAGAATCCACACT GGAGAGAAACCTTACAAATGTAATGAATGTGGCAAGGTCTTCAGTCGCAATTCATACCTT GCCCAACATCTGATAATTCATGCCGGTGAGAAACCTTATAAGTGTGATGAATGTGACAAA GCATTCAGTCAAAATTCACATCTTGTACAACATCACAGAATCCATACTGGAGAGAAACCT TACAAATGTGATGAATGTGGCAAAGTCTTCAGTCAAAATTCATACCTTGCATATCATTGG AGAATTCATACTGGAGAAAAAGCTTATAAATGTAATGAATGTGGGAAGGTCTTCGGTCTA AACTCATCCCTAGCACATCATCGGAAAATTCACACTGGAGAGAAACCTTTCAAATGTAAT GAATGTGGCAAAGCTTTTAGTATGCGTTCAAGCCTCACTAATCATCATGCGATCCACACT GGAGAGAAACATTTCAAATGTAATGAATGTGGCAAACTCTTCCGCGACAATTCATATCTT GTACGTCATCAGAGATTTCATGCCGGAAAGAAATCTAACACATGTAAT
Cloned ORF protein sequence for pF1KB9671 Download>KIBB9671 516 aa MHGRKDDAQKQPVKNQLGLNPQSHLPELQLFQAEGKIYKYDHMEKSVNSSSLVSPPQRIS STVKTHISHTYECNFVDSLFTQKEKANIGTEHYKCSERGKAFHQGLHFTIHQIIHTKETQ FKCDICGKIFNKKSNLASHQRIHTGEKPYKCNECGKVFHNMSHLAQHRRIHTGEKPYKCN ECGKVFNQISHLAQHQRIHTGEKPYKCNECGKVFHQISHLAQHRTIHTGEKPYECNKCGK VFSRNSYLVQHLIIHTGEKPYRCNVCGKVFHHISHLAQHQRIHTGEKPYKCNECGKVFSH KSSLVNHWRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSRNSYL AQHLIIHAGEKPYKCDECDKAFSQNSHLVQHHRIHTGEKPYKCDECGKVFSQNSYLAYHW RIHTGEKAYKCNECGKVFGLNSSLAHHRKIHTGEKPFKCNECGKAFSMRSSLTNHHAIHT GEKHFKCNECGKLFRDNSYLVRHQRFHAGKKSNTCN
Nucleotide Sequence (with vector) for pF1KB9671 Download>pF1KB9671 4661 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCATGGGAGA AAGGATGATGCACAAAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCCGCAGTCACAT CTACCAGAACTGCAGCTATTTCAAGCTGAAGGGAAAATATATAAATATGATCACATGGAA AAATCTGTCAACAGTAGTTCCTTAGTTTCCCCACCCCAACGTATTTCTTCTACTGTCAAA ACCCACATTTCTCATACATATGAATGTAATTTTGTGGATTCATTATTCACACAAAAAGAG AAAGCAAATATTGGGACAGAACACTACAAATGTAGTGAGCGTGGCAAGGCCTTTCATCAA GGCTTACATTTTACTATACATCAAATAATCCATACTAAAGAGACGCAATTTAAATGTGAT ATATGTGGCAAGATCTTCAATAAAAAATCAAACCTTGCAAGTCATCAAAGAATTCATACT GGAGAGAAGCCATATAAATGTAATGAATGTGGCAAGGTCTTCCATAATATGTCACACCTT GCACAGCATCGCAGGATTCATACTGGAGAGAAACCATATAAATGTAATGAATGTGGCAAG GTCTTTAATCAAATTTCACACCTTGCACAACATCAAAGAATTCATACCGGAGAGAAACCT TATAAATGTAATGAATGTGGAAAGGTCTTCCATCAAATTTCACACCTTGCACAACATCGG ACAATTCATACTGGAGAAAAACCTTACGAATGTAACAAATGTGGCAAGGTGTTCAGTCGC AATTCCTACCTTGTACAACATCTGATCATTCATACTGGAGAGAAACCTTACAGATGTAAT GTATGTGGAAAGGTCTTCCATCATATTTCACACCTTGCACAACATCAGAGAATCCACACT GGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCAGTCACAAGTCATCCCTA GTAAATCACTGGAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAG GTCTTCAGTCACAAGTCATCCCTAGTAAATCACTGGAGAATCCACACTGGAGAGAAACCT TACAAATGTAATGAATGTGGCAAGGTCTTCAGTCGCAATTCATACCTTGCCCAACATCTG ATAATTCATGCCGGTGAGAAACCTTATAAGTGTGATGAATGTGACAAAGCATTCAGTCAA AATTCACATCTTGTACAACATCACAGAATCCATACTGGAGAGAAACCTTACAAATGTGAT GAATGTGGCAAAGTCTTCAGTCAAAATTCATACCTTGCATATCATTGGAGAATTCATACT GGAGAAAAAGCTTATAAATGTAATGAATGTGGGAAGGTCTTCGGTCTAAACTCATCCCTA GCACATCATCGGAAAATTCACACTGGAGAGAAACCTTTCAAATGTAATGAATGTGGCAAA GCTTTTAGTATGCGTTCAAGCCTCACTAATCATCATGCGATCCACACTGGAGAGAAACAT TTCAAATGTAATGAATGTGGCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAG AGATTTCATGCCGGAAAGAAATCTAACACATGTAATGTTTAAACGAATTCGAGCTCGGTA CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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