-
SpecieshumanProduct IDFXC02236Cloning SiteSgfI-PmeIGeneKIBB7065SymbolZNF107
Alias : Y8, ZFD25, ZNF588, smap-7Descriptionzinc finger protein 107, transcript variant 1Original Clone IDcp01070
Length: 2349 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 783 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS5527.1 8.8e-177 100.0 ZNF107 CCDS75605.1 9.3e-177 100.0 ZNF107 CCDS75606.1 2.4e-175 100.0 ZNF107 CCDS42541.1 7.5e-113 66.2 ZNF91 CCDS74322.1 2e-112 66.7 ZNF91
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ]
Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR007087 132 154 PF00096 Zinc finger IPR007087 160 182 PF00096 Zinc finger IPR007087 244 266 PF00096 Zinc finger IPR007087 328 350 PF00096 Zinc finger IPR007087 356 378 PF00096 Zinc finger IPR007087 384 404 PF00096 Zinc finger IPR007087 412 434 PF00096 Zinc finger IPR007087 440 462 PF00096 Zinc finger IPR007087 468 490 PF00096 Zinc finger IPR007087 496 518 PF00096 Zinc finger IPR007087 692 714 PF00096 Zinc finger HMMSmart IPR015880 104 126 SM00355 Zinc finger IPR015880 132 154 SM00355 Zinc finger IPR015880 160 182 SM00355 Zinc finger IPR015880 188 210 SM00355 Zinc finger IPR015880 216 238 SM00355 Zinc finger IPR015880 244 266 SM00355 Zinc finger IPR015880 272 294 SM00355 Zinc finger IPR015880 300 320 SM00355 Zinc finger IPR015880 328 350 SM00355 Zinc finger IPR015880 356 378 SM00355 Zinc finger IPR015880 384 404 SM00355 Zinc finger IPR015880 412 434 SM00355 Zinc finger IPR015880 440 462 SM00355 Zinc finger IPR015880 468 490 SM00355 Zinc finger IPR015880 496 518 SM00355 Zinc finger IPR015880 524 546 SM00355 Zinc finger IPR015880 608 630 SM00355 Zinc finger IPR015880 636 658 SM00355 Zinc finger IPR015880 664 686 SM00355 Zinc finger IPR015880 692 714 SM00355 Zinc finger IPR015880 720 742 SM00355 Zinc finger IPR015880 748 770 SM00355 Zinc finger ProfileScan IPR007087 104 131 PS50157 Zinc finger IPR007087 132 159 PS50157 Zinc finger IPR007087 160 187 PS50157 Zinc finger IPR007087 188 215 PS50157 Zinc finger IPR007087 216 243 PS50157 Zinc finger IPR007087 244 271 PS50157 Zinc finger IPR007087 272 299 PS50157 Zinc finger IPR007087 300 327 PS50157 Zinc finger IPR007087 328 355 PS50157 Zinc finger IPR007087 356 383 PS50157 Zinc finger IPR007087 384 411 PS50157 Zinc finger IPR007087 412 439 PS50157 Zinc finger IPR007087 440 467 PS50157 Zinc finger IPR007087 468 495 PS50157 Zinc finger IPR007087 496 523 PS50157 Zinc finger IPR007087 524 551 PS50157 Zinc finger IPR007087 552 579 PS50157 Zinc finger IPR007087 580 607 PS50157 Zinc finger IPR007087 608 635 PS50157 Zinc finger IPR007087 636 663 PS50157 Zinc finger IPR007087 664 691 PS50157 Zinc finger IPR007087 692 719 PS50157 Zinc finger IPR007087 720 747 PS50157 Zinc finger IPR007087 748 775 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016867774 783 603989 100.0 100.0 NP_001013768 783 603989 100.0 100.0 XP_016867775 783 603989 100.0 100.0 NP_057304 783 603989 100.0 100.0 XP_016867773 783 603989 100.0 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB7065 Download>KIBB7065 2349 bp ATGGTAGCCAAACCCCCAGTAATGTCTTTTCATTTTGCCCAAGACCTTTGGCCAGAGCAG AACATAAAAGATTCTTTCCAGAAAGTGACACTGAGAAGATACGGAAAATGTGAATATGAG AATTTACAGTTAAGAAAAGGCTGTAAACATGTGGATGAGTGTACGGGGCACAAAGGAGGT CATAATACAGTTAACCAATGTTTGACAGCTACCCCAAGCAAAATATTCCAGTGTAATAAA TATGTGAAAGTCTTTGATAAATTTTCAAATTCAAATAGATATAAGAGAAGACATACAGGA AACAAACACTTCAAATGTAAAGAATGTAGCAAATCATTTTGCGTGCTTTCACAACTAACT CAGCATAGAAGAATTCATACTAGAGTGAATTCCTACAAATGTGAAGAATGTGGAAAAGCC TTTAACTGGTTCTCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAAAAGCCCTAC AAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCACAACTTACTAGGCATAAGATA ATTCATACTGAAGAGAAACCCAACAAATGTGAAGAATGTGGCAAGGCCTTTAAACAGGCC TCACACCTTACTATACATAAAATAATTCATACTGGAGAAAAACCTTACAAATATGAAGAA TGTGGCAAAGTCTTTAGCCAGTCCTCACACCTTACTACACAAAAGATACTTCACACTGGA GAGAACCTCTACAAGTGTAAAGAATGTGGAAAAGCTTTTAACCTATTCTCAAATCTTACT AACCATAAGAGAATTCATGCTGGGGAGAAACCCTACAAATGTAAAGAATGTGGCAGAGCT TTTAACATATCCTCAAACCTTAATAAACAGGAGAAAATTCATACTGGAGGGAAACTCAAC AAATGTGAAGAATGTGACAAAGCTTTTAACCGATCCTTAAAACTTACTGCACATAAGAAA ATTCTAATGGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGTCTTTAACCAGTTC TCAACTCTTACTAGACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAA TGTGGCAAAGCTTTTAACCAATCTTCAAACCTTACTGAACATAAGAAAATTCATACTGCA GAGAAATCCTATAAATGTGAAGAATGTGGCAAAGCTTTTAACCAACACTCAAACCTAATT AACCATAGGAAAATTTATTCTGGAGAGAAACCATACAAATGTGAAGAATGTGGAAAAGCT TTTAATCGATCCTCAACCCTTACTAGACATAAGAAAATTCATACTGGAGAGAAACCCTAC AAATGTGAAGAATGTGACAGAGCTTTTAGCCAGTCTTCAAACCTTACTGAACATAAGAAA ATTCATACTGGAGAGAAACCCTATAAATGTGAGGAATGTGGCAAAGCTTTTAACCGATTC TCAACCCTTACTAAACATAAGAGAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAA TGTGGAAAAGCCTTTAATCAATCCTATCAACTTACTAGACATAAGATAGTTCATACTAAA GAGAAACTCAACAAATGTGAAGAATTTGGCAAGGCCTTTAAACAGTCCTCACACCGTACT ATACATAAAATTATTCATACTGGAGAGAAACCCTACAAATGTGAAGAACATGGCAAAGTT TTTAACCAGTCCTCAAACCTTACTACACAAAAGATAATTCATACTGGAGAGAACCTCTAC AAATTTGAAGAACATGGAAAAGCTTTTAACCTATTCTCAAACATTACTAACCATAAGATA ATTTATACTGGAGAGAAACCCCACAAATGTGAAGAATGTGGAAAAGCTTATAACCGATTC TCAAACCTAACTATACATAAGAGAATTCATACGGGAGAGAAACCTTACCAATGTGCAGAA TGTGGCAAAGCCTTTAACTGCTCCTCAACCCTTAATAGACATAAGATAATTCATACTGGA GAGAAACCTTACAAATGTAAAGAATGTGGCAAAGCTTTTAACCTATCCTCAACCCTTACT GCACATAAGAAAATTCATACTGGAGAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCT TTTAACCAATCCTCAAACCTTACTACACATAAGAAAATTCATACTTCAGAGAAACCCTAC AAATGTGAAGAATGTGGCAAATCCTTTAACCAGTTCTCATCTCTTAATATACATAAGATA ATTCATACTGGAGAGAAACCCTACAAATGTGGAGATTATGGCAGAGCTTTCAACCTATCC TCAAATCTTACTACACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAGTAT GGCAAAACT
Cloned ORF protein sequence for pF1KB7065 Download>KIBB7065 783 aa MVAKPPVMSFHFAQDLWPEQNIKDSFQKVTLRRYGKCEYENLQLRKGCKHVDECTGHKGG HNTVNQCLTATPSKIFQCNKYVKVFDKFSNSNRYKRRHTGNKHFKCKECSKSFCVLSQLT QHRRIHTRVNSYKCEECGKAFNWFSTLTKHKRIHTGEKPYKCEECGKAFNQSSQLTRHKI IHTEEKPNKCEECGKAFKQASHLTIHKIIHTGEKPYKYEECGKVFSQSSHLTTQKILHTG ENLYKCKECGKAFNLFSNLTNHKRIHAGEKPYKCKECGRAFNISSNLNKQEKIHTGGKLN KCEECDKAFNRSLKLTAHKKILMEEKPYKCEECGKVFNQFSTLTRHKIIHTGEKPYKCKE CGKAFNQSSNLTEHKKIHTAEKSYKCEECGKAFNQHSNLINHRKIYSGEKPYKCEECGKA FNRSSTLTRHKKIHTGEKPYKCEECDRAFSQSSNLTEHKKIHTGEKPYKCEECGKAFNRF STLTKHKRIHTGEKPYKCEECGKAFNQSYQLTRHKIVHTKEKLNKCEEFGKAFKQSSHRT IHKIIHTGEKPYKCEEHGKVFNQSSNLTTQKIIHTGENLYKFEEHGKAFNLFSNITNHKI IYTGEKPHKCEECGKAYNRFSNLTIHKRIHTGEKPYQCAECGKAFNCSSTLNRHKIIHTG EKPYKCKECGKAFNLSSTLTAHKKIHTGEKPYKCEECGKAFNQSSNLTTHKKIHTSEKPY KCEECGKSFNQFSSLNIHKIIHTGEKPYKCGDYGRAFNLSSNLTTHKKIHTGEKPYKCEY GKT
Nucleotide Sequence (with vector) for pF1KB7065 Download>pF1KB7065 5462 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTAGCCAAA CCCCCAGTAATGTCTTTTCATTTTGCCCAAGACCTTTGGCCAGAGCAGAACATAAAAGAT TCTTTCCAGAAAGTGACACTGAGAAGATACGGAAAATGTGAATATGAGAATTTACAGTTA AGAAAAGGCTGTAAACATGTGGATGAGTGTACGGGGCACAAAGGAGGTCATAATACAGTT AACCAATGTTTGACAGCTACCCCAAGCAAAATATTCCAGTGTAATAAATATGTGAAAGTC TTTGATAAATTTTCAAATTCAAATAGATATAAGAGAAGACATACAGGAAACAAACACTTC AAATGTAAAGAATGTAGCAAATCATTTTGCGTGCTTTCACAACTAACTCAGCATAGAAGA ATTCATACTAGAGTGAATTCCTACAAATGTGAAGAATGTGGAAAAGCCTTTAACTGGTTC TCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAAAAGCCCTACAAATGTGAAGAA TGTGGCAAAGCCTTTAACCAGTCCTCACAACTTACTAGGCATAAGATAATTCATACTGAA GAGAAACCCAACAAATGTGAAGAATGTGGCAAGGCCTTTAAACAGGCCTCACACCTTACT ATACATAAAATAATTCATACTGGAGAAAAACCTTACAAATATGAAGAATGTGGCAAAGTC TTTAGCCAGTCCTCACACCTTACTACACAAAAGATACTTCACACTGGAGAGAACCTCTAC AAGTGTAAAGAATGTGGAAAAGCTTTTAACCTATTCTCAAATCTTACTAACCATAAGAGA ATTCATGCTGGGGAGAAACCCTACAAATGTAAAGAATGTGGCAGAGCTTTTAACATATCC TCAAACCTTAATAAACAGGAGAAAATTCATACTGGAGGGAAACTCAACAAATGTGAAGAA TGTGACAAAGCTTTTAACCGATCCTTAAAACTTACTGCACATAAGAAAATTCTAATGGAA GAGAAACCCTACAAATGTGAAGAATGTGGCAAAGTCTTTAACCAGTTCTCAACTCTTACT AGACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCT TTTAACCAATCTTCAAACCTTACTGAACATAAGAAAATTCATACTGCAGAGAAATCCTAT AAATGTGAAGAATGTGGCAAAGCTTTTAACCAACACTCAAACCTAATTAACCATAGGAAA ATTTATTCTGGAGAGAAACCATACAAATGTGAAGAATGTGGAAAAGCTTTTAATCGATCC TCAACCCTTACTAGACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAA TGTGACAGAGCTTTTAGCCAGTCTTCAAACCTTACTGAACATAAGAAAATTCATACTGGA GAGAAACCCTATAAATGTGAGGAATGTGGCAAAGCTTTTAACCGATTCTCAACCCTTACT AAACATAAGAGAATTCATACTGGAGAAAAACCCTATAAATGTGAAGAATGTGGAAAAGCC TTTAATCAATCCTATCAACTTACTAGACATAAGATAGTTCATACTAAAGAGAAACTCAAC AAATGTGAAGAATTTGGCAAGGCCTTTAAACAGTCCTCACACCGTACTATACATAAAATT ATTCATACTGGAGAGAAACCCTACAAATGTGAAGAACATGGCAAAGTTTTTAACCAGTCC TCAAACCTTACTACACAAAAGATAATTCATACTGGAGAGAACCTCTACAAATTTGAAGAA CATGGAAAAGCTTTTAACCTATTCTCAAACATTACTAACCATAAGATAATTTATACTGGA GAGAAACCCCACAAATGTGAAGAATGTGGAAAAGCTTATAACCGATTCTCAAACCTAACT ATACATAAGAGAATTCATACGGGAGAGAAACCTTACCAATGTGCAGAATGTGGCAAAGCC TTTAACTGCTCCTCAACCCTTAATAGACATAAGATAATTCATACTGGAGAGAAACCTTAC AAATGTAAAGAATGTGGCAAAGCTTTTAACCTATCCTCAACCCTTACTGCACATAAGAAA ATTCATACTGGAGAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCTTTTAACCAATCC TCAAACCTTACTACACATAAGAAAATTCATACTTCAGAGAAACCCTACAAATGTGAAGAA TGTGGCAAATCCTTTAACCAGTTCTCATCTCTTAATATACATAAGATAATTCATACTGGA GAGAAACCCTACAAATGTGGAGATTATGGCAGAGCTTTCAACCTATCCTCAAATCTTACT ACACATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGAGTATGGCAAAACTGTT TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC AT
more Linker info
