WDR88 ORF clone FXC10731

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Flexi ORF Clone FXC10731

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Clone info.

Species

human

Clone Name

pF1KE0056 Sequence (with vector) Restriction Map

Product ID

FXC10731

HaloTag Clone PID

FHC10731

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527326]

Gene

KIEE0056

Symbol

WDR88

Alias : PQWD

Description

WD repeat domain 88

Original Clone ID

oc00756

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12429.1 1e-153 100.0 WDR88 CCDS340.1 2e-15 26.3 SNRNP40 CCDS2470.1 2.9e-13 26.9 DAW1 CCDS31869.1 6.7e-11 28.9 POC1B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 117 131 PR00320 G-protein beta WD-40 repeat IPR020472 336 350 PR00320 G-protein beta WD-40 repeat IPR020472 378 392 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 96 130 PF00400 WD40 repeat IPR002372 160 186 PF01011 Pyrrolo-quinoline quinone repeat IPR019781 188 211 PF00400 WD40 repeat IPR019781 227 258 PF00400 WD40 repeat IPR019781 265 301 PF00400 WD40 repeat IPR019781 312 349 PF00400 WD40 repeat IPR019781 356 391 PF00400 WD40 repeat HMMSmart IPR001680 91 130 SM00320 WD40 repeat IPR001680 133 173 SM00320 WD40 repeat IPR018391 152 184 SM00564 Pyrrolo-quinoline quinone beta-propeller repeat IPR001680 176 215 SM00320 WD40 repeat IPR001680 218 258 SM00320 WD40 repeat IPR001680 262 301 SM00320 WD40 repeat IPR001680 310 349 SM00320 WD40 repeat IPR001680 352 391 SM00320 WD40 repeat ProfileScan IPR019782 98 139 PS50082 WD40 repeat 2 IPR017986 98 400 PS50294 WD40-repeat-containing domain IPR019782 156 182 PS50082 WD40 repeat 2 IPR019782 226 267 PS50082 WD40 repeat 2 IPR019782 269 310 PS50082 WD40 repeat 2 IPR019782 317 358 PS50082 WD40 repeat 2 IPR019782 359 400 PS50082 WD40 repeat 2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0056 Download

>KIEE0056  1416 bp
ATGGCCTCCCCGCCGCGGTGCTCCCCGACAGCCCATGACAGGGAATGCAAGTTGCCGCCA
CCCTCCGCCCCCGCCAGCGAGTATTGTCCCGGCAAGCTGTCCTGGGGGACCATGGCGAGG
GCCTTAGGCCGCTTCAAGCTGTCGATCCCGCACACGCACCTGCTGGCCACCCTCGACCCC
CTGGCCTTGGACAGGGAACCACCACCGCATCTGTTGCCTGAGAAGCACCAGGTGCCGGAG
AAATTGATCTGGGGCGACCAGGACCCTCTCTCCAAGATCCCATTTAAAATTCTGAGTGGG
CACGAGCACGCTGTGAGCACCTGCCACTTCTGTGTGGATGACACAAAGCTCCTCAGTGGC
TCCTATGACTGCACTGTGAAGCTGTGGGATCCGGTGGACGGTTCTGTGGTTCGCGATTTT
GAGCACAGGCCCAAAGCTCCTGTTGTAGAGTGCAGCATCACCGGCGACAGCAGCAGAGTC
ATTGCCGCATCCTATGATAAGACAGTGAGGGCCTGGGACCTGGAGACAGGCAAGCTGCTG
TGGAAGGTCAGGTATGATACCTTCATCGTCTCCTGTAAGTTTTCTCCTGATGGTAAATAC
GTGGTCTCAGGCTTCGACGTGGATCATGGAATCTGCATAATGGACGCCGAGAACATCACC
ACCGTTTCCGTCATCAAAGATCATCACACAAGGTCCATCACGTCATGCTGCTTTGACCCC
GACAGCCAGAGGGTGGCTTCTGTCTCATTGGACAGGTGCATCAAGATCTGGGATGTTACA
TCCCAGGCCACGCTGCTCACCATCACTAAGGCACATTCCAATGCAATCTCAAACTGCTGT
TTTACCTTCAGTGGCCATTTCCTGTGTACAAGCTCCTGGGATAAAAACTTAAAAATATGG
AACGTCCACACAGGGGAGTTTCGAAACTGTGGAGCCTGTGTGACTCTGATGCAGGGCCAT
GAAGGTTCTGTCAGTTCCTGTCACTTTGCCAGAGACAGCTCTTTTCTCATTTCTGGAGGG
TTTGATAGGACTGTGGCTATTTGGGATGTAGCAGAAGGCTACCGGAAGCTCTCTTTGAAG
GGCCATAATGACTGGGTGATGGATGTTGCCATTAGCAACAACAAGAAATGGATCCTGTCT
GCTTCCAAGGATAGGACCATGAGACTGTGGAATATTGAAGAAATTGATGAAATTCCTTTG
GTAATCAAGTACAAAAAGGCCGTGGGCTTAAAGTTGAAACAGTGCGAAAGATGTGACAGG
CCTTTCTCCATCTTCAAGAGTGACACCTCTTCTGAAATGTTCACCCAATGCGTGTTCTGC
CGGATAGATACAAGGGGCTTGCCAGCAGATACTTCATCGTCATCATCATCATCGGAAAGG
GAGAACTCACCGCCGCCAAGGGGAAGCAAGGATGAC

ORF Protein

Cloned ORF protein sequence for pF1KE0056 Download

>KIEE0056  472 aa
MASPPRCSPTAHDRECKLPPPSAPASEYCPGKLSWGTMARALGRFKLSIPHTHLLATLDP
LALDREPPPHLLPEKHQVPEKLIWGDQDPLSKIPFKILSGHEHAVSTCHFCVDDTKLLSG
SYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDKTVRAWDLETGKLL
WKVRYDTFIVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDP
DSQRVASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIW
NVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLK
GHNDWVMDVAISNNKKWILSASKDRTMRLWNIEEIDEIPLVIKYKKAVGLKLKQCERCDR
PFSIFKSDTSSEMFTQCVFCRIDTRGLPADTSSSSSSSERENSPPPRGSKDD

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0056 Download

>pF1KE0056  4529 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCTCCCCG
CCGCGGTGCTCCCCGACAGCCCATGACAGGGAATGCAAGTTGCCGCCACCCTCCGCCCCC
GCCAGCGAGTATTGTCCCGGCAAGCTGTCCTGGGGGACCATGGCGAGGGCCTTAGGCCGC
TTCAAGCTGTCGATCCCGCACACGCACCTGCTGGCCACCCTCGACCCCCTGGCCTTGGAC
AGGGAACCACCACCGCATCTGTTGCCTGAGAAGCACCAGGTGCCGGAGAAATTGATCTGG
GGCGACCAGGACCCTCTCTCCAAGATCCCATTTAAAATTCTGAGTGGGCACGAGCACGCT
GTGAGCACCTGCCACTTCTGTGTGGATGACACAAAGCTCCTCAGTGGCTCCTATGACTGC
ACTGTGAAGCTGTGGGATCCGGTGGACGGTTCTGTGGTTCGCGATTTTGAGCACAGGCCC
AAAGCTCCTGTTGTAGAGTGCAGCATCACCGGCGACAGCAGCAGAGTCATTGCCGCATCC
TATGATAAGACAGTGAGGGCCTGGGACCTGGAGACAGGCAAGCTGCTGTGGAAGGTCAGG
TATGATACCTTCATCGTCTCCTGTAAGTTTTCTCCTGATGGTAAATACGTGGTCTCAGGC
TTCGACGTGGATCATGGAATCTGCATAATGGACGCCGAGAACATCACCACCGTTTCCGTC
ATCAAAGATCATCACACAAGGTCCATCACGTCATGCTGCTTTGACCCCGACAGCCAGAGG
GTGGCTTCTGTCTCATTGGACAGGTGCATCAAGATCTGGGATGTTACATCCCAGGCCACG
CTGCTCACCATCACTAAGGCACATTCCAATGCAATCTCAAACTGCTGTTTTACCTTCAGT
GGCCATTTCCTGTGTACAAGCTCCTGGGATAAAAACTTAAAAATATGGAACGTCCACACA
GGGGAGTTTCGAAACTGTGGAGCCTGTGTGACTCTGATGCAGGGCCATGAAGGTTCTGTC
AGTTCCTGTCACTTTGCCAGAGACAGCTCTTTTCTCATTTCTGGAGGGTTTGATAGGACT
GTGGCTATTTGGGATGTAGCAGAAGGCTACCGGAAGCTCTCTTTGAAGGGCCATAATGAC
TGGGTGATGGATGTTGCCATTAGCAACAACAAGAAATGGATCCTGTCTGCTTCCAAGGAT
AGGACCATGAGACTGTGGAATATTGAAGAAATTGATGAAATTCCTTTGGTAATCAAGTAC
AAAAAGGCCGTGGGCTTAAAGTTGAAACAGTGCGAAAGATGTGACAGGCCTTTCTCCATC
TTCAAGAGTGACACCTCTTCTGAAATGTTCACCCAATGCGTGTTCTGCCGGATAGATACA
AGGGGCTTGCCAGCAGATACTTCATCGTCATCATCATCATCGGAAAGGGAGAACTCACCG
CCGCCAAGGGGAAGCAAGGATGACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT