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SpecieshumanProduct IDFXC11572Cloning SiteSgfI-PmeI
Because the PmeI site of this clone is affected by EcoKI methylase, we strongly recommend use of EcoKI methylase-free E.coli strain for preparation of this clone.GeneKIBB5139SymbolREPIN1
Alias : AP4, RIP60, ZNF464, Zfp464Descriptionreplication initiator 1, transcript variant 1Original Clone IDbj00259
Length: 1701 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 567 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS43677.1 6.1e-121 100.0 REPIN1 CCDS47745.1 6.5e-121 100.0 REPIN1 CCDS46212.1 3.7e-30 36.6 ZNF814 CCDS12499.1 4.3e-30 35.5 ZNF585A CCDS74353.1 4.5e-30 35.5 ZNF585A
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR007087 177 199 PF00096 Zinc finger IPR007087 264 286 PF00096 Zinc finger IPR007087 459 481 PF00096 Zinc finger IPR007087 487 509 PF00096 Zinc finger IPR007087 515 537 PF00096 Zinc finger HMMSmart IPR015880 57 77 SM00355 Zinc finger IPR015880 85 107 SM00355 Zinc finger IPR015880 116 138 SM00355 Zinc finger IPR015880 145 168 SM00355 Zinc finger IPR015880 177 199 SM00355 Zinc finger IPR015880 236 258 SM00355 Zinc finger IPR015880 264 286 SM00355 Zinc finger IPR015880 292 314 SM00355 Zinc finger IPR015880 375 397 SM00355 Zinc finger IPR015880 403 425 SM00355 Zinc finger IPR015880 431 453 SM00355 Zinc finger IPR015880 459 481 SM00355 Zinc finger IPR015880 487 509 SM00355 Zinc finger IPR015880 515 537 SM00355 Zinc finger IPR015880 543 565 SM00355 Zinc finger ProfileScan IPR007087 85 112 PS50157 Zinc finger IPR007087 116 143 PS50157 Zinc finger IPR007087 145 173 PS50157 Zinc finger IPR007087 177 204 PS50157 Zinc finger IPR007087 236 263 PS50157 Zinc finger IPR007087 264 291 PS50157 Zinc finger IPR007087 292 319 PS50157 Zinc finger IPR007087 375 402 PS50157 Zinc finger IPR007087 403 430 PS50157 Zinc finger IPR007087 431 458 PS50157 Zinc finger IPR007087 459 486 PS50157 Zinc finger IPR007087 487 514 PS50157 Zinc finger IPR007087 515 542 PS50157 Zinc finger IPR007087 543 567 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001309066 782 600398 35.5 95.8 NP_001309068 782 600398 35.5 95.8 NP_001309067 782 600398 35.5 95.8 NP_001304845 1059 616290 37.9 90.1 NP_149350 1059 616290 37.9 90.1 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB5139 Download>KIBB5139 1701 bp ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTT TCTGGGCCCTCCCAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAA CAAGGCACGTCAGTGGCCCAGTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCC CACTGTCGAAGGCACTTCCCTGGCTGGGTGGCTCTGTGGCTTCACACCCGCCGGTGCCAG GCCCGGCTGCCCTTGCCCTGCCCTGAGTGTGGCCGTCGCTTTCGCCATGCCCCCTTCTTA GCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTGCCACCTC TGTGGGCAGAGCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCT GCAAAGCGGCCCATCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTT CGAGCTCATCTGCGGCGGTGCCACCCTCCCGCCCCGGAGGCCCGGCCCTTCATATGCGGC AACTGTGGCCGGAGCTTTGCCCAGTGGGACCAGCTAGTTGCCCACAAGCGGGTGCACGTA GCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCC GCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGT TGTGGCAAGCGCTTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGC GAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACT TCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGC TTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCG GCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCG GCCGAGCCCACCCCGGCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGGCCCCG CCAGAGCACCCACAGGACCCGATCGAAGCCCCCCCCTCCCTCTACAGCTGCGACGACTGC GGCAGGAGCTTCCGGCTGGAGCGCTTCCTGCGGGCCCACCAGCGGCAGCACACCGGGGAG CGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCGGCAAGAAGACGCACCTGGTGGCG CACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGCTTC TCCCAGGGCAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTG TGTCCCGACTGCGGCAAGGCCTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATC CACACCGGCGAGAAGCCCTACGTCTGCCCCGACTGCGGCAAAGCCTTCAGCCAGAAGTCC AACCTGGTGTCGCACCGGCGCATCCACACGGGCGAGCGGCCCTACGCCTGTCCCGACTGC GACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCACATCCGGGAC GGCGCCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCC CACCAGAAGAAGCACGATGTC
Cloned ORF protein sequence for pF1KB5139 Download>KIBB5139 567 aa MLERRCRGPLAMGLAQPRLLSGPSQESPQTLGKESRGLRQQGTSVAQSGAQAPGRAHRCA HCRRHFPGWVALWLHTRRCQARLPLPCPECGRRFRHAPFLALHRQVHAAATPDLGFACHL CGQSFRGWVALVLHLRAHSAAKRPIACPKCERRFWRRKQLRAHLRRCHPPAPEARPFICG NCGRSFAQWDQLVAHKRVHVAEALEEAAAKALGPRPRGRPAVTAPRPGGDAVDRPFQCAC CGKRFRHKPNLIAHRRVHTGERPHQCPECGKRFTNKPYLTSHRRIHTGEKPYPCKECGRR FRHKPNLLSHSKIHKRSEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPGAP PEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQRQHTGERPFTCAECGKNFGKKTHLVA HSRVHSGERPFACEECGRRFSQGSHLAAHRRDHAPDRPFVCPDCGKAFRHKPYLAAHRRI HTGEKPYVCPDCGKAFSQKSNLVSHRRIHTGERPYACPDCDRSFSQKSNLITHRKSHIRD GAFCCAICGQTFDDEERLLAHQKKHDV
Nucleotide Sequence (with vector) for pF1KB5139 Download>pF1KB5139 4814 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGGAACGT CGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCTGGGCCCTCC CAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTCA GTGGCCCAGTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGG CACTTCCCTGGCTGGGTGGCTCTGTGGCTTCACACCCGCCGGTGCCAGGCCCGGCTGCCC TTGCCCTGCCCTGAGTGTGGCCGTCGCTTTCGCCATGCCCCCTTCTTAGCACTGCACCGC CAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTGCCACCTCTGTGGGCAGAGC TTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAAAGCGGCCC ATCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTG CGGCGGTGCCACCCTCCCGCCCCGGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGG AGCTTTGCCCAGTGGGACCAGCTAGTTGCCCACAAGCGGGTGCACGTAGCTGAGGCCCTG GAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGCGGTGACCGCC CCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGTTGTGGCAAGCGC TTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCAC CAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGC ATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAA CCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGGCCCAGGCCGCC CCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCGGCCGAGCCCACC CCGGCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGGCCCCGCCAGAGCACCCA CAGGACCCGATCGAAGCCCCCCCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTC CGGCTGGAGCGCTTCCTGCGGGCCCACCAGCGGCAGCACACCGGGGAGCGGCCCTTCACC TGCGCCGAGTGCGGGAAGAACTTCGGCAAGAAGACGCACCTGGTGGCGCACTCGCGCGTG CACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGCTTCTCCCAGGGCAGC CATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCCCGACTGC GGCAAGGCCTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAG AAGCCCTACGTCTGCCCCGACTGCGGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCG CACCGGCGCATCCACACGGGCGAGCGGCCCTACGCCTGTCCCGACTGCGACCGCAGCTTC AGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCACATCCGGGACGGCGCCTTCTGC TGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCCCACCAGAAGAAG CACGATGTCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGC AGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGC CACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTT TTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAG CTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCT TGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGC TTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGA GCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTA AACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAA GAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCG GCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCT GATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGAC CTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACG ACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTG CTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAA GTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCA TTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTT GTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCC AGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGC TTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTG GGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTT GGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAG CGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAA TGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATC CACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAG GAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCA TCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCA GGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGG ATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAG GTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGT TCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACA CGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGG CGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATT TGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATC CGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCG CAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTG GAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTA GATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGT GAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTC TGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGG GTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGG TGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGA TAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCT GATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAG TAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGA TGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAA AGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCC TGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGT GGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGA CGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAAT ATGTATCCGCTCAT
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