ABCD2 ORF clone pF1KB3282

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Flexi ORF Clone pF1KB3282

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Clone info.

Species

human

Clone Name

pF1KB3282 Sequence (with vector) Restriction Map

Product ID

FXC07785

HaloTag Clone PID

FHC07785

Original Clone PID

ORK07785

ORF Sequence

DNA sequence (2220 bp)
Protein sequence (740 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB489163]

Gene

KIBB3282

Symbol

ABCD2

Alias : ABC39, ALDL1, ALDR, ALDRP, hALDR

Description

ATP-binding cassette, sub-family D (ALD), member 2

Original Clone ID

hh04063

Features of the cloned ORF sequence

Description

Length: 2220 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 740 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8734.1 0 100.0 ABCD2 CCDS14728.1 2.8e-111 65.7 ABCD1 CCDS749.1 1e-60 40.3 ABCD3 CCDS9828.1 2.1e-27 29.0 ABCD4 CCDS44175.1 6.5e-20 35.6 ABCD3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR010509 80 365 PF06472 ABC transporter IPR003439 518 637 PF00005 ABC transporter-like HMMSmart IPR003593 503 689 SM00382 ATPase ProfileScan IPR017940 112 348 PS50929 ABC transporter IPR003439 478 704 PS50893 ABC transporter-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 23 AACLVAAAYALKTLYPIIG 41 SECONDARY 19 2 107 LCLHSVALISRTFLSIYVAGLDG 129 SECONDARY 23 3 141 RTFIIKLIKWLMIAIPATFVNSA 163 PRIMARY 23 4 250 GASPIGPTLLAGLVVYATAKVLK 272 PRIMARY 23 5 350 YVWSSSGLIMVAIPIITATGFA 371 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011536329 740 601081 100.0 100.0 NP_005155 740 601081 100.0 100.0 XP_016874481 674 601081 99.7 90.7 NP_000024 745 300100,300371 65.7 96.4 XP_016857441 586 170995,616278 41.3 80.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3282 Download

>KIBB3282  2220 bp
ATGACACATATGCTAAATGCAGCAGCTGATCGAGTGAAATGGACCAGATCGAGTGCTGCT
AAGAGGGCTGCCTGCCTGGTGGCTGCGGCATATGCTCTGAAAACCCTCTATCCCATCATT
GGCAAGCGTTTAAAGCAATCTGGCCACGGGAAGAAAAAAGCAGCAGCTTACCCTGCTGCA
GAGAACACAGAAATACTGCATTGCACCGAGACCATTTGTGAAAAACCTTCGCCTGGAGTG
AATGCAGATTTCTTCAAACAGCTACTAGAACTTCGGAAAATTTTGTTTCCAAAACTTGTG
ACCACTGAAACAGGGTGGCTCTGCCTGCACTCAGTGGCTCTAATCTCAAGAACCTTTCTT
TCTATCTATGTGGCTGGTCTGGATGGAAAAATCGTGAAAAGCATTGTGGAAAAGAAGCCT
CGGACTTTCATCATCAAATTAATCAAGTGGCTTATGATTGCCATCCCTGCTACCTTCGTC
AACAGTGCAATAAGGTACCTGGAATGCAAATTGGCTTTGGCCTTCAGAACTCGCCTAGTA
GACCACGCCTATGAAACCTATTTTACAAATCAGACTTATTATAAAGTGATCAATATGGAT
GGGAGGCTGGCAAACCCTGACCAATCTCTTACGGAGGATATTATGATGTTCTCCCAATCT
GTGGCTCACTTGTATTCCAATCTGACCAAACCTATTTTAGATGTAATGCTGACCTCCTAT
ACACTCATTCAAACTGCTACATCCAGAGGAGCAAGCCCAATTGGGCCCACCCTACTAGCA
GGACTTGTGGTGTATGCCACTGCTAAAGTGTTAAAAGCCTGTTCTCCCAAATTTGGCAAA
CTGGTGGCAGAGGAAGCACATAGAAAAGGCTATTTGCGGTATGTGCACTCGAGAATTATA
GCCAATGTAGAAGAAATTGCCTTTTACAGAGGACATAAGGTAGAAATGAAACAACTTCAG
AAAAGTTACAAAGCTTTAGCAGATCAGATGAACCTCATTTTATCCAAACGTTTGTGGTAC
ATCATGATAGAACAGTTCCTGATGAAGTATGTTTGGAGCAGCAGTGGACTAATTATGGTG
GCTATACCTATTATCACTGCAACTGGCTTTGCAGATGGTGAGGATGGCCAAAAGCAAGTT
ATGGTTAGTGAACGGACAGAAGCCTTTACCACTGCTCGAAATTTACTGGCCTCTGGAGCT
GATGCTATTGAAAGGATTATGTCTTCATACAAAGAGGTCACTGAATTAGCAGGCTACACT
GCTCGAGTGTACAATATGTTTTGGGTCTTTGATGAAGTAAAAAGAGGCATTTATAAGAGA
ACTGCTGTCATTCAAGAATCTGAAAGCCATAGCAAGAATGGAGCTAAGGTAGAATTACCT
CTCAGTGACACATTGGCAATTAAAGGAAAAGTTATTGATGTGGATCACGGAATTATTTGT
GAAAATGTTCCCATAATTACACCAGCAGGAGAAGTGGTGGCTTCCAGGCTAAACTTCAAA
GTAGAAGAAGGAATGCATCTTTTGATAACTGGTCCCAATGGTTGTGGGAAAAGTTCTCTC
TTCAGAATTCTAAGTGGGCTCTGGCCTGTGTATGAAGGAGTCCTCTATAAACCACCTCCT
CAACATATGTTTTATATTCCACAAAGGCCATATATGTCTCTTGGAAGTCTTCGGGATCAA
GTCATTTACCCTGATTCAGTGGATGATATGCATGATAAAGGTTATACAGACCAAGATCTG
GAACGTATCCTACACAATGTCCATCTCTATCACATAGTTCAAAGAGAAGGAGGATGGGAT
GCTGTTATGGACTGGAAAGATGTCCTGTCAGGAGGGGAAAAGCAAAGAATGGGCATGGCT
CGTATGTTTTATCATAAACCAAAATATGCCTTGCTGGATGAATGTACCAGTGCTGTCAGC
ATTGATGTCGAAGGAAAGATATTTCAGGCTGCAAAAGGGGCTGGAATTTCCTTACTGTCT
ATAACACACAGACCTTCTCTTTGGAAATACCACACACATTTATTACAGTTTGATGGTGAA
GGAGGTTGGCGCTTTGAACAATTGGATACTGCTATCCGTTTGACATTGAGTGAAGAAAAA
CAAAAGCTAGAATCTCAGCTAGCTGGAATTCCCAAAATGCAGCAGAGACTCAATGAACTA
TGTAAAATTTTGGGAGAAGACTCAGTGCTGAAAACAATTAAAAATGAAGATGAGACATCT

ORF Protein

Cloned ORF protein sequence for pF1KB3282 Download

>KIBB3282  740 aa
MTHMLNAAADRVKWTRSSAAKRAACLVAAAYALKTLYPIIGKRLKQSGHGKKKAAAYPAA
ENTEILHCTETICEKPSPGVNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISRTFL
SIYVAGLDGKIVKSIVEKKPRTFIIKLIKWLMIAIPATFVNSAIRYLECKLALAFRTRLV
DHAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVMLTSY
TLIQTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGKLVAEEAHRKGYLRYVHSRII
ANVEEIAFYRGHKVEMKQLQKSYKALADQMNLILSKRLWYIMIEQFLMKYVWSSSGLIMV
AIPIITATGFADGEDGQKQVMVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYT
ARVYNMFWVFDEVKRGIYKRTAVIQESESHSKNGAKVELPLSDTLAIKGKVIDVDHGIIC
ENVPIITPAGEVVASRLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPP
QHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYTDQDLERILHNVHLYHIVQREGGWD
AVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLS
ITHRPSLWKYHTHLLQFDGEGGWRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNEL
CKILGEDSVLKTIKNEDETS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3282 Download

>pF1KB3282  5333 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACACATATG
CTAAATGCAGCAGCTGATCGAGTGAAATGGACCAGATCGAGTGCTGCTAAGAGGGCTGCC
TGCCTGGTGGCTGCGGCATATGCTCTGAAAACCCTCTATCCCATCATTGGCAAGCGTTTA
AAGCAATCTGGCCACGGGAAGAAAAAAGCAGCAGCTTACCCTGCTGCAGAGAACACAGAA
ATACTGCATTGCACCGAGACCATTTGTGAAAAACCTTCGCCTGGAGTGAATGCAGATTTC
TTCAAACAGCTACTAGAACTTCGGAAAATTTTGTTTCCAAAACTTGTGACCACTGAAACA
GGGTGGCTCTGCCTGCACTCAGTGGCTCTAATCTCAAGAACCTTTCTTTCTATCTATGTG
GCTGGTCTGGATGGAAAAATCGTGAAAAGCATTGTGGAAAAGAAGCCTCGGACTTTCATC
ATCAAATTAATCAAGTGGCTTATGATTGCCATCCCTGCTACCTTCGTCAACAGTGCAATA
AGGTACCTGGAATGCAAATTGGCTTTGGCCTTCAGAACTCGCCTAGTAGACCACGCCTAT
GAAACCTATTTTACAAATCAGACTTATTATAAAGTGATCAATATGGATGGGAGGCTGGCA
AACCCTGACCAATCTCTTACGGAGGATATTATGATGTTCTCCCAATCTGTGGCTCACTTG
TATTCCAATCTGACCAAACCTATTTTAGATGTAATGCTGACCTCCTATACACTCATTCAA
ACTGCTACATCCAGAGGAGCAAGCCCAATTGGGCCCACCCTACTAGCAGGACTTGTGGTG
TATGCCACTGCTAAAGTGTTAAAAGCCTGTTCTCCCAAATTTGGCAAACTGGTGGCAGAG
GAAGCACATAGAAAAGGCTATTTGCGGTATGTGCACTCGAGAATTATAGCCAATGTAGAA
GAAATTGCCTTTTACAGAGGACATAAGGTAGAAATGAAACAACTTCAGAAAAGTTACAAA
GCTTTAGCAGATCAGATGAACCTCATTTTATCCAAACGTTTGTGGTACATCATGATAGAA
CAGTTCCTGATGAAGTATGTTTGGAGCAGCAGTGGACTAATTATGGTGGCTATACCTATT
ATCACTGCAACTGGCTTTGCAGATGGTGAGGATGGCCAAAAGCAAGTTATGGTTAGTGAA
CGGACAGAAGCCTTTACCACTGCTCGAAATTTACTGGCCTCTGGAGCTGATGCTATTGAA
AGGATTATGTCTTCATACAAAGAGGTCACTGAATTAGCAGGCTACACTGCTCGAGTGTAC
AATATGTTTTGGGTCTTTGATGAAGTAAAAAGAGGCATTTATAAGAGAACTGCTGTCATT
CAAGAATCTGAAAGCCATAGCAAGAATGGAGCTAAGGTAGAATTACCTCTCAGTGACACA
TTGGCAATTAAAGGAAAAGTTATTGATGTGGATCACGGAATTATTTGTGAAAATGTTCCC
ATAATTACACCAGCAGGAGAAGTGGTGGCTTCCAGGCTAAACTTCAAAGTAGAAGAAGGA
ATGCATCTTTTGATAACTGGTCCCAATGGTTGTGGGAAAAGTTCTCTCTTCAGAATTCTA
AGTGGGCTCTGGCCTGTGTATGAAGGAGTCCTCTATAAACCACCTCCTCAACATATGTTT
TATATTCCACAAAGGCCATATATGTCTCTTGGAAGTCTTCGGGATCAAGTCATTTACCCT
GATTCAGTGGATGATATGCATGATAAAGGTTATACAGACCAAGATCTGGAACGTATCCTA
CACAATGTCCATCTCTATCACATAGTTCAAAGAGAAGGAGGATGGGATGCTGTTATGGAC
TGGAAAGATGTCCTGTCAGGAGGGGAAAAGCAAAGAATGGGCATGGCTCGTATGTTTTAT
CATAAACCAAAATATGCCTTGCTGGATGAATGTACCAGTGCTGTCAGCATTGATGTCGAA
GGAAAGATATTTCAGGCTGCAAAAGGGGCTGGAATTTCCTTACTGTCTATAACACACAGA
CCTTCTCTTTGGAAATACCACACACATTTATTACAGTTTGATGGTGAAGGAGGTTGGCGC
TTTGAACAATTGGATACTGCTATCCGTTTGACATTGAGTGAAGAAAAACAAAAGCTAGAA
TCTCAGCTAGCTGGAATTCCCAAAATGCAGCAGAGACTCAATGAACTATGTAAAATTTTG
GGAGAAGACTCAGTGCTGAAAACAATTAAAAATGAAGATGAGACATCTGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCC
TTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTC
TTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACC
AGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTT
CAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTT
CAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGC
TGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAA
GGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGAC
CTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGG
GAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGA
GCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACT
TGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAA
CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGC
GTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT