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SpecieshumanProduct IDFXC11652Cloning SiteSgfI-PmeIGeneKIBB9954SymbolGPSM2
Alias : CMCS, DFNB82, LGN, PINSDescriptionG-protein signaling modulator 2Original Clone IDcs01654
Length: 2031 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 677 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS792.2 0 100.0 GPSM2 CCDS48055.1 7.8e-136 59.7 GPSM1 CCDS6996.2 8.5e-101 74.5 GPSM1 CCDS48056.1 2.1e-23 53.4 GPSM1 CCDS46678.1 1.1e-20 33.7 TTC28
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001440 95 125 PF00515 Tetratricopeptide TPR-1 IPR001440 236 265 PF00515 Tetratricopeptide TPR-1 IPR001440 275 305 PF00515 Tetratricopeptide TPR-1 IPR011717 316 334 PF07721 Tetratricopeptide TPR-4 IPR003109 482 502 PF02188 GoLoco motif IPR003109 537 559 PF02188 GoLoco motif IPR003109 587 608 PF02188 GoLoco motif IPR003109 621 643 PF02188 GoLoco motif HMMSmart IPR019734 55 88 SM00028 Tetratricopeptide repeat IPR019734 95 128 SM00028 Tetratricopeptide repeat IPR019734 135 181 SM00028 Tetratricopeptide repeat IPR019734 195 228 SM00028 Tetratricopeptide repeat IPR019734 235 268 SM00028 Tetratricopeptide repeat IPR019734 275 308 SM00028 Tetratricopeptide repeat IPR019734 315 348 SM00028 Tetratricopeptide repeat IPR003109 482 504 SM00390 GoLoco motif IPR003109 537 559 SM00390 GoLoco motif IPR003109 587 609 SM00390 GoLoco motif IPR003109 621 643 SM00390 GoLoco motif ProfileScan IPR019734 55 88 PS50005 Tetratricopeptide repeat IPR013026 55 128 PS50293 Tetratricopeptide repeat-containing IPR019734 95 128 PS50005 Tetratricopeptide repeat IPR019734 195 228 PS50005 Tetratricopeptide repeat IPR013026 195 348 PS50293 Tetratricopeptide repeat-containing IPR019734 235 268 PS50005 Tetratricopeptide repeat IPR019734 275 308 PS50005 Tetratricopeptide repeat IPR019734 315 348 PS50005 Tetratricopeptide repeat IPR003109 482 504 PS50877 GoLoco motif IPR003109 537 559 PS50877 GoLoco motif IPR003109 587 609 PS50877 GoLoco motif IPR003109 621 643 PS50877 GoLoco motif
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016856586 684 604213,609245 100.0 100.0 XP_016856587 684 604213,609245 100.0 100.0 NP_001307967 684 604213,609245 100.0 100.0 XP_011539603 684 604213,609245 100.0 100.0 NP_001307968 684 604213,609245 100.0 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9954 Download>KIBB9954 2031 bp ATGAGAGAAGACCATTCTTTTCATGTTCGTTACAGAATGGAAGCTTCTTGCCTAGAGCTG GCCTTGGAAGGGGAACGTCTATGTAAATCAGGAGACTGCCGCGCTGGCGTGTCATTCTTT GAAGCTGCAGTTCAAGTTGGAACTGAAGACCTAAAAACACTTAGCGCTATTTACAGCCAG TTGGGCAATGCTTATTTCTATTTGCATGATTATGCCAAAGCATTAGAATATCACCATCAT GATTTAACCCTTGCAAGGACTATTGGAGACCAGCTGGGGGAAGCGAAAGCTAGTGGTAAT CTGGGAAACACCTTAAAAGTTCTTGGGAATTTTGACGAAGCCATAGTTTGTTGTCAGCGA CACCTAGATATTTCCAGAGAGCTTAATGACAAGGTGGGAGAAGCAAGAGCACTTTACAAT CTTGGGAATGTGTATCATGCCAAAGGGAAAAGTTTTGGTTGCCCTGGTCCCCAGGATGTA GGAGAATTTCCAGAAGAAGTGAGAGATGCTCTGCAGGCAGCCGTGGATTTTTATGAGGAA AACCTATCATTAGTGACTGCTTTGGGTGACCGAGCGGCACAAGGACGTGCCTTTGGAAAT CTTGGAAACACACATTACCTCCTTGGCAACTTCAGGGATGCAGTTATAGCTCATGAGCAG CGTCTCCTTATTGCAAAAGAATTTGGAGATAAAGCAGCTGAAAGAAGAGCATATAGCAAC CTTGGAAATGCATATATATTTCTTGGTGAATTTGAAACTGCCTCGGAATACTACAAGAAG ACACTACTGTTGGCCCGACAGCTTAAAGACCGAGCTGTAGAAGCACAGTCTTGTTACAGT CTTGGAAATACATATACTTTACTTCAAGACTATGAAAAGGCCATTGATTATCATCTGAAG CACTTAGCAATTGCTCAAGAGCTGAATGATAGAATTGGTGAAGGAAGAGCATGTTGGAGC TTAGGAAATGCATACACAGCACTAGGAAATCATGATCAAGCAATGCATTTTGCTGAAAAG CACTTGGAAATTTCAAGAGAGGTTGGGGATAAAAGTGGTGAACTAACAGCACGACTTAAT CTCTCAGACCTTCAAATGGTTCTTGGTCTGAGCTACAGCACAAATAACTCCATAATGTCT GAAAATACTGAAATTGATAGCAGTTTGAATGGTGTACGCCCCAAGTTGGGACGCCGGCAT AGTATGGAAAATATGGAACTTATGAAGTTAACACCAGAAAAGGTACAGAACTGGAACAGT GAAATTCTTGCTAAGCAAAAACCTCTTATTGCCAAACCTTCTGCAAAGCTACTCTTTGTC AACAGACTGAAGGGGAAAAAATACAAAACGAATTCCTCCACTAAAGTTCTCCAAGATGCC AGTAATTCTATTGACCACCGAATTCCAAATTCTCAGAGGAAAATCAGTGCAGATACTATT GGAGATGAAGGGTTCTTTGACTTATTAAGCCGATTTCAAAGCAATAGGATGGATGATCAG AGATGTTGCTTACAAGAAAAGAACTGCCATACAGCTTCAACAACAACTTCTTCCACTCCC CCTAAAATGATGCTAAAAACATCATCTGTTCCTGTGGTATCCCCCAACACGGATGAGTTT TTAGATCTTCTTGCCAGCTCACAGAGTCGCCGTCTGGATGACCAGAGGGCTAGTTTCAGT AATTTGCCAGGGCTTCGTCTAACACAAAACAGCCAGTCGGTACTTAGCCACCTGATGACT AATGACAACAAAGAGGCTGATGAAGATTTCTTTGACATCCTTGTAAAATGTCAAGGATCC AGATTAGATGATCAAAGATGTGCTCCACCACCTGCTACCACAAAGGGTCCGACAGTACCA GATGAAGACTTTTTCAGCCTTATTTTACGGTCCCAGGGAAAGAGAATGGATGAACAGAGA GTTCTTTTACAAAGAGATCAAAACAGAGACACTGACTTTGGGCTAAAGGACTTTTTGCAA AATAATGCTTTGTTGGAGTTTAAAAATTCAGGGAAAAAATCGGCAGACCAT
Cloned ORF protein sequence for pF1KB9954 Download>KIBB9954 677 aa MREDHSFHVRYRMEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQ LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQR HLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEE NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSN LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLK HLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGELTARLN LSDLQMVLGLSYSTNNSIMSENTEIDSSLNGVRPKLGRRHSMENMELMKLTPEKVQNWNS EILAKQKPLIAKPSAKLLFVNRLKGKKYKTNSSTKVLQDASNSIDHRIPNSQRKISADTI GDEGFFDLLSRFQSNRMDDQRCCLQEKNCHTASTTTSSTPPKMMLKTSSVPVVSPNTDEF LDLLASSQSRRLDDQRASFSNLPGLRLTQNSQSVLSHLMTNDNKEADEDFFDILVKCQGS RLDDQRCAPPPATTKGPTVPDEDFFSLILRSQGKRMDEQRVLLQRDQNRDTDFGLKDFLQ NNALLEFKNSGKKSADH
Nucleotide Sequence (with vector) for pF1KB9954 Download>pF1KB9954 5144 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGAGAAGAC CATTCTTTTCATGTTCGTTACAGAATGGAAGCTTCTTGCCTAGAGCTGGCCTTGGAAGGG GAACGTCTATGTAAATCAGGAGACTGCCGCGCTGGCGTGTCATTCTTTGAAGCTGCAGTT CAAGTTGGAACTGAAGACCTAAAAACACTTAGCGCTATTTACAGCCAGTTGGGCAATGCT TATTTCTATTTGCATGATTATGCCAAAGCATTAGAATATCACCATCATGATTTAACCCTT GCAAGGACTATTGGAGACCAGCTGGGGGAAGCGAAAGCTAGTGGTAATCTGGGAAACACC TTAAAAGTTCTTGGGAATTTTGACGAAGCCATAGTTTGTTGTCAGCGACACCTAGATATT TCCAGAGAGCTTAATGACAAGGTGGGAGAAGCAAGAGCACTTTACAATCTTGGGAATGTG TATCATGCCAAAGGGAAAAGTTTTGGTTGCCCTGGTCCCCAGGATGTAGGAGAATTTCCA GAAGAAGTGAGAGATGCTCTGCAGGCAGCCGTGGATTTTTATGAGGAAAACCTATCATTA GTGACTGCTTTGGGTGACCGAGCGGCACAAGGACGTGCCTTTGGAAATCTTGGAAACACA CATTACCTCCTTGGCAACTTCAGGGATGCAGTTATAGCTCATGAGCAGCGTCTCCTTATT GCAAAAGAATTTGGAGATAAAGCAGCTGAAAGAAGAGCATATAGCAACCTTGGAAATGCA TATATATTTCTTGGTGAATTTGAAACTGCCTCGGAATACTACAAGAAGACACTACTGTTG GCCCGACAGCTTAAAGACCGAGCTGTAGAAGCACAGTCTTGTTACAGTCTTGGAAATACA TATACTTTACTTCAAGACTATGAAAAGGCCATTGATTATCATCTGAAGCACTTAGCAATT GCTCAAGAGCTGAATGATAGAATTGGTGAAGGAAGAGCATGTTGGAGCTTAGGAAATGCA TACACAGCACTAGGAAATCATGATCAAGCAATGCATTTTGCTGAAAAGCACTTGGAAATT TCAAGAGAGGTTGGGGATAAAAGTGGTGAACTAACAGCACGACTTAATCTCTCAGACCTT CAAATGGTTCTTGGTCTGAGCTACAGCACAAATAACTCCATAATGTCTGAAAATACTGAA ATTGATAGCAGTTTGAATGGTGTACGCCCCAAGTTGGGACGCCGGCATAGTATGGAAAAT ATGGAACTTATGAAGTTAACACCAGAAAAGGTACAGAACTGGAACAGTGAAATTCTTGCT AAGCAAAAACCTCTTATTGCCAAACCTTCTGCAAAGCTACTCTTTGTCAACAGACTGAAG GGGAAAAAATACAAAACGAATTCCTCCACTAAAGTTCTCCAAGATGCCAGTAATTCTATT GACCACCGAATTCCAAATTCTCAGAGGAAAATCAGTGCAGATACTATTGGAGATGAAGGG TTCTTTGACTTATTAAGCCGATTTCAAAGCAATAGGATGGATGATCAGAGATGTTGCTTA CAAGAAAAGAACTGCCATACAGCTTCAACAACAACTTCTTCCACTCCCCCTAAAATGATG CTAAAAACATCATCTGTTCCTGTGGTATCCCCCAACACGGATGAGTTTTTAGATCTTCTT GCCAGCTCACAGAGTCGCCGTCTGGATGACCAGAGGGCTAGTTTCAGTAATTTGCCAGGG CTTCGTCTAACACAAAACAGCCAGTCGGTACTTAGCCACCTGATGACTAATGACAACAAA GAGGCTGATGAAGATTTCTTTGACATCCTTGTAAAATGTCAAGGATCCAGATTAGATGAT CAAAGATGTGCTCCACCACCTGCTACCACAAAGGGTCCGACAGTACCAGATGAAGACTTT TTCAGCCTTATTTTACGGTCCCAGGGAAAGAGAATGGATGAACAGAGAGTTCTTTTACAA AGAGATCAAAACAGAGACACTGACTTTGGGCTAAAGGACTTTTTGCAAAATAATGCTTTG TTGGAGTTTAAAAATTCAGGGAAAAAATCGGCAGACCATGTTTAAACGAATTCGAGCTCG GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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