DTX1 ORF clone pF1KB3226

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Flexi ORF Clone pF1KB3226

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Clone info.

Species

human

Clone Name

pF1KB3226 Sequence (with vector) Restriction Map

Product ID

FXC01256

HaloTag Clone PID

FHC01256

Original Clone PID

ORK01256

ORF Sequence

DNA sequence (1860 bp)
Protein sequence (620 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384763]

Gene

KIBB3226

Symbol

DTX1

Alias : RNF140, hDx-1

Description

deltex 1, E3 ubiquitin ligase

Original Clone ID

fk00023

Features of the cloned ORF sequence

Description

Length: 1860 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 620 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9164.1 1.3e-104 100.0 DTX1 CCDS76408.1 6.7e-42 62.4 DTX4 CCDS44612.1 7.6e-42 64.9 DTX4 CCDS5587.1 2.9e-40 48.2 DTX2 CCDS43605.1 5.4e-25 45.8 DTX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004170 23 94 PF02825 WWE domain IPR004170 101 171 PF02825 WWE domain HMMSmart IPR018123 23 102 SM00678 WWE domain IPR018123 104 179 SM00678 WWE domain IPR001841 411 471 SM00184 Zinc finger ProfileScan IPR004170 14 94 PS50918 WWE domain IPR004170 95 171 PS50918 WWE domain IPR001841 411 472 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011536311 620 602582 100.0 100.0 NP_004407 620 602582 100.0 100.0 NP_055992 619 616110 64.9 95.3 XP_005250189 622 613141 48.2 95.6 NP_001096064 622 613141 48.2 95.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3226 Download

>KIBB3226  1860 bp
ATGTCACGGCCAGGCCACGGTGGGCTGATGCCTGTGAATGGTCTGGGCTTCCCACCGCAG
AACGTGGCCCGGGTGGTGGTGTGGGAGTGGCTGAATGAGCACAGCCGCTGGCGGCCCTAC
ACGGCCACCGTGTGCCACCACATTGAGAACGTGCTGAAGGAGGACGCTCGCGGTTCCGTG
GTCCTGGGGCAGGTGGACGCCCAGCTTGTGCCCTACATCATCGACCTGCAGTCCATGCAC
CAGTTTCGCCAGGACACAGGCACCATGCGGCCCGTGCGGCGCAACTTCTACGACCCGTCG
TCGGCGCCGGGCAAGGGCATCGTGTGGGAGTGGGAGAACGACGGCGGCGCATGGACGGCC
TACGATATGGACATCTGCATCACCATCCAGAACGCCTACGAGAAGCAGCACCCGTGGCTC
GACCTCTCATCGCTAGGCTTCTGCTACCTCATCTACTTCAACAGCATGTCGCAGATGAAC
CGCCAGACGCGCCGGCGCCGCCGCCTGCGCCGCCGCCTGGACCTCGCCTACCCGCTCACC
GTGGGCTCCATCCCTAAGTCGCAGTCGTGGCCCGTGGGCGCCAGCTCGGGCCAGCCCTGC
TCCTGCCAGCAGTGCCTGCTGGTCAACAGCACGCGCGCCGCCTCCAACGCCATCCTGGCC
TCGCAGCGCCGCAAGGCGCCCCCCGCGCCCCCGCTGCCGCCGCCGCCGCCACCTGGAGGG
CCTCCAGGCGCGCTTGCCGTGCGCCCCAGCGCCACCTTCACAGGCGCCGCGCTCTGGGCA
GCGCCCGCCGCCGGCCCCGCCGAGCCCGCGCCGCCTCCCGGGGCGCCCCCACGGAGCCCG
GGCGCCCCCGGCGGAGCGCGCACCCCGGGGCAGAACAACCTCAACCGGCCCGGGCCCCAG
CGCACCACCAGCGTGAGCGCGCGCGCCTCCATCCCGCCGGGGGTCCCCGCACTCCCGGTG
AAGAACTTGAATGGTACTGGGCCGGTCCATCCGGCCCTGGCAGGGATGACCGGGATACTG
CTGTGCGCGGCCGGGCTGCCCGTGTGCCTGACGCGGGCCCCCAAGCCCATCCTGCACCCG
CCGCCCGTGAGCAAGAGCGACGTGAAGCCCGTGCCTGGCGTGCCCGGGGTGTGCCGCAAG
ACCAAGAAGAAGCACCTTAAAAAGAGTAAGAATCCCGAGGATGTGGTTCGAAGATACATG
CAGAAGGTGAAAAACCCACCTGATGAGGACTGCACCATCTGCATGGAGCGACTGGTCACA
GCATCAGGCTACGAGGGCGTGCTTCGGCACAAGGGCGTGCGGCCTGAGCTCGTGGGCCGC
CTGGGCCGCTGTGGCCACATGTACCACCTGCTGTGCCTCGTGGCCATGTACTCCAATGGC
AACAAGGATGGCAGCCTGCAGTGCCCCACCTGCAAGGCCATCTACGGGGAGAAGACGGGT
ACGCAGCCGCCTGGGAAGATGGAGTTCCACCTCATCCCCCACTCGCTGCCCGGCTTCCCT
GATACCCAGACCATCCGCATCGTCTATGACATCCCCACAGGCATCCAGGGCCCTGAGCAC
CCCAACCCCGGGAAGAAGTTCACCGCAAGAGGATTCCCTCGCCACTGCTATCTACCCAAC
AACGAGAAAGGCCGGAAGGTGCTGCGGCTGCTCATCACGGCCTGGGAGAGAAGACTCATC
TTCACTATCGGCACGTCCAACACCACGGGCGAGTCGGACACCGTGGTGTGGAACGAGATC
CACCACAAGACCGAGTTTGGATCCAACCTCACGGGCCACGGCTACCCGGACGCTAGCTAC
CTAGACAACGTGCTGGCTGAGCTCACAGCCCAGGGCGTATCCGAGGCTGCAGCCAAGGCT

ORF Protein

Cloned ORF protein sequence for pF1KB3226 Download

>KIBB3226  620 aa
MSRPGHGGLMPVNGLGFPPQNVARVVVWEWLNEHSRWRPYTATVCHHIENVLKEDARGSV
VLGQVDAQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDGGAWTA
YDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTRRRRRLRRRLDLAYPLT
VGSIPKSQSWPVGASSGQPCSCQQCLLVNSTRAASNAILASQRRKAPPAPPLPPPPPPGG
PPGALAVRPSATFTGAALWAAPAAGPAEPAPPPGAPPRSPGAPGGARTPGQNNLNRPGPQ
RTTSVSARASIPPGVPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPKPILHP
PPVSKSDVKPVPGVPGVCRKTKKKHLKKSKNPEDVVRRYMQKVKNPPDEDCTICMERLVT
ASGYEGVLRHKGVRPELVGRLGRCGHMYHLLCLVAMYSNGNKDGSLQCPTCKAIYGEKTG
TQPPGKMEFHLIPHSLPGFPDTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRHCYLPN
NEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDASY
LDNVLAELTAQGVSEAAAKA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3226 Download

>pF1KB3226  4973 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCACGGCCA
GGCCACGGTGGGCTGATGCCTGTGAATGGTCTGGGCTTCCCACCGCAGAACGTGGCCCGG
GTGGTGGTGTGGGAGTGGCTGAATGAGCACAGCCGCTGGCGGCCCTACACGGCCACCGTG
TGCCACCACATTGAGAACGTGCTGAAGGAGGACGCTCGCGGTTCCGTGGTCCTGGGGCAG
GTGGACGCCCAGCTTGTGCCCTACATCATCGACCTGCAGTCCATGCACCAGTTTCGCCAG
GACACAGGCACCATGCGGCCCGTGCGGCGCAACTTCTACGACCCGTCGTCGGCGCCGGGC
AAGGGCATCGTGTGGGAGTGGGAGAACGACGGCGGCGCATGGACGGCCTACGATATGGAC
ATCTGCATCACCATCCAGAACGCCTACGAGAAGCAGCACCCGTGGCTCGACCTCTCATCG
CTAGGCTTCTGCTACCTCATCTACTTCAACAGCATGTCGCAGATGAACCGCCAGACGCGC
CGGCGCCGCCGCCTGCGCCGCCGCCTGGACCTCGCCTACCCGCTCACCGTGGGCTCCATC
CCTAAGTCGCAGTCGTGGCCCGTGGGCGCCAGCTCGGGCCAGCCCTGCTCCTGCCAGCAG
TGCCTGCTGGTCAACAGCACGCGCGCCGCCTCCAACGCCATCCTGGCCTCGCAGCGCCGC
AAGGCGCCCCCCGCGCCCCCGCTGCCGCCGCCGCCGCCACCTGGAGGGCCTCCAGGCGCG
CTTGCCGTGCGCCCCAGCGCCACCTTCACAGGCGCCGCGCTCTGGGCAGCGCCCGCCGCC
GGCCCCGCCGAGCCCGCGCCGCCTCCCGGGGCGCCCCCACGGAGCCCGGGCGCCCCCGGC
GGAGCGCGCACCCCGGGGCAGAACAACCTCAACCGGCCCGGGCCCCAGCGCACCACCAGC
GTGAGCGCGCGCGCCTCCATCCCGCCGGGGGTCCCCGCACTCCCGGTGAAGAACTTGAAT
GGTACTGGGCCGGTCCATCCGGCCCTGGCAGGGATGACCGGGATACTGCTGTGCGCGGCC
GGGCTGCCCGTGTGCCTGACGCGGGCCCCCAAGCCCATCCTGCACCCGCCGCCCGTGAGC
AAGAGCGACGTGAAGCCCGTGCCTGGCGTGCCCGGGGTGTGCCGCAAGACCAAGAAGAAG
CACCTTAAAAAGAGTAAGAATCCCGAGGATGTGGTTCGAAGATACATGCAGAAGGTGAAA
AACCCACCTGATGAGGACTGCACCATCTGCATGGAGCGACTGGTCACAGCATCAGGCTAC
GAGGGCGTGCTTCGGCACAAGGGCGTGCGGCCTGAGCTCGTGGGCCGCCTGGGCCGCTGT
GGCCACATGTACCACCTGCTGTGCCTCGTGGCCATGTACTCCAATGGCAACAAGGATGGC
AGCCTGCAGTGCCCCACCTGCAAGGCCATCTACGGGGAGAAGACGGGTACGCAGCCGCCT
GGGAAGATGGAGTTCCACCTCATCCCCCACTCGCTGCCCGGCTTCCCTGATACCCAGACC
ATCCGCATCGTCTATGACATCCCCACAGGCATCCAGGGCCCTGAGCACCCCAACCCCGGG
AAGAAGTTCACCGCAAGAGGATTCCCTCGCCACTGCTATCTACCCAACAACGAGAAAGGC
CGGAAGGTGCTGCGGCTGCTCATCACGGCCTGGGAGAGAAGACTCATCTTCACTATCGGC
ACGTCCAACACCACGGGCGAGTCGGACACCGTGGTGTGGAACGAGATCCACCACAAGACC
GAGTTTGGATCCAACCTCACGGGCCACGGCTACCCGGACGCTAGCTACCTAGACAACGTG
CTGGCTGAGCTCACAGCCCAGGGCGTATCCGAGGCTGCAGCCAAGGCTGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCC
TTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTC
TTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACC
AGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTT
CAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTT
CAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGC
TGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAA
GGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGAC
CTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGG
GAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGA
GCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACT
TGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAA
CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGC
GTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT