-
SpecieshumanProduct IDFXC01695Cloning SiteSgfI-PmeIGeneKIBB7824SymbolZNF169Descriptionzinc finger protein 169, transcript variant 1Original Clone IDcs00324
Length: 1812 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 604 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS6709.2 7.3e-137 99.8 ZNF169 CCDS82337.1 1.7e-58 50.9 HKR1 CCDS43307.1 2.3e-56 51.9 PRDM9 CCDS13174.1 2.7e-56 46.4 ZNF337 CCDS31940.1 6.2e-55 45.8 ZNF84
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 15 54 PF01352 Krueppel-associated box IPR007087 235 257 PF00096 Zinc finger IPR007087 263 285 PF00096 Zinc finger IPR007087 347 369 PF00096 Zinc finger IPR007087 403 425 PF00096 Zinc finger IPR007087 487 509 PF00096 Zinc finger IPR007087 571 592 PF00096 Zinc finger HMMSmart IPR001909 14 74 SM00349 Krueppel-associated box IPR015880 235 257 SM00355 Zinc finger IPR015880 263 285 SM00355 Zinc finger IPR015880 291 313 SM00355 Zinc finger IPR015880 319 341 SM00355 Zinc finger IPR015880 347 369 SM00355 Zinc finger IPR015880 375 397 SM00355 Zinc finger IPR015880 403 425 SM00355 Zinc finger IPR015880 431 453 SM00355 Zinc finger IPR015880 459 481 SM00355 Zinc finger IPR015880 487 509 SM00355 Zinc finger IPR015880 543 565 SM00355 Zinc finger IPR015880 571 596 SM00355 Zinc finger ProfileScan IPR001909 14 85 PS50805 Krueppel-associated box IPR007087 235 262 PS50157 Zinc finger IPR007087 263 290 PS50157 Zinc finger IPR007087 291 318 PS50157 Zinc finger IPR007087 319 346 PS50157 Zinc finger IPR007087 347 374 PS50157 Zinc finger IPR007087 375 402 PS50157 Zinc finger IPR007087 403 430 PS50157 Zinc finger IPR007087 431 458 PS50157 Zinc finger IPR007087 459 486 PS50157 Zinc finger IPR007087 487 514 PS50157 Zinc finger IPR007087 515 542 PS50157 Zinc finger IPR007087 543 570 PS50157 Zinc finger IPR007087 571 598 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003439 604 603404 100.0 100.0 XP_016869851 604 603404 100.0 100.0 NP_919301 603 603404 99.8 100.0 XP_016869852 591 603404 100.0 97.8 XP_016869853 590 603404 99.8 97.8 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB7824 Download>KIBB7824 1812 bp ATGTCACCAGGACTCCTGACAACCAGGAAGGAGGCATTGATGGCCTTCCGGGATGTGGCT GTGGCCTTCACCCAGAAGGAGTGGAAGCTATTGAGTTCTGCTCAGAGGACCCTGTACAGG GAGGTGATGCTGGAGAACTACAGCCATCTGGTCTCCCTGGGAATTGCATTTTCCAAACCA AAACTCATCGAACAGCTGGAGCAAGGCGACGAACCTTGGAGAGAGGAGAACGAACATCTT CTGGACCTTTGTCCAGCAGAGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTG GCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGGCCATCCCACACAGATC TTCCCAAGCTCATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAGATGCTCTAGTGAA AAAGGAGAAAGTGGAGAGACAGAAGGCCCCGACAGCTCATTAAGAAAGAGGCCAAGCAGA ATTTCTAGGACATTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAAGGGAAC AGAGAAGGAGGAACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGGGGGGTCAGACACA ATGTTGAAGGGAGCAGACACTTCAGAATCTGGAGCAGTCATACGTGGAAACTATAGACTG GGACTTAGCAAAAAGTCAAGCCTGTTCAGCCACCAGAAGCATCATGTGTGCCCTGAATGC GGGAGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCACCAGAGGACACACACCGGGGAG AAGCCATACCTGTGTCCTGAGTGTGGGCGTCGGTTTAGCCAGAAGGCCTCCCTCTCCATA CACCAGAGGAAGCACTCGGGGGAGAAGCCGTATGTGTGCAGGGAATGTGGGCGACACTTC AGGTATACATCCTCTCTCACTAATCACAAGAGGATTCACTCCGGGGAGAGGCCCTTTGTA TGTCAGGAGTGTGGGCGAGGCTTTCGCCAGAAGATAGCCCTCCTTCTACACCAGAGGACG CACTTGGAGGAGAAGCCCTTCGTGTGTCCTGAGTGTGGGAGAGGCTTTTGCCAGAAGGCA TCACTCCTCCAGCACCAGAGCTCACACACAGGGGAGAGGCCCTTCCTGTGCCTTGAGTGT GGGCGTAGCTTCAGGCAGCAGTCACTCCTCCTTAGTCACCAGGTCACACACTCAGGAGAG AAGCCTTATGTCTGTGCTGAGTGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCATCAGG CACCAGAGGACACACACAGGGGAGAAGCCTTACCTGTGCCCCCAGTGTGGGCGGGGTTTT AGCCAGAAGGTCACCCTCATTGGACACCAGAGGACACACACAGGGGAGAAGCCCTACCTG TGCCCTGATTGTGGGCGTGGCTTTGGTCAGAAGGTCACCCTCATCAGACACCAGAGGACA CACACAGGGGAGAAGCCTTATCTGTGCCCCAAGTGTGGGCGTGCATTTGGCTTTAAGTCG CTCCTCACCCGACACCAGAGGACACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGT GGACAAGGACTTGGCCAGAAGTCACACCTTATCTCTGACCAAAGGACACACTCAGGAGAG AAGCCCTGCATTTGCGATGAATGTGGGCGCGGCTTTGGCTTTAAGTCTGCCCTCATCCGA CATCAGCGGACCCATTCTGGGGAGAAGCCGTATGTCTGCAGGGAGTGTGGGCGTGGCTTT AGCCAGAAGTCTCACTTGCATAGACACAGGAGGACCAAGTCTGGTCATCAGCTCCTACCC CAAGAGGTCTTC
Cloned ORF protein sequence for pF1KB7824 Download>KIBB7824 604 aa MSPGLLTTRKEALMAFRDVAVAFTQKEWKLLSSAQRTLYREVMLENYSHLVSLGIAFSKP KLIEQLEQGDEPWREENEHLLDLCPAEPRTEFQPSFPHLVAFSSSQLLRQYALSGHPTQI FPSSSAGGDFQLEAPRCSSEKGESGETEGPDSSLRKRPSRISRTFFSPHQGDPVEWVEGN REGGTDLRLAQRMSLGGSDTMLKGADTSESGAVIRGNYRLGLSKKSSLFSHQKHHVCPEC GRGFCQRSDLIKHQRTHTGEKPYLCPECGRRFSQKASLSIHQRKHSGEKPYVCRECGRHF RYTSSLTNHKRIHSGERPFVCQECGRGFRQKIALLLHQRTHLEEKPFVCPECGRGFCQKA SLLQHQSSHTGERPFLCLECGRSFRQQSLLLSHQVTHSGEKPYVCAECGHSFRQKVTLIR HQRTHTGEKPYLCPQCGRGFSQKVTLIGHQRTHTGEKPYLCPDCGRGFGQKVTLIRHQRT HTGEKPYLCPKCGRAFGFKSLLTRHQRTHSEEELYVDRVCGQGLGQKSHLISDQRTHSGE KPCICDECGRGFGFKSALIRHQRTHSGEKPYVCRECGRGFSQKSHLHRHRRTKSGHQLLP QEVF
Nucleotide Sequence (with vector) for pF1KB7824 Download>pF1KB7824 4925 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCACCAGGA CTCCTGACAACCAGGAAGGAGGCATTGATGGCCTTCCGGGATGTGGCTGTGGCCTTCACC CAGAAGGAGTGGAAGCTATTGAGTTCTGCTCAGAGGACCCTGTACAGGGAGGTGATGCTG GAGAACTACAGCCATCTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAACTCATCGAA CAGCTGGAGCAAGGCGACGAACCTTGGAGAGAGGAGAACGAACATCTTCTGGACCTTTGT CCAGCAGAGCCTAGAACAGAATTCCAGCCAAGTTTTCCCCACCTGGTGGCCTTTTCTAGC TCGCAGCTCCTCAGACAATATGCGCTAAGTGGCCATCCCACACAGATCTTCCCAAGCTCA TCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAGATGCTCTAGTGAAAAAGGAGAAAGT GGAGAGACAGAAGGCCCCGACAGCTCATTAAGAAAGAGGCCAAGCAGAATTTCTAGGACA TTCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAAGGGAACAGAGAAGGAGGA ACAGACCTTCGCCTGGCCCAAAGGATGAGTCTTGGGGGGTCAGACACAATGTTGAAGGGA GCAGACACTTCAGAATCTGGAGCAGTCATACGTGGAAACTATAGACTGGGACTTAGCAAA AAGTCAAGCCTGTTCAGCCACCAGAAGCATCATGTGTGCCCTGAATGCGGGAGAGGCTTT TGCCAGAGATCAGACCTTATCAAGCACCAGAGGACACACACCGGGGAGAAGCCATACCTG TGTCCTGAGTGTGGGCGTCGGTTTAGCCAGAAGGCCTCCCTCTCCATACACCAGAGGAAG CACTCGGGGGAGAAGCCGTATGTGTGCAGGGAATGTGGGCGACACTTCAGGTATACATCC TCTCTCACTAATCACAAGAGGATTCACTCCGGGGAGAGGCCCTTTGTATGTCAGGAGTGT GGGCGAGGCTTTCGCCAGAAGATAGCCCTCCTTCTACACCAGAGGACGCACTTGGAGGAG AAGCCCTTCGTGTGTCCTGAGTGTGGGAGAGGCTTTTGCCAGAAGGCATCACTCCTCCAG CACCAGAGCTCACACACAGGGGAGAGGCCCTTCCTGTGCCTTGAGTGTGGGCGTAGCTTC AGGCAGCAGTCACTCCTCCTTAGTCACCAGGTCACACACTCAGGAGAGAAGCCTTATGTC TGTGCTGAGTGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCATCAGGCACCAGAGGACA CACACAGGGGAGAAGCCTTACCTGTGCCCCCAGTGTGGGCGGGGTTTTAGCCAGAAGGTC ACCCTCATTGGACACCAGAGGACACACACAGGGGAGAAGCCCTACCTGTGCCCTGATTGT GGGCGTGGCTTTGGTCAGAAGGTCACCCTCATCAGACACCAGAGGACACACACAGGGGAG AAGCCTTATCTGTGCCCCAAGTGTGGGCGTGCATTTGGCTTTAAGTCGCTCCTCACCCGA CACCAGAGGACACACTCAGAGGAGGAGCTTTACGTAGACAGGGTGTGTGGACAAGGACTT GGCCAGAAGTCACACCTTATCTCTGACCAAAGGACACACTCAGGAGAGAAGCCCTGCATT TGCGATGAATGTGGGCGCGGCTTTGGCTTTAAGTCTGCCCTCATCCGACATCAGCGGACC CATTCTGGGGAGAAGCCGTATGTCTGCAGGGAGTGTGGGCGTGGCTTTAGCCAGAAGTCT CACTTGCATAGACACAGGAGGACCAAGTCTGGTCATCAGCTCCTACCCCAAGAGGTCTTC GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG CTCAT
more Linker info
