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SpecieshumanProduct IDFXC03126Cloning SiteSgfI-PmeIGeneKIBB8979SymbolF2RL2
Alias : PAR-3, PAR3Descriptioncoagulation factor II (thrombin) receptor-like 2, transcript variant 1Original Clone IDcp01014
Length: 1122 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 374 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS4031.1 8.5e-114 100.0 F2RL2 CCDS58959.1 3.3e-107 100.0 F2RL2 CCDS4033.1 4.8e-30 38.4 F2RL1 CCDS12350.1 1.5e-27 36.9 F2RL3 CCDS4032.1 1.8e-26 32.1 F2R
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR003943 2 22 PR01429 Protease-activated receptor 3 IPR003943 31 52 PR01429 Protease-activated receptor 3 IPR003943 57 74 PR01429 Protease-activated receptor 3 IPR003943 78 94 PR01429 Protease-activated receptor 3 IPR003912 84 101 PR01428 Protease-activated receptor IPR000276 96 120 PR00237 GPCR IPR003943 119 133 PR01429 Protease-activated receptor 3 IPR000276 128 149 PR00237 GPCR IPR003912 151 165 PR01428 Protease-activated receptor IPR000276 173 195 PR00237 GPCR IPR003943 198 215 PR01429 Protease-activated receptor 3 IPR000276 209 230 PR00237 GPCR IPR003943 233 244 PR01429 Protease-activated receptor 3 IPR003943 252 263 PR01429 Protease-activated receptor 3 IPR000276 263 286 PR00237 GPCR IPR003912 263 274 PR01428 Protease-activated receptor IPR003943 293 305 PR01429 Protease-activated receptor 3 IPR000276 299 323 PR00237 GPCR IPR003912 301 314 PR01428 Protease-activated receptor IPR003943 323 338 PR01429 Protease-activated receptor 3 IPR003912 324 337 PR01428 Protease-activated receptor IPR000276 340 366 PR00237 GPCR HMMPfam IPR000276 112 358 PF00001 GPCR ProfileScan IPR017452 111 358 PS50262 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MKALIFAAAGLLLLLPTFCQSGM 23 PRIMARY 23 2 97 IPAIYLLVFVVGVPANAVTLWML 119 PRIMARY 23 3 130 VFYTNLAIADFLFCVTLPFKIAY 152 SECONDARY 23 4 163 EVLCRATTVIFYGNMYCSILLLA 185 PRIMARY 23 5 214 CGLVWATVFLYMLPFFILKQEYY 236 SECONDARY 23 6 263 FISLAFFGFLIPFVLIIYCYAAI 285 PRIMARY 23 7 302 ASLLILVIFTICFAPSNIILIIH 324 PRIMARY 23 8 338 FIYLIALCLGSLNSCLDPFLYFL 360 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004092 374 601919 100.0 100.0 NP_001243495 352 601919 100.0 94.1 NP_001983 425 187930 32.1 96.5 XP_006724506 548 300525 32.0 94.1 XP_006724927 548 300525 32.0 94.1 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB8979 Download>KIBB8979 1122 bp ATGAAAGCCCTCATCTTTGCAGCTGCTGGCCTCCTGCTTCTGTTGCCCACTTTTTGTCAG AGTGGCATGGAAAATGATACAAACAACTTGGCAAAGCCAACCTTACCCATTAAGACCTTT CGTGGAGCTCCCCCAAATTCTTTTGAAGAGTTCCCCTTTTCTGCCTTGGAAGGCTGGACA GGAGCCACGATTACTGTAAAAATTAAGTGCCCTGAAGAAAGTGCTTCACATCTCCATGTG AAAAATGCTACCATGGGGTACCTGACCAGCTCCTTAAGTACTAAACTGATACCTGCCATC TACCTCCTGGTGTTTGTAGTTGGTGTCCCGGCCAATGCTGTGACCCTGTGGATGCTTTTC TTCAGGACCAGATCCATCTGTACCACTGTATTCTACACCAACCTGGCCATTGCAGATTTT CTTTTTTGTGTTACATTGCCCTTTAAGATAGCTTATCATCTCAATGGGAACAACTGGGTA TTTGGAGAGGTCCTGTGCCGGGCCACCACAGTCATCTTCTATGGCAACATGTACTGCTCC ATTCTGCTCCTTGCCTGCATCAGCATCAACCGCTACCTGGCCATCGTCCATCCTTTCACC TACCGGGGCCTGCCCAAGCACACCTATGCCTTGGTAACATGTGGACTGGTGTGGGCAACA GTTTTCTTATATATGCTGCCATTTTTCATACTGAAGCAGGAATATTATCTTGTTCAGCCA GACATCACCACCTGCCATGATGTTCACAACACTTGCGAGTCCTCATCTCCCTTCCAACTC TATTACTTCATCTCCTTGGCATTCTTTGGATTCTTAATTCCATTTGTGCTTATCATCTAC TGCTATGCAGCCATCATCCGGACACTTAATGCATACGATCATAGATGGTTGTGGTATGTT AAGGCGAGTCTCCTCATCCTTGTGATTTTTACCATTTGCTTTGCTCCAAGCAATATTATT CTTATTATTCACCATGCTAACTACTACTACAACAACACTGATGGCTTATATTTTATATAT CTCATAGCTTTGTGCCTGGGTAGTCTTAATAGTTGCTTAGATCCATTCCTTTATTTTCTC ATGTCAAAAACCAGAAATCACTCCACTGCTTACCTTACAAAA
Cloned ORF protein sequence for pF1KB8979 Download>KIBB8979 374 aa MKALIFAAAGLLLLLPTFCQSGMENDTNNLAKPTLPIKTFRGAPPNSFEEFPFSALEGWT GATITVKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLF FRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCS ILLLACISINRYLAIVHPFTYRGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQP DITTCHDVHNTCESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAIIRTLNAYDHRWLWYV KASLLILVIFTICFAPSNIILIIHHANYYYNNTDGLYFIYLIALCLGSLNSCLDPFLYFL MSKTRNHSTAYLTK
Nucleotide Sequence (with vector) for pF1KB8979 Download>pF1KB8979 4235 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAAGCCCTC ATCTTTGCAGCTGCTGGCCTCCTGCTTCTGTTGCCCACTTTTTGTCAGAGTGGCATGGAA AATGATACAAACAACTTGGCAAAGCCAACCTTACCCATTAAGACCTTTCGTGGAGCTCCC CCAAATTCTTTTGAAGAGTTCCCCTTTTCTGCCTTGGAAGGCTGGACAGGAGCCACGATT ACTGTAAAAATTAAGTGCCCTGAAGAAAGTGCTTCACATCTCCATGTGAAAAATGCTACC ATGGGGTACCTGACCAGCTCCTTAAGTACTAAACTGATACCTGCCATCTACCTCCTGGTG TTTGTAGTTGGTGTCCCGGCCAATGCTGTGACCCTGTGGATGCTTTTCTTCAGGACCAGA TCCATCTGTACCACTGTATTCTACACCAACCTGGCCATTGCAGATTTTCTTTTTTGTGTT ACATTGCCCTTTAAGATAGCTTATCATCTCAATGGGAACAACTGGGTATTTGGAGAGGTC CTGTGCCGGGCCACCACAGTCATCTTCTATGGCAACATGTACTGCTCCATTCTGCTCCTT GCCTGCATCAGCATCAACCGCTACCTGGCCATCGTCCATCCTTTCACCTACCGGGGCCTG CCCAAGCACACCTATGCCTTGGTAACATGTGGACTGGTGTGGGCAACAGTTTTCTTATAT ATGCTGCCATTTTTCATACTGAAGCAGGAATATTATCTTGTTCAGCCAGACATCACCACC TGCCATGATGTTCACAACACTTGCGAGTCCTCATCTCCCTTCCAACTCTATTACTTCATC TCCTTGGCATTCTTTGGATTCTTAATTCCATTTGTGCTTATCATCTACTGCTATGCAGCC ATCATCCGGACACTTAATGCATACGATCATAGATGGTTGTGGTATGTTAAGGCGAGTCTC CTCATCCTTGTGATTTTTACCATTTGCTTTGCTCCAAGCAATATTATTCTTATTATTCAC CATGCTAACTACTACTACAACAACACTGATGGCTTATATTTTATATATCTCATAGCTTTG TGCCTGGGTAGTCTTAATAGTTGCTTAGATCCATTCCTTTATTTTCTCATGTCAAAAACC AGAAATCACTCCACTGCTTACCTTACAAAAGTTTAAACGAATTCGAGCTCGGTACCCGGG GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA TTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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