SVOP ORF clone FXC11534

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC11534

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Clone info.

Species

human

Clone Name

pF1KB4569 Sequence (with vector) Restriction Map

Product ID

FXC11534

HaloTag Clone PID

FHC11534

ORF Sequence

DNA sequence (1644 bp)
Protein sequence (548 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529106]

Gene

KIBB4569

Symbol

SVOP

Description

SV2 related protein

Original Clone ID

fk08874

Features of the cloned ORF sequence

Description

Length: 1644 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 548 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS73520.1 0 100.0 SVOP CCDS47721.1 7.5e-79 39.1 SVOPL CCDS5848.1 2.5e-49 37.2 SVOPL CCDS75261.1 4.8e-20 27.9 SV2C CCDS43331.1 5.1e-20 27.9 SV2C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR005828 111 331 PF00083 General substrate transporter IPR011701 384 523 PF07690 Major facilitator superfamily HMMTigr IPR004749 10 515 TIGR00898 Organic cation transport protein ProfileScan IPR020846 86 513 PS50850 Major facilitator superfamily domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 87 SVLTGLAWMADAMEMMILSILAP 109 SECONDARY 23 2 118 PSWQVALLTSVVFVGMMSSSTLW 140 SECONDARY 23 3 160 TLYYGILSAFAPVYSWILVLRGL 182 PRIMARY 23 4 209 CILLIEVFWAIGTVFEVVLAVFV 231 PRIMARY 23 5 239 WLLILSAVPLLLFAVLCFWLPES 261 PRIMARY 23 6 322 FIWFSNAFSYYGLVLLTTELFQA 344 SECONDARY 23 7 375 DLLWTTLSEFPGVLVTLWIIDRL 397 SECONDARY 23 8 411 SFCSLLLFICVGRNVLTLLLFIA 433 PRIMARY 23 9 461 LGTCSGMARVGALITPFIAQVML 483 SECONDARY 23 10 490 TLAVYSGCCLLAALASCFLPIET 512 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_061181 548 611699 100.0 100.0 XP_005250200 492 611700 39.1 85.9 NP_001132928 492 611700 39.1 85.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4569 Download

>KIBB4569  1644 bp
ATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCCGGTTGTGAAATTCCGTCGCACAGGC
GAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGG
GTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTT
GCCAATCCCACTGATGATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGA
AAATTTCAGTGGAAGCTGTCTGTTCTCACTGGCTTGGCTTGGATGGCTGATGCCATGGAG
ATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGG
CAGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGG
GGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACT
CTGTACTATGGCATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGG
GGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTC
CTTCCCATGAAAGCCAGAGCTAAATGTATTTTGCTGATTGAGGTATTCTGGGCCATCGGG
ACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTTGGCTG
CTCATCCTCTCAGCTGTCCCGCTCCTCCTCTTTGCCGTGCTGTGTTTCTGGCTGCCTGAA
AGTGCAAGGTATGATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGG
ATAGCAACTGAAAACGGAGCTCCCATGCCGCTGGGGAAACTCATCATCTCCAGACAGGAA
GACCGAGGCAAAATGAGGGACCTTTTCACACCCCATTTTAGATGGACAACTTTGCTGCTG
TGGTTTATATGGTTTTCCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAA
CTCTTCCAGGCAGGAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAA
TGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATGGACTTGCTGTGGACCACC
CTCTCTGAGTTTCCAGGTGTCCTTGTGACTCTGTGGATTATTGACCGCCTGGGGCGCAAG
AAGACCATGGCCCTGTGCTTTGTCATCTTCTCCTTCTGCAGCCTCCTGCTGTTTATCTGT
GTTGGAAGAAATGTGCTCACTCTGTTACTCTTCATTGCAAGAGCGTTTATTTCTGGAGGC
TTTCAAGCGGCATATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGC
CTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAG
GTGATGCTGGAATCCTCTGTGTACCTGACTCTGGCAGTTTACAGTGGCTGCTGCCTCCTG
GCTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCC
AGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACC
AGGTCGAACTCTGGCTCTCAGGAA

ORF Protein

Cloned ORF protein sequence for pF1KB4569 Download

>KIBB4569  548 aa
MEEDLFQLRQLPVVKFRRTGESARSEDDTASGEHEVQIEGVHVGLEAVELDDGAAVPKEF
ANPTDDTFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSW
QVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLR
GLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWL
LILSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLIISRQE
DRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAK
CSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFIC
VGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQ
VMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQESSHREWGQEMVGRGMHGAGVT
RSNSGSQE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4569 Download

>pF1KB4569  4757 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGGAGGAC
TTATTCCAGCTAAGGCAGCTGCCGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAAGG
TCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGC
CTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCCCACT
GATGATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGAAAATTTCAGTGG
AAGCTGTCTGTTCTCACTGGCTTGGCTTGGATGGCTGATGCCATGGAGATGATGATCCTC
AGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTG
CTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCA
GACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACTCTGTACTATGGC
ATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGGGGCCTGGTGGGC
TTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAA
GCCAGAGCTAAATGTATTTTGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAG
GTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTTGGCTGCTCATCCTCTCA
GCTGTCCCGCTCCTCCTCTTTGCCGTGCTGTGTTTCTGGCTGCCTGAAAGTGCAAGGTAT
GATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAGCAACTGAA
AACGGAGCTCCCATGCCGCTGGGGAAACTCATCATCTCCAGACAGGAAGACCGAGGCAAA
ATGAGGGACCTTTTCACACCCCATTTTAGATGGACAACTTTGCTGCTGTGGTTTATATGG
TTTTCCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAACTCTTCCAGGCA
GGAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCC
TGCGAGTACCTGAGTGAGGAGGATTACATGGACTTGCTGTGGACCACCCTCTCTGAGTTT
CCAGGTGTCCTTGTGACTCTGTGGATTATTGACCGCCTGGGGCGCAAGAAGACCATGGCC
CTGTGCTTTGTCATCTTCTCCTTCTGCAGCCTCCTGCTGTTTATCTGTGTTGGAAGAAAT
GTGCTCACTCTGTTACTCTTCATTGCAAGAGCGTTTATTTCTGGAGGCTTTCAAGCGGCA
TATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGCCTGGGCACCTGC
AGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAGGTGATGCTGGAA
TCCTCTGTGTACCTGACTCTGGCAGTTTACAGTGGCTGCTGCCTCCTGGCTGCCCTGGCC
TCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAG
TGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCT
GGCTCTCAGGAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT