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SpecieshumanProduct IDFXC02771Cloning SiteSgfI-PmeIGeneKIBB8345SymbolZNF555Descriptionzinc finger protein 555, transcript variant 1Original Clone IDoc00121
Length: 1884 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 628 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS12096.1 1.5e-136 100.0 ZNF555 CCDS59329.1 5e-136 99.8 ZNF555 CCDS12273.1 1.2e-60 53.3 ZNF791 CCDS42504.1 4.5e-60 54.2 ZNF709 CCDS42495.1 3.7e-59 52.6 ZNF699
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 4 44 PF01352 Krueppel-associated box IPR007087 200 222 PF00096 Zinc finger IPR007087 228 250 PF00096 Zinc finger IPR007087 256 278 PF00096 Zinc finger IPR007087 396 418 PF00096 Zinc finger IPR007087 424 446 PF00096 Zinc finger IPR007087 508 530 PF00096 Zinc finger HMMSmart IPR001909 4 66 SM00349 Krueppel-associated box IPR015880 172 194 SM00355 Zinc finger IPR015880 200 222 SM00355 Zinc finger IPR015880 228 250 SM00355 Zinc finger IPR015880 256 278 SM00355 Zinc finger IPR015880 284 306 SM00355 Zinc finger IPR015880 312 334 SM00355 Zinc finger IPR015880 340 362 SM00355 Zinc finger IPR015880 368 390 SM00355 Zinc finger IPR015880 396 418 SM00355 Zinc finger IPR015880 424 446 SM00355 Zinc finger IPR015880 452 474 SM00355 Zinc finger IPR015880 480 502 SM00355 Zinc finger IPR015880 508 530 SM00355 Zinc finger IPR015880 536 558 SM00355 Zinc finger IPR015880 564 586 SM00355 Zinc finger ProfileScan IPR001909 4 77 PS50805 Krueppel-associated box IPR007087 172 199 PS50157 Zinc finger IPR007087 200 227 PS50157 Zinc finger IPR007087 228 255 PS50157 Zinc finger IPR007087 256 283 PS50157 Zinc finger IPR007087 284 311 PS50157 Zinc finger IPR007087 312 339 PS50157 Zinc finger IPR007087 340 367 PS50157 Zinc finger IPR007087 368 395 PS50157 Zinc finger IPR007087 396 423 PS50157 Zinc finger IPR007087 424 451 PS50157 Zinc finger IPR007087 452 479 PS50157 Zinc finger IPR007087 480 507 PS50157 Zinc finger IPR007087 508 535 PS50157 Zinc finger IPR007087 536 563 PS50157 Zinc finger IPR007087 564 591 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_940937 642 609571 52.6 93.2 NP_066358 642 194556 49.6 94.7 NP_112495 620 603975 47.1 94.7 XP_016882730 628 604077 46.4 95.4 NP_003427 670 604077 45.1 95.9 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB8345 Download>KIBB8345 1884 bp ATGGACTCAGTGGTCTTTGAGGATGTGGCTGTGGACTTCACCCTGGAGGAGTGGGCTTTG CTGGATTCTGCTCAGAGGGACCTCTACAGAGATGTGATGCTGGAGACCTTTCAGAACCTG GCCTCAGTAGATGATGAAACTCAATTTAAGGCCAGTGGGTCAGTTTCTCAGCAGGATATT TATGGAGAGAAAATACCCAAGGAATCTAAAATAGCCACGTTCACCAGAAATGTTTCCTGG GCCTCTGTTTTAGGAAAAATTTGGGACAGTCTTAGCATCGAAGATCAAACCACAAACCAG GGGAGAAATCTCAGTAGAAATCATGGGTTGGAGAGACTCTGTGAAAGTAATGATCAATGT GGAGAAGCCCTCAGCCAGATTCCACATCTTAATCTGTACAAGAAAATTCCACCTGGAGTA AAACAGTATGAATACAACACGTACGGAAAAGTCTTCATGCATCGCCGCACATCCCTCAAG AGTCCCATCACAGTTCACACTGGACACAAACCATATCAGTGCCAGGAATGTGGGCAGGCC TACAGTTGTCGTTCACACCTAAGAATGCATGTGAGAACCCACAATGGAGAGAGACCCTAT GTGTGTAAATTATGTGGGAAAACCTTTCCTCGTACTTCCTCCCTCAATCGGCATGTAAGG ATTCACACTGCTGAGAAAACTTACGAATGTAAGCAATGTGGGAAAGCCTTTATTGACTTC TCAAGTCTTACTAGTCATCTCAGAAGTCACACCGGAGAGAAGCCATATAAGTGTAAGGAA TGTGGGAAAGCTTTCAGTTATTCCTCAACGTTTCGAAGACACACAATAACACACACTGGC GAGAAGCCATATAAATGTAAGGAATGTGCGGAAGCCTTTAGTTATTCCTCAACTTTTCGA AGACATATGATTTCACACACTGGAGAGAAGCCACATAAATGTAAAGAATGTGGGGAGGCC TTCAGTTATTCTTCGGCTTTTCGAAGACACATGATAACACACACTGGAGAGAAACCCTAC GAATGCAAACAATGTGGGAAAACCTTCATTTATCTCCAGTCCTTTCGAAGACATGAAAGG ATTCACACTGGAGAGAAACCCTACGAATGCAAACAGTGTGGGAAGACCTTCATTTATCCC CAGTCCTTTCGAAGACATGAAAGGACTCATGGTGGAGAGAAACCCTATGAATGCAACCAG TGCGGGAAAGCATTCAGTCACCCCTCCTCCTTTCGAGGACACATGAGGGTGCACACTGGA GAGAAACCCTATGAGTGCAAGCAATGTGGGAAAACTTTCAATTGGCCCATATCTTTACGA AAACATATGAGAACACATACTAGAGAGAAACCCTATGAATGTAAGCAGTGTGGGAAAGCC TTCAGCTTGTCTGCTTGCTTTCGAGAACATGTGAGAATGCACCCTGAAGACAAATCCTAT GAATGCAAGCTATGTGGGAAAGCTTTCTATTGCCACATATCCTTACAAAAACATATGAGA AGGCATACCGCAGAGAAACTCTATAAATGCAAGCAGTGTGGGAAAGCTTTCAGTTGGCCT GAACTTTTGCAACAACATGTGAGAACGCACACTGTAGAGAAGCCCTATGAATGTAAGGAA TGTGGGAAGGTCTTCAAATGGCCATCATCTTTACCAATACATATGAGACTGCACACTGGA GAGAAACCTTATCAATGTAAGCATTGTGGGAAAGCATTCAATTGTTCCTCATCCTTAAGG CGACATGTGAGAATACACACTACAGAAAAACAGTATAAGTGTAATGTAGGACATCCTCCT GCAAATGAATTCATGTGCAGTGCTTCAGAAAAGTCACACCAGGAGAGAGATCTGATCAAA GTTGTAAATATGGTGTTGCCTTTA
Cloned ORF protein sequence for pF1KB8345 Download>KIBB8345 628 aa MDSVVFEDVAVDFTLEEWALLDSAQRDLYRDVMLETFQNLASVDDETQFKASGSVSQQDI YGEKIPKESKIATFTRNVSWASVLGKIWDSLSIEDQTTNQGRNLSRNHGLERLCESNDQC GEALSQIPHLNLYKKIPPGVKQYEYNTYGKVFMHRRTSLKSPITVHTGHKPYQCQECGQA YSCRSHLRMHVRTHNGERPYVCKLCGKTFPRTSSLNRHVRIHTAEKTYECKQCGKAFIDF SSLTSHLRSHTGEKPYKCKECGKAFSYSSTFRRHTITHTGEKPYKCKECAEAFSYSSTFR RHMISHTGEKPHKCKECGEAFSYSSAFRRHMITHTGEKPYECKQCGKTFIYLQSFRRHER IHTGEKPYECKQCGKTFIYPQSFRRHERTHGGEKPYECNQCGKAFSHPSSFRGHMRVHTG EKPYECKQCGKTFNWPISLRKHMRTHTREKPYECKQCGKAFSLSACFREHVRMHPEDKSY ECKLCGKAFYCHISLQKHMRRHTAEKLYKCKQCGKAFSWPELLQQHVRTHTVEKPYECKE CGKVFKWPSSLPIHMRLHTGEKPYQCKHCGKAFNCSSSLRRHVRIHTTEKQYKCNVGHPP ANEFMCSASEKSHQERDLIKVVNMVLPL
Nucleotide Sequence (with vector) for pF1KB8345 Download>pF1KB8345 4997 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACTCAGTG GTCTTTGAGGATGTGGCTGTGGACTTCACCCTGGAGGAGTGGGCTTTGCTGGATTCTGCT CAGAGGGACCTCTACAGAGATGTGATGCTGGAGACCTTTCAGAACCTGGCCTCAGTAGAT GATGAAACTCAATTTAAGGCCAGTGGGTCAGTTTCTCAGCAGGATATTTATGGAGAGAAA ATACCCAAGGAATCTAAAATAGCCACGTTCACCAGAAATGTTTCCTGGGCCTCTGTTTTA GGAAAAATTTGGGACAGTCTTAGCATCGAAGATCAAACCACAAACCAGGGGAGAAATCTC AGTAGAAATCATGGGTTGGAGAGACTCTGTGAAAGTAATGATCAATGTGGAGAAGCCCTC AGCCAGATTCCACATCTTAATCTGTACAAGAAAATTCCACCTGGAGTAAAACAGTATGAA TACAACACGTACGGAAAAGTCTTCATGCATCGCCGCACATCCCTCAAGAGTCCCATCACA GTTCACACTGGACACAAACCATATCAGTGCCAGGAATGTGGGCAGGCCTACAGTTGTCGT TCACACCTAAGAATGCATGTGAGAACCCACAATGGAGAGAGACCCTATGTGTGTAAATTA TGTGGGAAAACCTTTCCTCGTACTTCCTCCCTCAATCGGCATGTAAGGATTCACACTGCT GAGAAAACTTACGAATGTAAGCAATGTGGGAAAGCCTTTATTGACTTCTCAAGTCTTACT AGTCATCTCAGAAGTCACACCGGAGAGAAGCCATATAAGTGTAAGGAATGTGGGAAAGCT TTCAGTTATTCCTCAACGTTTCGAAGACACACAATAACACACACTGGCGAGAAGCCATAT AAATGTAAGGAATGTGCGGAAGCCTTTAGTTATTCCTCAACTTTTCGAAGACATATGATT TCACACACTGGAGAGAAGCCACATAAATGTAAAGAATGTGGGGAGGCCTTCAGTTATTCT TCGGCTTTTCGAAGACACATGATAACACACACTGGAGAGAAACCCTACGAATGCAAACAA TGTGGGAAAACCTTCATTTATCTCCAGTCCTTTCGAAGACATGAAAGGATTCACACTGGA GAGAAACCCTACGAATGCAAACAGTGTGGGAAGACCTTCATTTATCCCCAGTCCTTTCGA AGACATGAAAGGACTCATGGTGGAGAGAAACCCTATGAATGCAACCAGTGCGGGAAAGCA TTCAGTCACCCCTCCTCCTTTCGAGGACACATGAGGGTGCACACTGGAGAGAAACCCTAT GAGTGCAAGCAATGTGGGAAAACTTTCAATTGGCCCATATCTTTACGAAAACATATGAGA ACACATACTAGAGAGAAACCCTATGAATGTAAGCAGTGTGGGAAAGCCTTCAGCTTGTCT GCTTGCTTTCGAGAACATGTGAGAATGCACCCTGAAGACAAATCCTATGAATGCAAGCTA TGTGGGAAAGCTTTCTATTGCCACATATCCTTACAAAAACATATGAGAAGGCATACCGCA GAGAAACTCTATAAATGCAAGCAGTGTGGGAAAGCTTTCAGTTGGCCTGAACTTTTGCAA CAACATGTGAGAACGCACACTGTAGAGAAGCCCTATGAATGTAAGGAATGTGGGAAGGTC TTCAAATGGCCATCATCTTTACCAATACATATGAGACTGCACACTGGAGAGAAACCTTAT CAATGTAAGCATTGTGGGAAAGCATTCAATTGTTCCTCATCCTTAAGGCGACATGTGAGA ATACACACTACAGAAAAACAGTATAAGTGTAATGTAGGACATCCTCCTGCAAATGAATTC ATGTGCAGTGCTTCAGAAAAGTCACACCAGGAGAGAGATCTGATCAAAGTTGTAAATATG GTGTTGCCTTTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA AATATGTATCCGCTCAT
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