-
SpecieshumanProduct IDFXC03787Cloning SiteSgfI-PmeIGeneKIBB8554SymbolGRM8
Alias : GLUR8, GPRC1H, MGLUR8, mGlu8Descriptionglutamate receptor, metabotropic 8, transcript variant 2Original Clone IDcs01885
Length: 2724 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 908 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS47696.1 0 100.0 GRM8 CCDS5794.1 0 99.7 GRM8 CCDS4787.1 0 75.6 GRM4 CCDS43042.1 0 75.0 GRM7 CCDS59011.1 0 78.0 GRM4
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR000144 2 22 PR01058 GPCR IPR000144 24 39 PR01058 GPCR IPR000337 43 55 PR00248 GPCR IPR000337 72 87 PR00248 GPCR IPR000337 87 106 PR00248 GPCR IPR000337 150 176 PR00248 GPCR IPR000337 183 202 PR00248 GPCR IPR000337 202 218 PR00248 GPCR IPR000337 218 235 PR00248 GPCR IPR000162 245 256 PR00593 GPCR IPR000162 262 274 PR00593 GPCR IPR000162 327 342 PR00593 GPCR IPR000144 368 381 PR01058 GPCR IPR000162 397 408 PR00593 GPCR IPR000144 433 444 PR01058 GPCR IPR000144 501 513 PR01058 GPCR IPR000337 611 633 PR00248 GPCR IPR000162 652 666 PR00593 GPCR IPR000337 656 677 PR00248 GPCR IPR000337 695 718 PR00248 GPCR IPR000337 755 778 PR00248 GPCR IPR000337 778 799 PR00248 GPCR IPR000162 817 831 PR00593 GPCR IPR000144 888 901 PR01058 GPCR HMMPfam IPR001828 75 477 PF01094 Extracellular ligand-binding receptor IPR011500 512 562 PF07562 GPCR IPR017978 593 841 PF00003 GPCR ProfileScan IPR017978 583 857 PS50259 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 8 SASCPCFFLLTAKFYWILTMMQR 30 SECONDARY 23 2 576 KLEWHSPWAVVPVFVAILGIIAT 598 PRIMARY 23 3 617 SGRELSYVLLTGIFLCYSITFLM 639 PRIMARY 23 4 697 VITFSLISVQLLGVFVWFVVDPP 719 PRIMARY 23 5 744 ISDLSLICSLGYSILLMVTCTVY 766 SECONDARY 23 6 785 FTMYTTCIIWLAFIPIFFGTAQS 807 PRIMARY 23 7 817 TLTVSMSLSASVSLGMLYMPKVY 839 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514394 908 601116 100.0 100.0 NP_001120795 908 601116 100.0 100.0 XP_006716001 908 601116 99.7 98.7 NP_000836 908 601116 99.7 98.7 XP_011514393 908 601116 99.7 98.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB8554 Download>KIBB8554 2724 bp ATGGTATGCGAGGGAAAGCGATCAGCCTCTTGCCCTTGTTTCTTCCTCTTGACCGCCAAG TTCTACTGGATCCTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCCATTCCATA CGGGTGGATGGGGACATTATTTTGGGGGGTCTCTTCCCTGTCCACGCAAAGGGAGAGAGA GGGGTGCCTTGTGGGGAGCTGAAGAAGGAAAAGGGGATTCACAGACTGGAGGCCATGCTT TATGCAATTGACCAGATTAACAAGGACCCTGATCTCCTTTCCAACATCACTCTGGGTGTC CGCATCCTCGACACGTGCTCTAGGGACACCTATGCTTTGGAGCAGTCTCTAACATTCGTG CAGGCATTAATAGAGAAAGATGCTTCGGATGTGAAGTGTGCTAATGGAGATCCACCCATT TTCACCAAGCCCGACAAGATTTCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCCATC ATGGTTGCTAACATTTTAAGACTTTTTAAGATACCTCAAATCAGCTATGCATCCACAGCC CCAGAGCTAAGTGATAACACCAGGTATGACTTTTTCTCTCGAGTGGTTCCGCCTGACTCC TACCAAGCCCAAGCCATGGTGGACATCGTGACAGCACTGGGATGGAATTATGTTTCGACA CTGGCTTCTGAGGGGAACTATGGTGAGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGG GAGATTGGTGGTGTTTGCATTGCTCAGTCACAGAAAATCCCACGTGAACCAAGACCTGGA GAATTTGAAAAAATTATCAAACGCCTGCTAGAAACACCTAATGCTCGAGCAGTGATTATG TTTGCCAATGAGGATGACATCAGGAGGATATTGGAAGCAGCAAAAAAACTAAACCAAAGT GGGCATTTTCTCTGGATTGGCTCAGATAGTTGGGGATCCAAAATAGCACCTGTCTATCAG CAAGAGGAGATTGCAGAAGGGGCTGTGACAATTTTGCCCAAACGAGCATCAATTGATGGA TTTGATCGATACTTTAGAAGCCGAACTCTTGCCAATAATCGAAGAAATGTGTGGTTTGCA GAATTCTGGGAGGAGAATTTTGGCTGCAAGTTAGGATCACATGGGAAAAGGAACAGTCAT ATAAAGAAATGCACAGGGCTGGAGCGAATTGCTCGGGATTCATCTTATGAACAGGAAGGA AAGGTCCAATTTGTAATTGATGCTGTATATTCCATGGCTTACGCCCTGCACAATATGCAC AAAGATCTCTGCCCTGGATACATTGGCCTTTGTCCACGAATGAGTACCATTGATGGGAAA GAGCTACTTGGTTATATTCGGGCTGTAAATTTTAATGGCAGTGCTGGCACTCCTGTCACT TTTAATGAAAACGGAGATGCTCCTGGACGTTATGATATCTTCCAGTATCAAATAACCAAC AAAAGCACAGAGTACAAAGTCATCGGCCACTGGACCAATCAGCTTCATCTAAAAGTGGAA GACATGCAGTGGGCTCATAGAGAACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGT AAGCCAGGGGAGAGGAAGAAAACGGTGAAAGGGGTCCCTTGCTGCTGGCACTGTGAACGC TGTGAAGGTTACAACTACCAGGTGGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATCAG AGACCCAACATGAACCGCACAGGCTGCCAGCTTATCCCCATCATCAAATTGGAGTGGCAT TCTCCCTGGGCTGTGGTGCCTGTGTTTGTTGCAATATTGGGAATCATCGCCACCACCTTT GTGATCGTGACCTTTGTCCGCTATAATGACACACCTATCGTGAGGGCTTCAGGACGCGAA CTTAGTTACGTGCTCCTAACGGGGATTTTTCTCTGTTATTCAATCACGTTTTTAATGATT GCAGCACCAGATACAATCATATGCTCCTTCCGACGGGTCTTCCTAGGACTTGGCATGTGT TTCAGCTATGCAGCCCTTCTGACCAAAACAAACCGTATCCACCGAATATTTGAGCAGGGG AAGAAATCTGTCACAGCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTTC AGCCTCATCTCCGTCCAGCTCCTTGGAGTGTTTGTCTGGTTTGTTGTGGATCCCCCCCAC ATCATCATTGACTATGGAGAGCAGCGGACACTAGATCCAGAGAAGGCCAGGGGAGTGCTC AAGTGTGACATTTCTGATCTCTCACTCATTTGTTCACTTGGATACAGTATCCTCTTGATG GTCACTTGTACTGTTTATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCC AAACCTATTGGATTTACCATGTATACCACCTGCATCATTTGGTTAGCTTTCATCCCCATC TTTTTTGGTACAGCCCAGTCAGCAGAAAAGATGTACATCCAGACAACAACACTTACTGTC TCCATGAGTTTAAGTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCAAGGTTTATATT ATAATTTTTCATCCAGAACAGAATGTTCAAAAACGCAAGAGGAGCTTCAAGGCTGTGGTG ACAGCTGCCACCATGCAAAGCAAACTGATCCAAAAAGGAAATGACAGACCAAATGGCGAG GTGAAAAGTGAACTCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCG ATGGTCAAGAGCGGGAGCACTTCC
Cloned ORF protein sequence for pF1KB8554 Download>KIBB8554 908 aa MVCEGKRSASCPCFFLLTAKFYWILTMMQRTHSQEYAHSIRVDGDIILGGLFPVHAKGER GVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSNITLGVRILDTCSRDTYALEQSLTFV QALIEKDASDVKCANGDPPIFTKPDKISGVIGAAASSVSIMVANILRLFKIPQISYASTA PELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQISR EIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFANEDDIRRILEAAKKLNQS GHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLANNRRNVWFA EFWEENFGCKLGSHGKRNSHIKKCTGLERIARDSSYEQEGKVQFVIDAVYSMAYALHNMH KDLCPGYIGLCPRMSTIDGKELLGYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQYQITN KSTEYKVIGHWTNQLHLKVEDMQWAHREHTHPASVCSLPCKPGERKKTVKGVPCCWHCER CEGYNYQVDELSCELCPLDQRPNMNRTGCQLIPIIKLEWHSPWAVVPVFVAILGIIATTF VIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYSITFLMIAAPDTIICSFRRVFLGLGMC FSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLLGVFVWFVVDPPH IIIDYGEQRTLDPEKARGVLKCDISDLSLICSLGYSILLMVTCTVYAIKTRGVPETFNEA KPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLTVSMSLSASVSLGMLYMPKVYI IIFHPEQNVQKRKRSFKAVVTAATMQSKLIQKGNDRPNGEVKSELCESLETNSKSSVEFP MVKSGSTS
Nucleotide Sequence (with vector) for pF1KB8554 Download>pF1KB8554 5837 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTATGCGAG GGAAAGCGATCAGCCTCTTGCCCTTGTTTCTTCCTCTTGACCGCCAAGTTCTACTGGATC CTCACAATGATGCAAAGAACTCACAGCCAGGAGTATGCCCATTCCATACGGGTGGATGGG GACATTATTTTGGGGGGTCTCTTCCCTGTCCACGCAAAGGGAGAGAGAGGGGTGCCTTGT GGGGAGCTGAAGAAGGAAAAGGGGATTCACAGACTGGAGGCCATGCTTTATGCAATTGAC CAGATTAACAAGGACCCTGATCTCCTTTCCAACATCACTCTGGGTGTCCGCATCCTCGAC ACGTGCTCTAGGGACACCTATGCTTTGGAGCAGTCTCTAACATTCGTGCAGGCATTAATA GAGAAAGATGCTTCGGATGTGAAGTGTGCTAATGGAGATCCACCCATTTTCACCAAGCCC GACAAGATTTCTGGCGTCATAGGTGCTGCAGCAAGCTCCGTGTCCATCATGGTTGCTAAC ATTTTAAGACTTTTTAAGATACCTCAAATCAGCTATGCATCCACAGCCCCAGAGCTAAGT GATAACACCAGGTATGACTTTTTCTCTCGAGTGGTTCCGCCTGACTCCTACCAAGCCCAA GCCATGGTGGACATCGTGACAGCACTGGGATGGAATTATGTTTCGACACTGGCTTCTGAG GGGAACTATGGTGAGAGCGGTGTGGAGGCCTTCACCCAGATCTCGAGGGAGATTGGTGGT GTTTGCATTGCTCAGTCACAGAAAATCCCACGTGAACCAAGACCTGGAGAATTTGAAAAA ATTATCAAACGCCTGCTAGAAACACCTAATGCTCGAGCAGTGATTATGTTTGCCAATGAG GATGACATCAGGAGGATATTGGAAGCAGCAAAAAAACTAAACCAAAGTGGGCATTTTCTC TGGATTGGCTCAGATAGTTGGGGATCCAAAATAGCACCTGTCTATCAGCAAGAGGAGATT GCAGAAGGGGCTGTGACAATTTTGCCCAAACGAGCATCAATTGATGGATTTGATCGATAC TTTAGAAGCCGAACTCTTGCCAATAATCGAAGAAATGTGTGGTTTGCAGAATTCTGGGAG GAGAATTTTGGCTGCAAGTTAGGATCACATGGGAAAAGGAACAGTCATATAAAGAAATGC ACAGGGCTGGAGCGAATTGCTCGGGATTCATCTTATGAACAGGAAGGAAAGGTCCAATTT GTAATTGATGCTGTATATTCCATGGCTTACGCCCTGCACAATATGCACAAAGATCTCTGC CCTGGATACATTGGCCTTTGTCCACGAATGAGTACCATTGATGGGAAAGAGCTACTTGGT TATATTCGGGCTGTAAATTTTAATGGCAGTGCTGGCACTCCTGTCACTTTTAATGAAAAC GGAGATGCTCCTGGACGTTATGATATCTTCCAGTATCAAATAACCAACAAAAGCACAGAG TACAAAGTCATCGGCCACTGGACCAATCAGCTTCATCTAAAAGTGGAAGACATGCAGTGG GCTCATAGAGAACATACTCACCCGGCGTCTGTCTGCAGCCTGCCGTGTAAGCCAGGGGAG AGGAAGAAAACGGTGAAAGGGGTCCCTTGCTGCTGGCACTGTGAACGCTGTGAAGGTTAC AACTACCAGGTGGATGAGCTGTCCTGTGAACTTTGCCCTCTGGATCAGAGACCCAACATG AACCGCACAGGCTGCCAGCTTATCCCCATCATCAAATTGGAGTGGCATTCTCCCTGGGCT GTGGTGCCTGTGTTTGTTGCAATATTGGGAATCATCGCCACCACCTTTGTGATCGTGACC TTTGTCCGCTATAATGACACACCTATCGTGAGGGCTTCAGGACGCGAACTTAGTTACGTG CTCCTAACGGGGATTTTTCTCTGTTATTCAATCACGTTTTTAATGATTGCAGCACCAGAT ACAATCATATGCTCCTTCCGACGGGTCTTCCTAGGACTTGGCATGTGTTTCAGCTATGCA GCCCTTCTGACCAAAACAAACCGTATCCACCGAATATTTGAGCAGGGGAAGAAATCTGTC ACAGCGCCCAAGTTCATTAGTCCAGCATCTCAGCTGGTGATCACCTTCAGCCTCATCTCC GTCCAGCTCCTTGGAGTGTTTGTCTGGTTTGTTGTGGATCCCCCCCACATCATCATTGAC TATGGAGAGCAGCGGACACTAGATCCAGAGAAGGCCAGGGGAGTGCTCAAGTGTGACATT TCTGATCTCTCACTCATTTGTTCACTTGGATACAGTATCCTCTTGATGGTCACTTGTACT GTTTATGCCATTAAAACGAGAGGTGTCCCAGAGACTTTCAATGAAGCCAAACCTATTGGA TTTACCATGTATACCACCTGCATCATTTGGTTAGCTTTCATCCCCATCTTTTTTGGTACA GCCCAGTCAGCAGAAAAGATGTACATCCAGACAACAACACTTACTGTCTCCATGAGTTTA AGTGCTTCAGTATCTCTGGGCATGCTCTATATGCCCAAGGTTTATATTATAATTTTTCAT CCAGAACAGAATGTTCAAAAACGCAAGAGGAGCTTCAAGGCTGTGGTGACAGCTGCCACC ATGCAAAGCAAACTGATCCAAAAAGGAAATGACAGACCAAATGGCGAGGTGAAAAGTGAA CTCTGTGAGAGTCTTGAAACCAACAGTAAGTCATCTGTAGAGTTTCCGATGGTCAAGAGC GGGAGCACTTCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA AATATGTATCCGCTCAT
more Linker info
