EPB42 ORF clone pF1KB5716

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Flexi ORF Clone pF1KB5716

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Clone info.

Species

human

Clone Name

pF1KB5716 Sequence (with vector) Restriction Map

Product ID

FXC03749

HaloTag Clone PID

FHC03749

ORF Sequence

DNA sequence (2163 bp)
Protein sequence (721 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527822]

Gene

KIBB5716

Symbol

EPB42

Alias : PA, SPH5

Description

erythrocyte membrane protein band 4.2, transcript variant 1

Original Clone ID

cs01711

Features of the cloned ORF sequence

Description

Length: 2163 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 721 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10093.1 0 100.0 EPB42 CCDS45249.1 0 100.0 EPB42 CCDS33435.1 7.2e-60 30.8 TGM3 CCDS2723.1 7.5e-59 29.5 TGM4 CCDS9622.1 4.2e-58 27.6 TGM1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001102 36 154 PF00868 Transglutaminase IPR002931 262 380 PF01841 Transglutaminase-like IPR008958 506 608 PF00927 Transglutaminase IPR008958 618 714 PF00927 Transglutaminase HMMSmart IPR002931 290 383 SM00460 Transglutaminase-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 10 STGLAGLYAAPAASPVFIKGSGM 32 SECONDARY 23 2 297 QAWVLAAVACTVLRCLGIPARVV 319 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011519651 721 177070,612690 100.0 100.0 XP_011519653 721 177070,612690 100.0 100.0 NP_000110 721 177070,612690 100.0 100.0 XP_011519652 721 177070,612690 100.0 100.0 NP_001107606 691 177070,612690 100.0 95.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5716 Download

>KIBB5716  2163 bp
ATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCC
GCAGCATCACCTGTTTTCATTAAAGGAAGTGGGATGGATGCCCTGGGTATCAAGAGCTGT
GACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCGGCGC
CTCTTTGTGAGGAGGGGGCAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGT
GCATTTCTGCCTGCCCTGAAGAAGGTGGCCCTCACTGCACAAACTGGAGAGCAGCCTTCC
AAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGG
AGTGCAGTGGTGGAGGAGAGAGATGCCCAGTCCTGGACCATCTCTGTGACCACACCTGCG
GACGCTGTCATTGGCCACTACTCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTC
TTGGGTCAGTTCACACTGCTTTTTAACCCCTGGAATAGAGAGGATGCTGTGTTCCTGAAG
AATGAGGCTCAGCGCATGGAGTACTTGTTGAACCAGAATGGTCTCATCTACCTGGGTACA
GCTGACTGCATCCAGGCAGAGTCCTGGGACTTTGGCCAGTTCGAGGGGGATGTCATTGAC
CTCAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCAC
GTGGCCCGTGTGTTGGGTGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCACC
CCGCAGACCCAGGCCACCCAGGAAGGGGCCTTGCTGAACAAGCGCCGGGGCAGCGTGCCC
ATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTGGGTG
TTGGCTGCTGTTGCTTGCACAGTGCTGCGATGCCTGGGAATCCCTGCCCGCGTGGTGACC
ACGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAATACTATAATGAG
GAGGGACTTCAGAACGGAGAAGGCCAGAGAGGCAGAATCTGGATCTTCCAGACTTCCACA
GAGTGCTGGATGACGCGGCCTGCCTTGCCCCAGGGTTATGATGGATGGCAGATTCTGCAC
CCAAGTGCTCCTAATGGAGGTGGAGTCCTGGGGTCCTGTGATCTGGTGCCGGTCAGAGCA
GTCAAGGAGGGGACGCTGGGGCTGACCCCAGCAGTGTCAGACCTTTTTGCTGCCATAAAT
GCCTCATGTGTGGTCTGGAAGTGCTGTGAGGATGGGACACTGGAGTTGACTGACTCCAAC
ACAAAGTATGTTGGCAACAACATCAGCACCAAGGGTGTGGGCAGTGACCGCTGCGAGGAC
ATCACTCAGAACTACAAGTATCCTGAAGGGTCTCTTCAGGAAAAAGAGGTGCTGGAGAGA
GTCGAGAAAGAGAAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAG
ACTGCCAGTCCTCTGTACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGAGAGGGGAT
GCCCAGATCTCAGTGACGCTGGTTAATCACAGTGAGCAGGAGAAGGCAGTGCAGCTGGCA
ATTGGGGTCCAGGCTGTACACTACAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGAAG
CTGCACCTCACGCTCAGTGCCAACCTGGAAAAGATAATAACCATCGGCCTGTTCTTCTCC
AATTTTGAGCGAAACCCACCCGAGAACACCTTCCTTAGACTCACCGCCATGGCAACACAC
TCTGAATCCAACCTTAGCTGCTTTGCTCAGGAAGACATTGCCATTTGTAGACCACACCTT
GCCATCAAGATGCCAGAGAAAGCAGAGCAGTATCAACCCCTCACAGCCTCAGTCAGCCTC
CAGAACTCCCTAGATGCCCCCATGGAGGACTGTGTGATCTCCATCCTGGGAAGGGGGCTC
ATTCACAGAGAGAGGAGCTACAGATTCCGTTCAGTGTGGCCTGAAAACACCATGTGTGCC
AAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACTGC
AACATGTTCCAGAACCTAACCAACTATAAAAGCGTCACCGTGGTAGCCCCTGAACTATCA
GCT

ORF Protein

Cloned ORF protein sequence for pF1KB5716 Download

>KIBB5716  721 aa
MGQGEPSQRSTGLAGLYAAPAASPVFIKGSGMDALGIKSCDFQAARNNEEHHTKALSSRR
LFVRRGQPFTIILYFRAPVRAFLPALKKVALTAQTGEQPSKINRTQATFPISSLGDRKWW
SAVVEERDAQSWTISVTTPADAVIGHYSLLLQVSGRKQLLLGQFTLLFNPWNREDAVFLK
NEAQRMEYLLNQNGLIYLGTADCIQAESWDFGQFEGDVIDLSLRLLSKDKQVEKWSQPVH
VARVLGALLHFLKEQRVLPTPQTQATQEGALLNKRRGSVPILRQWLTGRGRPVYDGQAWV
LAAVACTVLRCLGIPARVVTTFASAQGTGGRLLIDEYYNEEGLQNGEGQRGRIWIFQTST
ECWMTRPALPQGYDGWQILHPSAPNGGGVLGSCDLVPVRAVKEGTLGLTPAVSDLFAAIN
ASCVVWKCCEDGTLELTDSNTKYVGNNISTKGVGSDRCEDITQNYKYPEGSLQEKEVLER
VEKEKMEREKDNGIRPPSLETASPLYLLLKAPSSLPLRGDAQISVTLVNHSEQEKAVQLA
IGVQAVHYNGVLAAKLWRKKLHLTLSANLEKIITIGLFFSNFERNPPENTFLRLTAMATH
SESNLSCFAQEDIAICRPHLAIKMPEKAEQYQPLTASVSLQNSLDAPMEDCVISILGRGL
IHRERSYRFRSVWPENTMCAKFQFTPTHVGLQRLTVEVDCNMFQNLTNYKSVTVVAPELS
A

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5716 Download

>pF1KB5716  5276 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGACAGGGT
GAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCCGCAGCATCACCT
GTTTTCATTAAAGGAAGTGGGATGGATGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCA
GCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCGGCGCCTCTTTGTGAGG
AGGGGGCAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCT
GCCCTGAAGAAGGTGGCCCTCACTGCACAAACTGGAGAGCAGCCTTCCAAGATCAACAGG
ACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGGAGTGCAGTGGTG
GAGGAGAGAGATGCCCAGTCCTGGACCATCTCTGTGACCACACCTGCGGACGCTGTCATT
GGCCACTACTCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCTTGGGTCAGTTC
ACACTGCTTTTTAACCCCTGGAATAGAGAGGATGCTGTGTTCCTGAAGAATGAGGCTCAG
CGCATGGAGTACTTGTTGAACCAGAATGGTCTCATCTACCTGGGTACAGCTGACTGCATC
CAGGCAGAGTCCTGGGACTTTGGCCAGTTCGAGGGGGATGTCATTGACCTCAGCCTGCGC
TTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTG
TTGGGTGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAG
GCCACCCAGGAAGGGGCCTTGCTGAACAAGCGCCGGGGCAGCGTGCCCATCCTGCGGCAG
TGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTGGGTGTTGGCTGCTGTT
GCTTGCACAGTGCTGCGATGCCTGGGAATCCCTGCCCGCGTGGTGACCACGTTTGCCTCA
GCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAATACTATAATGAGGAGGGACTTCAG
AACGGAGAAGGCCAGAGAGGCAGAATCTGGATCTTCCAGACTTCCACAGAGTGCTGGATG
ACGCGGCCTGCCTTGCCCCAGGGTTATGATGGATGGCAGATTCTGCACCCAAGTGCTCCT
AATGGAGGTGGAGTCCTGGGGTCCTGTGATCTGGTGCCGGTCAGAGCAGTCAAGGAGGGG
ACGCTGGGGCTGACCCCAGCAGTGTCAGACCTTTTTGCTGCCATAAATGCCTCATGTGTG
GTCTGGAAGTGCTGTGAGGATGGGACACTGGAGTTGACTGACTCCAACACAAAGTATGTT
GGCAACAACATCAGCACCAAGGGTGTGGGCAGTGACCGCTGCGAGGACATCACTCAGAAC
TACAAGTATCCTGAAGGGTCTCTTCAGGAAAAAGAGGTGCTGGAGAGAGTCGAGAAAGAG
AAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCT
CTGTACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGAGAGGGGATGCCCAGATCTCA
GTGACGCTGGTTAATCACAGTGAGCAGGAGAAGGCAGTGCAGCTGGCAATTGGGGTCCAG
GCTGTACACTACAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGAAGCTGCACCTCACG
CTCAGTGCCAACCTGGAAAAGATAATAACCATCGGCCTGTTCTTCTCCAATTTTGAGCGA
AACCCACCCGAGAACACCTTCCTTAGACTCACCGCCATGGCAACACACTCTGAATCCAAC
CTTAGCTGCTTTGCTCAGGAAGACATTGCCATTTGTAGACCACACCTTGCCATCAAGATG
CCAGAGAAAGCAGAGCAGTATCAACCCCTCACAGCCTCAGTCAGCCTCCAGAACTCCCTA
GATGCCCCCATGGAGGACTGTGTGATCTCCATCCTGGGAAGGGGGCTCATTCACAGAGAG
AGGAGCTACAGATTCCGTTCAGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCCAGTTC
ACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACTGCAACATGTTCCAG
AACCTAACCAACTATAAAAGCGTCACCGTGGTAGCCCCTGAACTATCAGCTGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT