IRX4 ORF clone pF1KB5973

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Flexi ORF Clone pF1KB5973

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Clone info.

Species

human

Clone Name

pF1KB5973 Sequence (with vector) Restriction Map

Product ID

FXC03449

HaloTag Clone PID

FHC03449

ORF Sequence

DNA sequence (1557 bp)
Protein sequence (519 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527533]

Gene

KIBB5973

Symbol

IRX4

Alias : IRXA3

Description

iroquois homeobox 4, transcript variant 5

Original Clone ID

cs00673

Features of the cloned ORF sequence

Description

Length: 1557 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 519 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3867.1 8.9e-139 100.0 IRX4 CCDS75225.1 3.7e-101 95.2 IRX4 CCDS32449.1 1.4e-30 44.1 IRX6 CCDS10750.1 2e-23 36.7 IRX3 CCDS10751.1 2.2e-23 38.9 IRX5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 145 202 PF00046 Homeobox HMMSmart IPR001356 142 207 SM00389 Homeobox IPR003893 361 378 SM00548 Iroquois-class homeodomain protein ProfileScan IPR001356 140 203 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057442 519 606199 100.0 100.0 NP_001265561 519 606199 100.0 100.0 NP_001265563 519 606199 100.0 100.0 NP_001265562 545 606199 95.2 100.0 NP_001265564 545 606199 95.2 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5973 Download

>KIBB5973  1557 bp
ATGTCCTACCCGCAGTTTGGATACCCCTACTCCTCGGCTCCCCAGTTCTTGATGGCCACC
AACTCCCTGAGCACGTGCTGCGAGTCCGGAGGCCGCACGCTGGCGGACTCCGGGCCCGCC
GCCTCGGCCCAGGCGCCGGTCTACTGCCCGGTCTACGAGAGCCGGCTGCTGGCCACCGCG
CGCCACGAGCTCAACTCGGCCGCGGCGCTGGGCGTCTATGGGGGTCCCTATGGCGGATCG
CAGGGCTATGGCAACTACGTGACCTACGGCTCGGAGGCGTCCGCCTTCTACTCGCTGAAC
AGCTTTGATTCCAAGGATGGTTCGGGATCTGCGCATGGGGGCCTGGCACCAGCCGCTGCC
GCCTACTACCCTTACGAGCCAGCTCTGGGCCAGTACCCCTATGACAGGTATGGAACCATG
GACAGCGGCACGCGGCGCAAGAACGCCACGCGCGAGACCACCAGCACGCTCAAGGCCTGG
CTGCAGGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATC
ATCACCAAGATGACCCTCACACAGGTCTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTC
AAGAAGGAGAACAAGATGACGTGGCCGCCGCGGAACAAGTGCGCAGACGAGAAGCGGCCC
TACGCGGAGGGCGAGGAGGAGGAGGGGGGCGAGGAGGAGGCGCGGGAGGAGCCCCTCAAG
AGCTCCAAGAACGCAGAGCCCGTGGGCAAAGAGGAGAAGGAGCTGGAGCTTAGTGACTTG
GACGACTTCGACCCGCTGGAAGCAGAGCCGCCGGCGTGCGAGCTGAAGCCGCCCTTCCAC
TCCCTGGACGGCGGTCTGGAGCGCGTCCCCGCCGCGCCCGACGGCCCGGTCAAGGAGGCC
TCAGGCGCGCTCCGGATGTCTCTGGCCGCGGGTGGCGGAGCTGCTCTGGACGAGGACCTG
GAGAGGGCCCGGAGCTGTCTCCGCAGCGCGGCGGCCGGGCCGGAGCCACTGCCGGGCGCA
GAGGGCGGCCCTCAGGTCTGCGAGGCCAAGCTGGGGTTTGTGCCGGCGGGGGCGTCGGCA
GGCCTGGAGGCTAAGCCGCGTATCTGGTCCCTGGCCCACACAGCCACCGCCGCTGCCGCC
GCCGCCACCTCCCTGAGCCAGACTGAGTTTCCGTCGTGCATGCTCAAGCGCCAAGGTCCC
GCGGCCCCTGCGGCTGTGTCCTCCGCGCCCGCCACGTCCCCGTCTGTGGCCCTTCCCCAC
TCTGGCGCCCTGGACAGGCACCAGGACTCCCCGGTAACCAGTCTCAGAAACTGGGTGGAC
GGGGTCTTCCACGACCCCATCCTCAGGCACAGCACTTTGAACCAGGCCTGGGCCACCGCC
AAGGGCGCCCTCCTGGACCCCGGGCCTCTGGGACGCTCGCTGGGGGCGGGCGCGAACGTG
CTGACTGCACCCCTGGCCCGCGCCTTTCCGCCTGCCGTGCCCCAGGACGCCCCAGCTGCA
GGCGCCGCCAGGGAGCTGCTCGCCCTGCCCAAGGCCGGCGGCAAACCCTTCTGCGCC

ORF Protein

Cloned ORF protein sequence for pF1KB5973 Download

>KIBB5973  519 aa
MSYPQFGYPYSSAPQFLMATNSLSTCCESGGRTLADSGPAASAQAPVYCPVYESRLLATA
RHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDGSGSAHGGLAPAAA
AYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAI
ITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEAREEPLK
SSKNAEPVGKEEKELELSDLDDFDPLEAEPPACELKPPFHSLDGGLERVPAAPDGPVKEA
SGALRMSLAAGGGAALDEDLERARSCLRSAAAGPEPLPGAEGGPQVCEAKLGFVPAGASA
GLEAKPRIWSLAHTATAAAAAATSLSQTEFPSCMLKRQGPAAPAAVSSAPATSPSVALPH
SGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRSLGAGANV
LTAPLARAFPPAVPQDAPAAGAARELLALPKAGGKPFCA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5973 Download

>pF1KB5973  4670 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCTACCCG
CAGTTTGGATACCCCTACTCCTCGGCTCCCCAGTTCTTGATGGCCACCAACTCCCTGAGC
ACGTGCTGCGAGTCCGGAGGCCGCACGCTGGCGGACTCCGGGCCCGCCGCCTCGGCCCAG
GCGCCGGTCTACTGCCCGGTCTACGAGAGCCGGCTGCTGGCCACCGCGCGCCACGAGCTC
AACTCGGCCGCGGCGCTGGGCGTCTATGGGGGTCCCTATGGCGGATCGCAGGGCTATGGC
AACTACGTGACCTACGGCTCGGAGGCGTCCGCCTTCTACTCGCTGAACAGCTTTGATTCC
AAGGATGGTTCGGGATCTGCGCATGGGGGCCTGGCACCAGCCGCTGCCGCCTACTACCCT
TACGAGCCAGCTCTGGGCCAGTACCCCTATGACAGGTATGGAACCATGGACAGCGGCACG
CGGCGCAAGAACGCCACGCGCGAGACCACCAGCACGCTCAAGGCCTGGCTGCAGGAGCAC
CGCAAGAACCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATCATCACCAAGATG
ACCCTCACACAGGTCTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTCAAGAAGGAGAAC
AAGATGACGTGGCCGCCGCGGAACAAGTGCGCAGACGAGAAGCGGCCCTACGCGGAGGGC
GAGGAGGAGGAGGGGGGCGAGGAGGAGGCGCGGGAGGAGCCCCTCAAGAGCTCCAAGAAC
GCAGAGCCCGTGGGCAAAGAGGAGAAGGAGCTGGAGCTTAGTGACTTGGACGACTTCGAC
CCGCTGGAAGCAGAGCCGCCGGCGTGCGAGCTGAAGCCGCCCTTCCACTCCCTGGACGGC
GGTCTGGAGCGCGTCCCCGCCGCGCCCGACGGCCCGGTCAAGGAGGCCTCAGGCGCGCTC
CGGATGTCTCTGGCCGCGGGTGGCGGAGCTGCTCTGGACGAGGACCTGGAGAGGGCCCGG
AGCTGTCTCCGCAGCGCGGCGGCCGGGCCGGAGCCACTGCCGGGCGCAGAGGGCGGCCCT
CAGGTCTGCGAGGCCAAGCTGGGGTTTGTGCCGGCGGGGGCGTCGGCAGGCCTGGAGGCT
AAGCCGCGTATCTGGTCCCTGGCCCACACAGCCACCGCCGCTGCCGCCGCCGCCACCTCC
CTGAGCCAGACTGAGTTTCCGTCGTGCATGCTCAAGCGCCAAGGTCCCGCGGCCCCTGCG
GCTGTGTCCTCCGCGCCCGCCACGTCCCCGTCTGTGGCCCTTCCCCACTCTGGCGCCCTG
GACAGGCACCAGGACTCCCCGGTAACCAGTCTCAGAAACTGGGTGGACGGGGTCTTCCAC
GACCCCATCCTCAGGCACAGCACTTTGAACCAGGCCTGGGCCACCGCCAAGGGCGCCCTC
CTGGACCCCGGGCCTCTGGGACGCTCGCTGGGGGCGGGCGCGAACGTGCTGACTGCACCC
CTGGCCCGCGCCTTTCCGCCTGCCGTGCCCCAGGACGCCCCAGCTGCAGGCGCCGCCAGG
GAGCTGCTCGCCCTGCCCAAGGCCGGCGGCAAACCCTTCTGCGCCGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT