CELF1 ORF clone pF1KB0039

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB0039

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Clone info.

Species

human

Clone Name

pF1KB0039 Sequence (with vector) Restriction Map

Product ID

FXC01706

HaloTag Clone PID

FHC01706

Original Clone PID

ORK01706

ORF Sequence

DNA sequence (1536 bp)
Protein sequence (512 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384673]

Gene

KIBB0039

Symbol

CELF1

Alias : BRUNOL2, CUG-BP, CUGBP, CUGBP1, EDEN-BP, NAB50, NAPOR, hNab50

Description

CUGBP, Elav-like family member 1, transcript variant 4

Original Clone ID

fk00577

Features of the cloned ORF sequence

Description

Length: 1536 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 512 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS53623.1 2.5e-126 100.0 CELF1 CCDS81565.1 2.2e-125 99.6 CELF1 CCDS53622.1 3.6e-119 100.0 CELF1 CCDS31482.1 1.1e-118 99.8 CELF1 CCDS7938.1 5.2e-117 99.0 CELF1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 46 111 PF00076 RNA recognition motif domain IPR000504 136 201 PF00076 RNA recognition motif domain IPR000504 429 498 PF00076 RNA recognition motif domain HMMSmart IPR000504 44 122 SM00360 RNA recognition motif domain IPR000504 135 210 SM00360 RNA recognition motif domain IPR000504 428 501 SM00360 RNA recognition motif domain ProfileScan IPR000504 43 126 PS50102 RNA recognition motif domain IPR000504 134 214 PS50102 RNA recognition motif domain IPR000504 427 505 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001166110 512 601074 100.0 100.0 XP_016872595 513 601074 99.8 100.0 XP_016872596 513 601074 99.8 100.0 XP_016872594 513 601074 99.8 100.0 XP_011518152 513 601074 99.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0039 Download

>KIBB0039  1536 bp
ATGGCTGCGTTTAAGTTGGATTTCCTTCCAGAAATGATGGTGGATCATTGCTCTTTGAAT
TCCAGTCCCGTCTCAAAGAAAATGAACGGCACCCTGGACCACCCAGACCAACCAGATCTT
GATGCTATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAAAGGACTTGCGG
GAACTCTTCGAACAGTATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATAGGAGCCAA
AACCCGCCTCAGAGCAAAGGGTGCTGTTTTGTTACATTTTACACCCGTAAAGCTGCATTA
GAAGCTCAGAATGCTCTTCACAACATGAAAGTCCTCCCAGGGATGCATCACCCTATACAG
ATGAAACCTGCTGACAGTGAGAAGAACAATGTGGAAGACAGGAAGCTGTTTATTGGTATG
ATTTCCAAGAAGTGCACTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTGGACAGATT
GAAGAATGCCGGATATTGCGGGGACCTGATGGCCTGAGCCGAGGTTGTGCATTTGTGACT
TTTACAACAAGAGCCATGGCACAGACGGCTATCAAGGCAATGCACCAAGCACAGACCATG
GAGGGTTGCTCATCACCCATGGTGGTAAAATTTGCTGATACACAGAAGGACAAAGAACAG
AAGAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCTGTGTGG
GGAAACCTTGCTGGTCTAAATACTCTTGGACCCCAGTATTTAGCACTTTATTTGCAGCTC
CTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGA
GGGTTGAATGCAATGCAGTTACAGAATTTGGCTGCACTAGCTGCTGCAGCTAGTGCAGCT
CAGAACACACCAAGTGGTACCAATGCTCTCACTACATCCAGCAGTCCCCTCAGCGTGCTC
ACTAGTTCAGGGTCCTCACCTAGCTCTAGCAGCAGTAATTCTGTCAACCCCATAGCCTCA
CTTGGAGCCCTGCAGACATTAGCTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGCA
GGAATGGCTGCTTTAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGC
ACCATGGAGGCCCTCACTCAGGCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCGCTC
CCCACTCTGTACAACCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGCTGGAAGCCAG
AAGGAAGGTCCAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCCAGGAGTTTGGTGAT
CAGGACCTGCTGCAGATGTTTATGCCCTTTGGGAATGTCGTGTCTGCCAAGGTTTTCATA
GACAAGCAGACAAACCTGAGCAAGTGTTTTGGTTTTGTAAGTTACGACAATCCTGTTTCG
GCCCAAGCTGCCATCCAGTCCATGAACGGCTTTCAGATTGGCATGAAGCGGCTTAAAGTG
CAGCTCAAACGTTCGAAGAATGACAGCAAGCCCTAC

ORF Protein

Cloned ORF protein sequence for pF1KB0039 Download

>KIBB0039  512 aa
MAAFKLDFLPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLR
ELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQ
MKPADSEKNNVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVT
FTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVW
GNLAGLNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAA
QNTPSGTNALTTSSSPLSVLTSSGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLA
GMAALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQ
KEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVS
AQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0039 Download

>pF1KB0039  4649 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTGCGTTT
AAGTTGGATTTCCTTCCAGAAATGATGGTGGATCATTGCTCTTTGAATTCCAGTCCCGTC
TCAAAGAAAATGAACGGCACCCTGGACCACCCAGACCAACCAGATCTTGATGCTATCAAG
ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAAAGGACTTGCGGGAACTCTTCGAA
CAGTATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATAGGAGCCAAAACCCGCCTCAG
AGCAAAGGGTGCTGTTTTGTTACATTTTACACCCGTAAAGCTGCATTAGAAGCTCAGAAT
GCTCTTCACAACATGAAAGTCCTCCCAGGGATGCATCACCCTATACAGATGAAACCTGCT
GACAGTGAGAAGAACAATGTGGAAGACAGGAAGCTGTTTATTGGTATGATTTCCAAGAAG
TGCACTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTGGACAGATTGAAGAATGCCGG
ATATTGCGGGGACCTGATGGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACAACAAGA
GCCATGGCACAGACGGCTATCAAGGCAATGCACCAAGCACAGACCATGGAGGGTTGCTCA
TCACCCATGGTGGTAAAATTTGCTGATACACAGAAGGACAAAGAACAGAAGAGAATGGCC
CAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGAAACCTTGCT
GGTCTAAATACTCTTGGACCCCAGTATTTAGCACTTTATTTGCAGCTCCTTCAGCAGACT
GCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATGCA
ATGCAGTTACAGAATTTGGCTGCACTAGCTGCTGCAGCTAGTGCAGCTCAGAACACACCA
AGTGGTACCAATGCTCTCACTACATCCAGCAGTCCCCTCAGCGTGCTCACTAGTTCAGGG
TCCTCACCTAGCTCTAGCAGCAGTAATTCTGTCAACCCCATAGCCTCACTTGGAGCCCTG
CAGACATTAGCTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGCAGGAATGGCTGCT
TTAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGGAGGCC
CTCACTCAGGCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCGCTCCCCACTCTGTAC
AACCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGCTGGAAGCCAGAAGGAAGGTCCA
GAGGGAGCCAACCTGTTCATCTACCACCTGCCCCAGGAGTTTGGTGATCAGGACCTGCTG
CAGATGTTTATGCCCTTTGGGAATGTCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACA
AACCTGAGCAAGTGTTTTGGTTTTGTAAGTTACGACAATCCTGTTTCGGCCCAAGCTGCC
ATCCAGTCCATGAACGGCTTTCAGATTGGCATGAAGCGGCTTAAAGTGCAGCTCAAACGT
TCGAAGAATGACAGCAAGCCCTACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGT
GAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTG
AGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGT
AATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCA
AGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATAC
TGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTAC
ATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCT
TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGG
GGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACA
GCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGT
AAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTA
TCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTC
GTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGC
CTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAA
CCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT