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SpecieshumanProduct IDFXC01778Cloning SiteSgfI-PmeIGeneKIBB4626SymbolGIT1
Alias : p95-APP1DescriptionG protein-coupled receptor kinase interacting ArfGAP 1, transcript variant 1Original Clone IDfk11141
Length: 2310 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 770 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS42290.1 1.4e-185 100.0 GIT1 CCDS11250.1 4.8e-118 98.8 GIT1 CCDS44968.1 2.9e-89 64.0 GIT2 CCDS9138.1 7e-89 65.1 GIT2 CCDS9139.1 1.6e-85 76.8 GIT2
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001164 8 27 PR00405 Arf GTPase activating protein IPR001164 27 44 PR00405 Arf GTPase activating protein IPR001164 48 69 PR00405 Arf GTPase activating protein HMMPfam IPR001164 5 118 PF01412 Arf GTPase activating protein IPR002110 167 197 PF00023 Ankyrin repeat IPR013724 273 303 PF08518 Spa2 homology (SHD) of GIT IPR013724 337 366 PF08518 Spa2 homology (SHD) of GIT IPR022018 642 765 PF12205 G protein-coupled receptor kinase-interacting protein 1 C term HMMSmart IPR001164 1 124 SM00105 Arf GTPase activating protein IPR002110 132 161 SM00248 Ankyrin repeat IPR002110 166 195 SM00248 Ankyrin repeat IPR002110 199 228 SM00248 Ankyrin repeat IPR013724 273 303 SM00555 Spa2 homology (SHD) of GIT IPR013724 337 367 SM00555 Spa2 homology (SHD) of GIT ProfileScan IPR001164 1 124 PS50115 Arf GTPase activating protein IPR020683 132 221 PS50297 Ankyrin repeat-containing domain IPR002110 166 198 PS50088 Ankyrin repeat
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001078923 770 608434 100.0 100.0 XP_011522986 777 608434 99.1 100.0 NP_054749 761 608434 98.8 100.0 XP_011522987 768 608434 97.9 100.0 XP_016875749 664 608564 63.0 90.9 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB4626 Download>KIBB4626 2310 bp ATGTCCCGAAAGGGGCCGCGAGCGGAGGTGTGTGCGGACTGCAGCGCCCCGGACCCTGGC TGGGCATCCATCAGCAGGGGTGTGCTGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGC CTGGGACGCCACATCTCCATTGTCAAGCACCTTCGCCACAGCGCCTGGCCTCCCACGCTG CTGCAGATGGTGCACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTG CTGGACCCCGCACAAGTGCAGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGTCCAC CCCATCAAGTCAGAGTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTT CCCTGCCGGGACGATGATGGAGTCACCGCCAAAGACCTCAGCAAGCAACTACACTCGAGC GTGCGGACAGGCAACCTGGAGACATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAAC TTCTTCCACCCAGAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACA CTGCAGGCCGAGCTGCTTGTAGTGTATGGGGCTGACCCTGGCTCCCCTGATGTTAATGGC CGCACACCCATTGACTATGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAGGCTGGTT GAGTGCCAATATGAGCTCACTGACCGGCTGGCCTTCTACCTCTGTGGACGCAAGCCGGAT CACAAGAATGGGCATTACATCATCCCACAGATGGCTGACAGATCTCGGCAAAAGTGCATG TCTCAGAGCCTTGACTTATCCGAATTGGCCAAAGCTGCTAAGAAGAAGCTGCAGGCGCTC AGCAACCGGCTTTTTGAGGAACTCGCCATGGACGTGTATGACGAGGTGGATCGAAGAGAA AATGATGCAGTGTGGCTGGCTACCCAAAACCACAGCACTCTGGTGACAGAGCGCAGTGCC GTGCCCTTCCTGCCTGTTAACCCGGAATACTCAGCCACGCGGAATCAGGGGCGACAAAAG CTGGCCCGCTTTAATGCCCGAGAGTTTGCCACCTTGATCATCGACATTCTCAGTGAGGCC AAGCGGAGACAGCAGGGCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCTG CGGAGCCAGAGTGACCTCGACGACCAACACGACTACGACAGCGTGGCCTCTGACGAGGAC ACAGACCAGGAGCCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATG GACTCCTCGGACTTGTCTGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCTGAAGAAG GCCCTGGCTACATCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGC GACGAGCTCCGGAGGCTGCAGCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTC CGGCAGCCTCCAGGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGGGCGGAACACACA CCCATGGCGCCAGGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTTTCCATGTATGAA CCTGGCTCTGCCCTGAAGCCCTTTGGGGGCCCCCCTGGGGACGAGCTCACTACGCGGCTG CAGCCTTTCCACAGCACTGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCT GGCCTTTACCGGATCCGGAAAGGGGTGTCTGCCTCAGCTGTGCCCTTCACTCCCTCCTCC CCGCTGCTGTCCTGCTCCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGC AGTGGAGCCGACAGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGCTGGAA GGGAAGAGGTTTCTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTG GATGGAGACCTAGATCCTGGGCTTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGCAG GTCACCAAGAACATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTC GTGCCCTGCTCAGAGAAGATCCATTTGGCTGTGACCGAGATGGCCTCCCTCTTCCCAAAG AGGCCAGCCCTGGAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACCGG CTGCAGAGTGAGTGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAG CTGCTGACTCAGCAGGTGATCCAGTGCGCCTATGACATCGCCAAGGCTGCCAAGCAGCTG GTCACCATCACCACCCGAGAGAAGAAGCAG
Cloned ORF protein sequence for pF1KB4626 Download>KIBB4626 770 aa MSRKGPRAEVCADCSAPDPGWASISRGVLVCDECCSVHRSLGRHISIVKHLRHSAWPPTL LQMVHTLASNGANSIWEHSLLDPAQVQSGRRKANPQDKVHPIKSEFIRAKYQMLAFVHKL PCRDDDGVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQT LQAELLVVYGADPGSPDVNGRTPIDYARQAGHHELAERLVECQYELTDRLAFYLCGRKPD HKNGHYIIPQMADRSRQKCMSQSLDLSELAKAAKKKLQALSNRLFEELAMDVYDEVDRRE NDAVWLATQNHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSEA KRRQQGKSLSSPTDNLELSLRSQSDLDDQHDYDSVASDEDTDQEPLRSTGATRSNRARSM DSSDLSDGAVTLQEYLELKKALATSEAKVQQLMKVNSSLSDELRRLQREIHKLQAENLQL RQPPGPVPTPPLPSERAEHTPMAPGGSTHRRDRQAFSMYEPGSALKPFGGPPGDELTTRL QPFHSTELEDDAIYSVHVPAGLYRIRKGVSASAVPFTPSSPLLSCSQEGSRHTSKLSRHG SGADSDYENTQSGDPLLGLEGKRFLELGKEEDFHPELESLDGDLDPGLPSTEDVILKTEQ VTKNIQELLRAAQEFKHDSFVPCSEKIHLAVTEMASLFPKRPALEPVRSSLRLLNASAYR LQSECRKTVPPEPGAPVDFQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
Nucleotide Sequence (with vector) for pF1KB4626 Download>pF1KB4626 5423 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCCGAAAG GGGCCGCGAGCGGAGGTGTGTGCGGACTGCAGCGCCCCGGACCCTGGCTGGGCATCCATC AGCAGGGGTGTGCTGGTGTGTGACGAGTGCTGCAGCGTGCACCGGAGCCTGGGACGCCAC ATCTCCATTGTCAAGCACCTTCGCCACAGCGCCTGGCCTCCCACGCTGCTGCAGATGGTG CACACGCTTGCCAGCAACGGGGCCAACTCCATCTGGGAGCACTCCCTGCTGGACCCCGCA CAAGTGCAGAGCGGCCGGCGTAAAGCCAACCCCCAAGACAAAGTCCACCCCATCAAGTCA GAGTTCATCAGGGCCAAGTACCAGATGCTGGCATTTGTGCACAAGCTTCCCTGCCGGGAC GATGATGGAGTCACCGCCAAAGACCTCAGCAAGCAACTACACTCGAGCGTGCGGACAGGC AACCTGGAGACATGTCTGCGCCTGCTCTCCCTGGGTGCCCAGGCCAACTTCTTCCACCCA GAGAAGGGCACCACACCTCTGCACGTGGCTGCCAAGGCAGGACAGACACTGCAGGCCGAG CTGCTTGTAGTGTATGGGGCTGACCCTGGCTCCCCTGATGTTAATGGCCGCACACCCATT GACTATGCCAGGCAGGCGGGGCACCATGAGCTGGCGGAAAGGCTGGTTGAGTGCCAATAT GAGCTCACTGACCGGCTGGCCTTCTACCTCTGTGGACGCAAGCCGGATCACAAGAATGGG CATTACATCATCCCACAGATGGCTGACAGATCTCGGCAAAAGTGCATGTCTCAGAGCCTT GACTTATCCGAATTGGCCAAAGCTGCTAAGAAGAAGCTGCAGGCGCTCAGCAACCGGCTT TTTGAGGAACTCGCCATGGACGTGTATGACGAGGTGGATCGAAGAGAAAATGATGCAGTG TGGCTGGCTACCCAAAACCACAGCACTCTGGTGACAGAGCGCAGTGCCGTGCCCTTCCTG CCTGTTAACCCGGAATACTCAGCCACGCGGAATCAGGGGCGACAAAAGCTGGCCCGCTTT AATGCCCGAGAGTTTGCCACCTTGATCATCGACATTCTCAGTGAGGCCAAGCGGAGACAG CAGGGCAAGAGCCTGAGCAGCCCCACAGACAACCTCGAGCTGTCTCTGCGGAGCCAGAGT GACCTCGACGACCAACACGACTACGACAGCGTGGCCTCTGACGAGGACACAGACCAGGAG CCCCTGCGCAGCACCGGCGCCACTCGGAGCAACCGGGCCCGGAGCATGGACTCCTCGGAC TTGTCTGACGGGGCTGTGACGCTGCAGGAGTACCTGGAGCTGAAGAAGGCCCTGGCTACA TCGGAGGCAAAGGTGCAGCAGCTCATGAAGGTCAACAGTAGCCTGAGCGACGAGCTCCGG AGGCTGCAGCGAGAGATCCACAAGCTGCAGGCGGAGAACCTGCAGCTCCGGCAGCCTCCA GGGCCGGTGCCCACACCTCCACTCCCCAGTGAACGGGCGGAACACACACCCATGGCGCCA GGCGGGAGCACACACCGCAGGGATCGCCAGGCCTTTTCCATGTATGAACCTGGCTCTGCC CTGAAGCCCTTTGGGGGCCCCCCTGGGGACGAGCTCACTACGCGGCTGCAGCCTTTCCAC AGCACTGAGCTAGAGGACGACGCCATCTATTCAGTGCACGTCCCTGCTGGCCTTTACCGG ATCCGGAAAGGGGTGTCTGCCTCAGCTGTGCCCTTCACTCCCTCCTCCCCGCTGCTGTCC TGCTCCCAGGAGGGAAGCCGCCACACGAGCAAGCTTTCCCGCCACGGCAGTGGAGCCGAC AGTGACTATGAGAACACGCAAAGTGGGGACCCACTGCTGGGGCTGGAAGGGAAGAGGTTT CTAGAGCTGGGCAAAGAGGAAGACTTCCACCCAGAGCTGGAAAGCCTGGATGGAGACCTA GATCCTGGGCTTCCCAGCACAGAGGATGTCATCTTGAAGACAGAGCAGGTCACCAAGAAC ATTCAGGAACTGTTGCGGGCAGCCCAGGAGTTCAAGCATGACAGCTTCGTGCCCTGCTCA GAGAAGATCCATTTGGCTGTGACCGAGATGGCCTCCCTCTTCCCAAAGAGGCCAGCCCTG GAGCCAGTGCGGAGCTCACTGCGGCTGCTCAACGCCAGCGCCTACCGGCTGCAGAGTGAG TGCCGGAAGACAGTGCCCCCAGAGCCCGGCGCCCCAGTGGACTTCCAGCTGCTGACTCAG CAGGTGATCCAGTGCGCCTATGACATCGCCAAGGCTGCCAAGCAGCTGGTCACCATCACC ACCCGAGAGAAGAAGCAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGAT CCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTC AGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTG CTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCT ACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCT TCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCT CGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGG GTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTC GTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGA GCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGG CAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA TAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGG GGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTG CTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTAT TACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA CATTCAAATATGTATCCGCTCAT
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