TDRKH ORF clone pF1KB5539

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Flexi ORF Clone pF1KB5539

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Clone info.

Species

human

Clone Name

pF1KB5539 Sequence (with vector) Restriction Map

Product ID

FXC03566

HaloTag Clone PID

FHC03566

ORF Sequence

DNA sequence (1683 bp)
Protein sequence (561 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527643]

Gene

KIBB5539

Symbol

TDRKH

Alias : TDRD2

Description

tudor and KH domain containing, transcript variant 3

Original Clone ID

ef03729

Features of the cloned ORF sequence

Description

Length: 1683 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 561 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41394.1 1.5e-204 100.0 TDRKH CCDS41395.1 1.3e-149 92.0 TDRKH CCDS7588.1 7.8e-11 31.2 TDRD1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018111 55 115 PF00013 K Homology IPR018111 127 190 PF00013 K Homology IPR008191 304 422 PF00567 Maternal tudor protein HMMSmart IPR004087 51 120 SM00322 K Homology IPR004087 123 195 SM00322 K Homology IPR002999 352 410 SM00333 Tudor domain ProfileScan IPR004088 52 115 PS50084 K Homology IPR004088 124 190 PS50084 K Homology IPR018351 353 412 PS50304 Tudor subgroup
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016855612 561 609501 100.0 100.0 XP_016855616 561 609501 100.0 100.0 NP_006853 561 609501 100.0 100.0 XP_016855613 561 609501 100.0 100.0 XP_016855614 561 609501 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5539 Download

>KIBB5539  1683 bp
ATGTCTACTGAACGGACTTCTTGGACAAGCCTGTCCACCATTCAGAAAATAGCCCTGGGC
CTTGGGATCCCAGCCAGTGCAACAGTTGCCTATATCCTATACCGCAGGTATAGGGAAAGC
AGAGAAGAGCGGCTGACATTTGTTGGGGAAGATGACATTGAGATAGAGATGCGGGTTCCC
CAGGAGGCTGTGAAACTCATCATTGGCCGGCAAGGAGCCAATATTAAACAGCTGCGGAAA
CAGACAGGTGCTCGGATTGATGTGGACACAGAGGATGTAGGCGATGAGCGAGTGCTGCTT
ATCAGTGGTTTTCCTGTTCAGGTGTGCAAGGCCAAAGCAGCAATCCATCAGATCCTGACA
GAGAATACCCCAGTGTCTGAGCAGCTTTCAGTTCCCCAGAGATCTGTGGGCAGAATCATA
GGGAGAGGCGGCGAGACAATTCGTTCTATCTGTAAGGCATCTGGAGCCAAAATTACCTGT
GACAAAGAATCAGAAGGGACATTACTACTATCAAGACTTATAAAAATCTCAGGAACACAG
AAGGAAGTGGCAGCAGCCAAGCATTTGATACTGGAGAAAGTTTCAGAAGATGAAGAACTT
CGGAAGAGAATTGCTCATTCTGCAGAAACCAGGGTCCCACGCAAACAGCCAATCAGTGTG
AGAAGAGAAGACATGACAGAGCCAGGTGGAGCTGGAGAGCCAGCATTATGGAAAAACACC
AGTTCTAGCATGGAGCCGACTGCACCCCTGGTGACTCCTCCACCCAAAGGAGGAGGCGAC
ATGGCTGTGGTAGTGTCAAAGGAAGGTTCCTGGGAGAAACCTAGTGATGACAGCTTTCAG
AAGTCTGAAGCCCAGGCCATCCCAGAGATGCCCATGTTTGAAATCCCCAGTCCTGACTTC
AGTTTTCATGCTGATGAGTACCTAGAAGTCTACGTTTCTGCTTCTGAGCACCCTAACCAC
TTCTGGATCCAGATCGTTGGCTCCCGCAGCCTGCAATTGGATAAGCTTGTCAATGAGATG
ACCCAGCACTATGAGAATAGTGTGCCTGAAGACTTGACTGTGCATGTAGGAGACATTGTA
GCAGCACCTTTACCTACAAATGGTTCCTGGTATCGAGCCCGGGTCCTCGGCACCTTGGAG
AATGGGAACTTGGACCTCTATTTTGTTGACTTTGGAGATAATGGAGATTGCCCACTGAAG
GACCTCAGGGCTCTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAATGTAGT
CTGGCACGGATTGCTCCCTCAGGTGACCAGTGGGAAGAGGAAGCTTTGGATGAGTTTGAT
AGACTCACTCATTGTGCTGACTGGAAGCCTCTGGTAGCCAAGATCTCTAGCTATGTCCAG
ACTGGGATCTCAACTTGGCCAAAGATCTACTTATATGATACTAGCAATGGGAAGAAACTT
GATATTGGGCTAGAATTAGTACACAAAGGATACGCAATTGAGCTTCCTGAAGACATAGAA
GAAAACAGAGCTGTCCCAGACATGTTGAAGGACATGGCCACAGAAACAGATGCCTCTCTC
AGCACGTTGCTCACTGAGACCAAAAAGAGCTCTGGAGAGATAACACATACCCTGTCCTGC
CTCAGCTTATCAGAAGCTGCTTCCATGTCTGGTGATGATAACCTTGAAGATGACTACTTA
CTC

ORF Protein

Cloned ORF protein sequence for pF1KB5539 Download

>KIBB5539  561 aa
MSTERTSWTSLSTIQKIALGLGIPASATVAYILYRRYRESREERLTFVGEDDIEIEMRVP
QEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILT
ENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQ
KEVAAAKHLILEKVSEDEELRKRIAHSAETRVPRKQPISVRREDMTEPGGAGEPALWKNT
SSSMEPTAPLVTPPPKGGGDMAVVVSKEGSWEKPSDDSFQKSEAQAIPEMPMFEIPSPDF
SFHADEYLEVYVSASEHPNHFWIQIVGSRSLQLDKLVNEMTQHYENSVPEDLTVHVGDIV
AAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECS
LARIAPSGDQWEEEALDEFDRLTHCADWKPLVAKISSYVQTGISTWPKIYLYDTSNGKKL
DIGLELVHKGYAIELPEDIEENRAVPDMLKDMATETDASLSTLLTETKKSSGEITHTLSC
LSLSEAASMSGDDNLEDDYLL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5539 Download

>pF1KB5539  4796 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCTACTGAA
CGGACTTCTTGGACAAGCCTGTCCACCATTCAGAAAATAGCCCTGGGCCTTGGGATCCCA
GCCAGTGCAACAGTTGCCTATATCCTATACCGCAGGTATAGGGAAAGCAGAGAAGAGCGG
CTGACATTTGTTGGGGAAGATGACATTGAGATAGAGATGCGGGTTCCCCAGGAGGCTGTG
AAACTCATCATTGGCCGGCAAGGAGCCAATATTAAACAGCTGCGGAAACAGACAGGTGCT
CGGATTGATGTGGACACAGAGGATGTAGGCGATGAGCGAGTGCTGCTTATCAGTGGTTTT
CCTGTTCAGGTGTGCAAGGCCAAAGCAGCAATCCATCAGATCCTGACAGAGAATACCCCA
GTGTCTGAGCAGCTTTCAGTTCCCCAGAGATCTGTGGGCAGAATCATAGGGAGAGGCGGC
GAGACAATTCGTTCTATCTGTAAGGCATCTGGAGCCAAAATTACCTGTGACAAAGAATCA
GAAGGGACATTACTACTATCAAGACTTATAAAAATCTCAGGAACACAGAAGGAAGTGGCA
GCAGCCAAGCATTTGATACTGGAGAAAGTTTCAGAAGATGAAGAACTTCGGAAGAGAATT
GCTCATTCTGCAGAAACCAGGGTCCCACGCAAACAGCCAATCAGTGTGAGAAGAGAAGAC
ATGACAGAGCCAGGTGGAGCTGGAGAGCCAGCATTATGGAAAAACACCAGTTCTAGCATG
GAGCCGACTGCACCCCTGGTGACTCCTCCACCCAAAGGAGGAGGCGACATGGCTGTGGTA
GTGTCAAAGGAAGGTTCCTGGGAGAAACCTAGTGATGACAGCTTTCAGAAGTCTGAAGCC
CAGGCCATCCCAGAGATGCCCATGTTTGAAATCCCCAGTCCTGACTTCAGTTTTCATGCT
GATGAGTACCTAGAAGTCTACGTTTCTGCTTCTGAGCACCCTAACCACTTCTGGATCCAG
ATCGTTGGCTCCCGCAGCCTGCAATTGGATAAGCTTGTCAATGAGATGACCCAGCACTAT
GAGAATAGTGTGCCTGAAGACTTGACTGTGCATGTAGGAGACATTGTAGCAGCACCTTTA
CCTACAAATGGTTCCTGGTATCGAGCCCGGGTCCTCGGCACCTTGGAGAATGGGAACTTG
GACCTCTATTTTGTTGACTTTGGAGATAATGGAGATTGCCCACTGAAGGACCTCAGGGCT
CTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAATGTAGTCTGGCACGGATT
GCTCCCTCAGGTGACCAGTGGGAAGAGGAAGCTTTGGATGAGTTTGATAGACTCACTCAT
TGTGCTGACTGGAAGCCTCTGGTAGCCAAGATCTCTAGCTATGTCCAGACTGGGATCTCA
ACTTGGCCAAAGATCTACTTATATGATACTAGCAATGGGAAGAAACTTGATATTGGGCTA
GAATTAGTACACAAAGGATACGCAATTGAGCTTCCTGAAGACATAGAAGAAAACAGAGCT
GTCCCAGACATGTTGAAGGACATGGCCACAGAAACAGATGCCTCTCTCAGCACGTTGCTC
ACTGAGACCAAAAAGAGCTCTGGAGAGATAACACATACCCTGTCCTGCCTCAGCTTATCA
GAAGCTGCTTCCATGTCTGGTGATGATAACCTTGAAGATGACTACTTACTCGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT