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SpecieshumanProduct IDFXC25547Cloning SiteSgfI-PmeIGenBank AccessionGeneKIEE3269SymbolTRAF7
Alias : CAFDADD, RFWD1, RNF119DescriptionTNF receptor associated factor 7Original Clone IDcp93269
Length: 2010 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 670 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS10461.1 1.2e-159 100.0 TRAF7 CCDS34078.1 2.3e-12 28.7 FBXW7 CCDS3778.1 2.4e-12 28.7 FBXW7 CCDS3777.1 2.6e-12 28.7 FBXW7
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR020472 411 425 PR00320 G-protein beta WD-40 repeat IPR020472 452 466 PR00320 G-protein beta WD-40 repeat IPR020472 656 670 PR00320 G-protein beta WD-40 repeat HMMPfam NULL 222 278 PF02176 NULL IPR019781 387 424 PF00400 WD40 repeat IPR019781 430 465 PF00400 WD40 repeat IPR019781 472 504 PF00400 WD40 repeat IPR019781 511 545 PF00400 WD40 repeat IPR019781 550 585 PF00400 WD40 repeat IPR019781 590 629 PF00400 WD40 repeat IPR019781 635 668 PF00400 WD40 repeat HMMSmart IPR001841 131 164 SM00184 Zinc finger IPR001680 385 424 SM00320 WD40 repeat IPR001680 428 465 SM00320 WD40 repeat IPR001680 468 504 SM00320 WD40 repeat IPR001680 509 545 SM00320 WD40 repeat IPR001680 548 585 SM00320 WD40 repeat IPR001680 588 629 SM00320 WD40 repeat IPR001680 632 669 SM00320 WD40 repeat ProfileScan IPR001841 131 165 PS50089 Zinc finger IPR001293 222 292 PS50145 Zinc finger IPR019782 392 424 PS50082 WD40 repeat 2 IPR017986 392 670 PS50294 WD40-repeat-containing domain IPR019782 435 474 PS50082 WD40 repeat 2 IPR019782 555 594 PS50082 WD40 repeat 2 IPR019782 595 638 PS50082 WD40 repeat 2 IPR019782 639 670 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115647 670 606692 100.0 100.0 XP_005255684 668 606692 99.7 100.0 XP_011521002 641 606692 100.0 95.7 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KE3269 Download>KIEE3269 2010 bp ATGAGCTCAGGCAAGAGTGCCCGCTACAACCGCTTCTCCGGGGGGCCCAGCAATCTTCCC ACCCCAGACGTCACCACAGGGACCAGAATGGAAACGACCTTCGGACCCGCCTTTTCAGCC GTCACCACCATCACAAAAGCTGACGGGACCAGCACCTACAAGCAGCACTGCAGGACACCC TCCTCCTCCAGCACCCTTGCCTACTCCCCGCGGGACGAGGAGGACAGCATGCCCCCCATC AGCACTCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGC ATGTCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAGGAGGAGCCGGAGCCACTGGTG TTTGCGGAGCAGCCCTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGTCTTCAAAGAC CCCGTGATCACCACGTGTGGGCACACGTTCTGTAGGAGATGCGCCTTGAAGTCAGAGAAG TGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAG ATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGCGGGCAGCGGGAAGCCC CCCATCTTTGAGGTGGACCCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAG GACCACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCCCC CCGCTGCTCAGGATGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCC CACTCCAAGTACGGGTGCACGTTCATCGGGAACCAGGACACTTACGAGACCCACCTGGAG ACTTGCCGCTTCGAGGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCTTCCACGAG ATGCACGTGGCTCTGGCCCAGAAGGACCAGGAGATCGCCTTCCTGCGCTCCATGCTGGGA AAGCTCTCGGAGAAGATCGACCAGCTAGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCTG GACGAAAACCAGAGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGCGGGACGCATCCATG TTAAATGACGAGCTGTCCCACATCAACGCGCGGCTGAACATGGGCATCCTAGGCTCCTAC GACCCTCAGCAGATCTTCAAGTGCAAAGGGACCTTTGTGGGCCACCAGGGCCCTGTGTGG TGTCTCTGCGTCTACTCCATGGGTGACCTGCTCTTCAGTGGCTCCTCTGACAAGACCATC AAGGTGTGGGACACATGTACCACCTACAAGTGTCAGAAGACACTGGAGGGCCATGATGGC ATCGTGCTGGCTCTCTGCATCCAGGGGTGCAAACTCTACAGCGGCTCTGCAGACTGCACC ATCATTGTGTGGGACATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAAC CCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATC AAGGTCTGGGACATCGTGGGCACTGAGCTGAAGTTGAAGAAGGAGCTCACAGGCCTCAAC CACTGGGTGCGGGCCCTGGTGGCTGCCCAGAGCTACCTGTACAGCGGCTCCTACCAGACA ATCAAGATCTGGGACATCCGAACCCTTGACTGCATCCACGTCCTGCAGACGTCTGGTGGC AGCGTCTACTCCATTGCTGTGACAAATCACCACATTGTCTGTGGCACCTACGAGAACCTC ATCCACGTGTGGGACATTGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGC ACCGTGTATGCCCTGGCGGTCATCTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATCC TACGACCGGTCCCTCAGGGTCTGGAGTATGGACAACATGATCTGCACGCAGACCCTGCTG CGTCACCAGGGCAGTGTCACCGCGCTGGCTGTGTCCCGGGGCCGACTCTTCTCAGGGGCT GTGGATAGCACTGTGAAGGTTTGGACTTGC
Cloned ORF protein sequence for pF1KE3269 Download>KIEE3269 670 aa MSSGKSARYNRFSGGPSNLPTPDVTTGTRMETTFGPAFSAVTTITKADGTSTYKQHCRTP SSSSTLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLV FAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNVKLTVVVNNIAVAEQ IGELFIHCRHGCRVAGSGKPPIFEVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCP PLLRMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHE MHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASM LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTI KVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDN PVCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA VDSTVKVWTC
Nucleotide Sequence (with vector) for pF1KE3269 Download>pF1KE3269 5123 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCTCAGGC AAGAGTGCCCGCTACAACCGCTTCTCCGGGGGGCCCAGCAATCTTCCCACCCCAGACGTC ACCACAGGGACCAGAATGGAAACGACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATC ACAAAAGCTGACGGGACCAGCACCTACAAGCAGCACTGCAGGACACCCTCCTCCTCCAGC ACCCTTGCCTACTCCCCGCGGGACGAGGAGGACAGCATGCCCCCCATCAGCACTCCCCGC CGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCATGTCTCTGCGC TCCACATTCTCACTGCCCGAGGAGGAGGAGGAGCCGGAGCCACTGGTGTTTGCGGAGCAG CCCTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCACC ACGTGTGGGCACACGTTCTGTAGGAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTGGAC AACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTC TTCATCCACTGCCGGCACGGCTGCCGGGTAGCGGGCAGCGGGAAGCCCCCCATCTTTGAG GTGGACCCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGC AGCTGTGACTACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCCCCCCGCTGCTCAGG ATGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAAGTAC GGGTGCACGTTCATCGGGAACCAGGACACTTACGAGACCCACCTGGAGACTTGCCGCTTC GAGGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCT CTGGCCCAGAAGGACCAGGAGATCGCCTTCCTGCGCTCCATGCTGGGAAAGCTCTCGGAG AAGATCGACCAGCTAGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCTGGACGAAAACCAG AGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGCGGGACGCATCCATGTTAAATGACGAG CTGTCCCACATCAACGCGCGGCTGAACATGGGCATCCTAGGCTCCTACGACCCTCAGCAG ATCTTCAAGTGCAAAGGGACCTTTGTGGGCCACCAGGGCCCTGTGTGGTGTCTCTGCGTC TACTCCATGGGTGACCTGCTCTTCAGTGGCTCCTCTGACAAGACCATCAAGGTGTGGGAC ACATGTACCACCTACAAGTGTCAGAAGACACTGGAGGGCCATGATGGCATCGTGCTGGCT CTCTGCATCCAGGGGTGCAAACTCTACAGCGGCTCTGCAGACTGCACCATCATTGTGTGG GACATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAACCCGGTGTGCACG CTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATCAAGGTCTGGGAC ATCGTGGGCACTGAGCTGAAGTTGAAGAAGGAGCTCACAGGCCTCAACCACTGGGTGCGG GCCCTGGTGGCTGCCCAGAGCTACCTGTACAGCGGCTCCTACCAGACAATCAAGATCTGG GACATCCGAACCCTTGACTGCATCCACGTCCTGCAGACGTCTGGTGGCAGCGTCTACTCC ATTGCTGTGACAAATCACCACATTGTCTGTGGCACCTACGAGAACCTCATCCACGTGTGG GACATTGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCACCGTGTATGCC CTGGCGGTCATCTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATCCTACGACCGGTCC CTCAGGGTCTGGAGTATGGACAACATGATCTGCACGCAGACCCTGCTGCGTCACCAGGGC AGTGTCACCGCGCTGGCTGTGTCCCGGGGCCGACTCTTCTCAGGGGCTGTGGATAGCACT GTGAAGGTTTGGACTTGCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA CATTCAAATATGTATCCGCTCAT
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