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SpecieshumanProduct IDFXC15377Cloning SiteSgfI-PmeIGenBank AccessionGeneKIEE2564SymbolLOXL3
Alias : LOXLDescriptionlysyl oxidase-like 3, transcript variant 2Original Clone IDoc01566
Length: 1824 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 608 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS74527.1 0 100.0 LOXL3 CCDS1953.1 2.1e-202 82.4 LOXL3 CCDS34864.1 3.7e-135 55.3 LOXL2 CCDS7473.1 2.9e-131 54.0 LOXL4 CCDS44492.1 9.1e-52 41.3 DMBT1
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001190 162 178 PR00258 Speract/scavenger receptor IPR001190 181 192 PR00258 Speract/scavenger receptor IPR001190 196 206 PR00258 Speract/scavenger receptor IPR001190 227 241 PR00258 Speract/scavenger receptor IPR001190 250 262 PR00258 Speract/scavenger receptor IPR001695 393 417 PR00074 Lysyl oxidase IPR001695 438 459 PR00074 Lysyl oxidase IPR001695 460 480 PR00074 Lysyl oxidase IPR001695 508 530 PR00074 Lysyl oxidase IPR001695 531 550 PR00074 Lysyl oxidase IPR001695 551 568 PR00074 Lysyl oxidase IPR001695 569 587 PR00074 Lysyl oxidase HMMPfam IPR001190 52 145 PF00530 Speract/scavenger receptor IPR001190 166 262 PF00530 Speract/scavenger receptor IPR001190 276 380 PF00530 Speract/scavenger receptor IPR001695 384 587 PF01186 Lysyl oxidase HMMSmart IPR017448 44 145 SM00202 Speract/scavenger receptor-related IPR017448 162 262 SM00202 Speract/scavenger receptor-related IPR017448 272 380 SM00202 Speract/scavenger receptor-related ProfileScan IPR001190 44 145 PS50287 Speract/scavenger receptor IPR001190 162 262 PS50287 Speract/scavenger receptor IPR001190 272 380 PS50287 Speract/scavenger receptor
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001276093 608 607163 100.0 100.0 XP_011531436 753 607163 82.4 93.3 NP_115992 753 607163 82.4 93.3 NP_002309 774 606663 55.3 91.6 XP_005270273 757 607318 53.8 91.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KE2564 Download>KIEE2564 1824 bp ATGCGACCTGTCAGTGTCTGGCAGTGGAGCCCCTGGGGGCTGCTGCTGTGCCTGCTGTGC AGTTCGTGCTTGGGGTCTCCGTCCCCTTCCACGGGCCCTGAGAAGAAGGCCGGGAGCCAG GGGCTTCGGTTCCGGCTGGCTGGCTTCCCCAGGAAGCCCTACGAGGGCCGCGTGGAGATA CAGCGAGCTGGTGAATGGGGCACCATCTGCGATGATGACTTCACGCTGCAGGCTGCCCAC ATCCTCTGCCGGGAGCTGGGCTTCACAGAGGCCACAGGCTGGACCCACAGTGCCAAATAT GGCCCTGGAACAGGCCGCATCTGGCTGGACAACTTGAGCTGCAGTGGGACCGAGCAGAGT GTGACTGAATGTGCCTCCCGGGGCTGGGGGAACAGTGACTGTACGCACGATGAGGATGCT GGGGTCATCTGCAAAGACCAGCGCCTCCCTGGCTTCTCGGACTCCAATGTCATTGAGGCC CGTGTCCGTCTAAAGGGCGGCGCCCACCCTGGAGAGGGCCGGGTAGAAGTCCTGAAGGCC AGCACATGGGGCACAGTCTGTGACCGCAAGTGGGACCTGCATGCAGCCAGCGTGGTGTGT CGGGAGCTGGGCTTCGGGAGTGCTCGAGAAGCTCTGAGTGGCGCTCGCATGGGGCAGGGC ATGGGTGCTATCCACCTGAGTGAAGTTCGCTGCTCTGGACAGGAGCTCTCCCTCTGGAAG TGCCCCCACAAGAACATCACAGCTGAGGATTGTTCACATAGCCAGGATGCCGGGGTCCGG TGCAACCTACCTTACACTGGGGCAGAGACCAGGATCCGACTCAGTGGGGGCCGCAGCCAA CATGAGGGGCGAGTCGAGGTGCAAATAGGGGGACCTGGGCCCCTTCGCTGGGGCCTCATC TGTGGGGATGACTGGGGGACCCTGGAGGCCATGGTGGCCTGTAGGCAACTGGGTCTGGGC TACGCCAACCACGGCCTGCAGGAGACCTGGTACTGGGACTCTGGGAATATAACAGAGGTG GTGATGAGTGGAGTGCGCTGCACAGGGACTGAGCTGTCCCTGGATCAGTGTGCCCATCAT GGCACCCACATCACCTGCAAGAGGACAGGGACCCGCTTCACTGCTGGAGTCATCTGTTCT GAGACTGCATCAGATCTGTTGCTGCACTCAGCACTGGTGCAGGAGACCGCCTACATCGAA GACCGGCCCCTGCATATGTTGTACTGTGCTGCGGAAGAGAACTGCCTGGCCAGCTCAGCC CGCTCAGCCAACTGGCCCTATGGTCACCGGCGTCTGCTCCGATTCTCCTCCCAGATCCAC AACCTGGGACGAGCTGACTTCAGGCCCAAGGCTGGGCGCCACTCCTGGGTGTGGCACGAG TGCCATGGGCATTACCACAGCATGGACATCTTCACTCACTATGATATCCTCACCCCAAAT GGCACCAAGGTGGCTGAGGGCCACAAAGCTAGTTTCTGTCTCGAAGACACTGAGTGTCAG GAGGATGTCTCCAAGCGGTATGAGTGTGCCAACTTTGGAGAGCAAGGCATCACTGTGGGT TGCTGGGATCTCTACCGGCATGACATTGACTGTCAGTGGATTGACATCACGGATGTGAAG CCAGGAAACTACATTCTCCAGGTTGTCATCAACCCAAACTTTGAAGTAGCAGAGAGTGAC TTTACCAACAATGCAATGAAATGTAACTGCAAATATGATGGACATAGAATCTGGGTGCAC AACTGCCACATTGGTGATGCCTTCAGTGAAGAGGCCAACAGGAGGTTTGAACGCTACCCT GGCCAGACCAGCAACCAGATTATC
Cloned ORF protein sequence for pF1KE2564 Download>KIEE2564 608 aa MRPVSVWQWSPWGLLLCLLCSSCLGSPSPSTGPEKKAGSQGLRFRLAGFPRKPYEGRVEI QRAGEWGTICDDDFTLQAAHILCRELGFTEATGWTHSAKYGPGTGRIWLDNLSCSGTEQS VTECASRGWGNSDCTHDEDAGVICKDQRLPGFSDSNVIEARVRLKGGAHPGEGRVEVLKA STWGTVCDRKWDLHAASVVCRELGFGSAREALSGARMGQGMGAIHLSEVRCSGQELSLWK CPHKNITAEDCSHSQDAGVRCNLPYTGAETRIRLSGGRSQHEGRVEVQIGGPGPLRWGLI CGDDWGTLEAMVACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHH GTHITCKRTGTRFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSA RSANWPYGHRRLLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPN GTKVAEGHKASFCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVK PGNYILQVVINPNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYP GQTSNQII
Nucleotide Sequence (with vector) for pF1KE2564 Download>pF1KE2564 4937 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCGACCTGTC AGTGTCTGGCAGTGGAGCCCCTGGGGGCTGCTGCTGTGCCTGCTGTGCAGTTCGTGCTTG GGGTCTCCGTCCCCTTCCACGGGCCCTGAGAAGAAGGCCGGGAGCCAGGGGCTTCGGTTC CGGCTGGCTGGCTTCCCCAGGAAGCCCTACGAGGGCCGCGTGGAGATACAGCGAGCTGGT GAATGGGGCACCATCTGCGATGATGACTTCACGCTGCAGGCTGCCCACATCCTCTGCCGG GAGCTGGGCTTCACAGAGGCCACAGGCTGGACCCACAGTGCCAAATATGGCCCTGGAACA GGCCGCATCTGGCTGGACAACTTGAGCTGCAGTGGGACCGAGCAGAGTGTGACTGAATGT GCCTCCCGGGGCTGGGGGAACAGTGACTGTACGCACGATGAGGATGCTGGGGTCATCTGC AAAGACCAGCGCCTCCCTGGCTTCTCGGACTCCAATGTCATTGAGGCCCGTGTCCGTCTA AAGGGCGGCGCCCACCCTGGAGAGGGCCGGGTAGAAGTCCTGAAGGCCAGCACATGGGGC ACAGTCTGTGACCGCAAGTGGGACCTGCATGCAGCCAGCGTGGTGTGTCGGGAGCTGGGC TTCGGGAGTGCTCGAGAAGCTCTGAGTGGCGCTCGCATGGGGCAGGGCATGGGTGCTATC CACCTGAGTGAAGTTCGCTGCTCTGGACAGGAGCTCTCCCTCTGGAAGTGCCCCCACAAG AACATCACAGCTGAGGATTGTTCACATAGCCAGGATGCCGGGGTCCGGTGCAACCTACCT TACACTGGGGCAGAGACCAGGATCCGACTCAGTGGGGGCCGCAGCCAACATGAGGGGCGA GTCGAGGTGCAAATAGGGGGACCTGGGCCCCTTCGCTGGGGCCTCATCTGTGGGGATGAC TGGGGGACCCTGGAGGCCATGGTGGCCTGTAGGCAACTGGGTCTGGGCTACGCCAACCAC GGCCTGCAGGAGACCTGGTACTGGGACTCTGGGAATATAACAGAGGTGGTGATGAGTGGA GTGCGCTGCACAGGGACTGAGCTGTCCCTGGATCAGTGTGCCCATCATGGCACCCACATC ACCTGCAAGAGGACAGGGACCCGCTTCACTGCTGGAGTCATCTGTTCTGAGACTGCATCA GATCTGTTGCTGCACTCAGCACTGGTGCAGGAGACCGCCTACATCGAAGACCGGCCCCTG CATATGTTGTACTGTGCTGCGGAAGAGAACTGCCTGGCCAGCTCAGCCCGCTCAGCCAAC TGGCCCTATGGTCACCGGCGTCTGCTCCGATTCTCCTCCCAGATCCACAACCTGGGACGA GCTGACTTCAGGCCCAAGGCTGGGCGCCACTCCTGGGTGTGGCACGAGTGCCATGGGCAT TACCACAGCATGGACATCTTCACTCACTATGATATCCTCACCCCAAATGGCACCAAGGTG GCTGAGGGCCACAAAGCTAGTTTCTGTCTCGAAGACACTGAGTGTCAGGAGGATGTCTCC AAGCGGTATGAGTGTGCCAACTTTGGAGAGCAAGGCATCACTGTGGGTTGCTGGGATCTC TACCGGCATGACATTGACTGTCAGTGGATTGACATCACGGATGTGAAGCCAGGAAACTAC ATTCTCCAGGTTGTCATCAACCCAAACTTTGAAGTAGCAGAGAGTGACTTTACCAACAAT GCAATGAAATGTAACTGCAAATATGATGGACATAGAATCTGGGTGCACAACTGCCACATT GGTGATGCCTTCAGTGAAGAGGCCAACAGGAGGTTTGAACGCTACCCTGGCCAGACCAGC AACCAGATTATCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA AATATGTATCCGCTCAT
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