PHF21B ORF clone pF1KB9546

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Flexi ORF Clone pF1KB9546

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Clone info.

Species

human

Clone Name

pF1KB9546 Sequence (with vector) Restriction Map

Product ID

FXC06344

HaloTag Clone PID

FHC06344

ORF Sequence

DNA sequence (1467 bp)
Protein sequence (489 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB489146]

Gene

KIBB9546

Symbol

PHF21B

Alias : BHC80L, PHF4

Description

PHD finger protein 21B, transcript variant 2

Original Clone ID

oc00024

Features of the cloned ORF sequence

Description

Length: 1467 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 489 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS46727.1 6.4e-107 100.0 PHF21B CCDS56234.1 3.1e-103 100.0 PHF21B CCDS63504.1 8.6e-71 100.0 PHF21B CCDS14061.1 2.6e-66 91.9 PHF21B CCDS31474.1 3.3e-29 38.9 PHF21A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019787 313 357 PF00628 Zinc finger HMMSmart IPR001965 312 355 SM00249 Zinc finger ProfileScan IPR019787 310 357 PS50016 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001129334 489 616727 100.0 100.0 XP_006724185 489 616727 100.0 100.0 NP_001229379 477 616727 100.0 96.5 NP_612424 531 616727 91.9 98.0 XP_016873392 633 608325 38.9 90.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9546 Download

>KIBB9546  1467 bp
ATGGAGCTGCAGAGCCGGCCCGAGGCGCTCGCCGTGGAACTCGCGCGCCACCAGAACGGC
GACCTCAAGAAGCAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAA
GCTTTGGGAACGATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGG
TTGGCCGGGCAAGGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGACTCTGATTCCAGAC
AGCCTCCCCGTTGCCCCGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCAGAAG
GCCACCGTGGTCAGCGTCAAGAACCCCAGCCCAGCCCTCCCCACCGCCAACAACACTGTC
AGCCATGTGCCAGCGCCCGGCAGCCAGCCCCAGGCCCTCGCCGAGCCCGCCGCCCTCGCC
TCTCCGCTGAGCAGTGCGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCAGCAATGCT
GCCGCCATGGCCCCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCC
CTCCTCATCAGTGCTGACAACAAGGTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCC
GAGAGCACGGCAGAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGAGCTCAGGCCACC
AAAAAGAAGAAGGAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAAAATCGCCTTCATG
GTAGCGCTAGGCCTGGTTACCACGGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGAG
CGGAAGAGAAGAAGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCGAGAGGAAA
CGGCTGGCCTCCAACTATCTCAACAACCCCCTGTTCCTCACAGCGAGAGCCAATGAGGAC
CCCTGCTGGAAGAACGAGATCACCCACGATGAGCACTGTGCCGCCTGCAAGCGAGGGGCC
AACCTGCAGCCCTGCGGCACCTGCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGCCC
CTCAAGACGGCGCCCAAGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAG
AAAGACGAGGGTGTGCCCTGGACTGGGATGCTGGCCATCGTGCACTCTTATGTCACCCAC
AAGACAGTCAAAGAAGAGGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAAC
GAGCACCAGCAGCTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGCCTG
GAGTTGAAGACAAGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTG
CGGGCCCTCCTGAGACTGATACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGACCACT
AGCCCTGCCCCACTGCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACACCCC
ACCGTCCAGCACCCCCAGGGCCACAAC

ORF Protein

Cloned ORF protein sequence for pF1KB9546 Download

>KIBB9546  489 aa
MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
LLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFM
VALGLVTTEHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANED
PCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK
KDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCL
ELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHP
TVQHPQGHN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9546 Download

>pF1KB9546  4580 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGCTGCAG
AGCCGGCCCGAGGCGCTCGCCGTGGAACTCGCGCGCCACCAGAACGGCGACCTCAAGAAG
CAGCTCCACGAAAGGCAGCCGCGGATCGCCGCGCTCAGCGACAAACAAGCTTTGGGAACG
ATCACTGCAGTGCCTGTCACGGGTCCTCAGGTCAGCTCCTTGCAGAGGTTGGCCGGGCAA
GGAGCGGCAGTGCTACCTCAGGTTAGGCCAAAGACTCTGATTCCAGACAGCCTCCCCGTT
GCCCCGGGCCGGGACCGGCCACCCAAGCAGCCCCCAACATTCCAGAAGGCCACCGTGGTC
AGCGTCAAGAACCCCAGCCCAGCCCTCCCCACCGCCAACAACACTGTCAGCCATGTGCCA
GCGCCCGGCAGCCAGCCCCAGGCCCTCGCCGAGCCCGCCGCCCTCGCCTCTCCGCTGAGC
AGTGCGGGGGTGGCCTACGCCATCATCTCCACCTCCCCCAGCAATGCTGCCGCCATGGCC
CCCAGCACCGCCGTGTCTGTGGTCAGTGACAGCATCAAAGTCCAGCCCCTCCTCATCAGT
GCTGACAACAAGGTCATCATCATTCAGCCTCAAGTGCAGACGCAGCCCGAGAGCACGGCA
GAGTCGCGGCCGCCCACAGAGGAGCCATCTCAGGGAGCTCAGGCCACCAAAAAGAAGAAG
GAAGACCGGCCCCCGACCCAGGAGAACCCCGAGAAAATCGCCTTCATGGTAGCGCTAGGC
CTGGTTACCACGGAACATTTGGAAGAAATCCAGAGCAAGCGACAGGAGCGGAAGAGAAGA
AGCACAGCCAACCCTGCCTACAGCGGCCTCCTGGAGACCGAGAGGAAACGGCTGGCCTCC
AACTATCTCAACAACCCCCTGTTCCTCACAGCGAGAGCCAATGAGGACCCCTGCTGGAAG
AACGAGATCACCCACGATGAGCACTGTGCCGCCTGCAAGCGAGGGGCCAACCTGCAGCCC
TGCGGCACCTGCCCGGGGGCCTACCACCTCAGCTGCCTGGAGCCGCCCCTCAAGACGGCG
CCCAAGGGCGTGTGGGTGTGCCCCAGGTGCCAGCAGAAGGCCTTAAAGAAAGACGAGGGT
GTGCCCTGGACTGGGATGCTGGCCATCGTGCACTCTTATGTCACCCACAAGACAGTCAAA
GAAGAGGAGAAGCAGAAGCTGCTGCAACGAGGCAGTGAGCTGCAGAACGAGCACCAGCAG
CTGGAGGAGCGGGACCGGCGGCTGGCGTCAGCAGTGCAGAAATGCCTGGAGTTGAAGACA
AGCCTGCTGGCCCGCCAGAGGGGCACCCAGTCATCCCTGGACCGCCTGCGGGCCCTCCTG
AGACTGATACAGGGCGAGCAGCTGCTCCAGGTCACCATGACGACCACTAGCCCTGCCCCA
CTGCTGGCCGGGCCCTGGACCAAGCCCTCAGTGGCAGCCACACACCCCACCGTCCAGCAC
CCCCAGGGCCACAACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT