SLC44A1 ORF clone FXC10683

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Flexi ORF Clone FXC10683

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Clone info.

Species

human

Clone Name

pF1KB9940 Sequence (with vector) Restriction Map

Product ID

FXC10683

HaloTag Clone PID

FHC10683

ORF Sequence

DNA sequence (1971 bp)
Protein sequence (657 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528737]

Gene

KIBB9940

Symbol

SLC44A1

Alias : CD92, CDW92, CHTL1, CONATOC, CTL1

Description

solute carrier family 44 (choline transporter), member 1, transcript variant 1

Original Clone ID

cs01640

Features of the cloned ORF sequence

Description

Length: 1971 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 657 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6763.1 0 100.0 SLC44A1 CCDS75868.1 0 100.0 SLC44A1 CCDS83390.1 0 100.0 SLC44A1 CCDS44176.1 1.4e-135 48.7 SLC44A3 CCDS58013.1 2.2e-128 48.9 SLC44A3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007603 292 607 PF04515 Choline transporter-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 33 LLFILFCIGMGFICGFSIATGAA 55 PRIMARY 23 2 211 SKEIILGLCLLSLVLSMILMVII 233 PRIMARY 23 3 241 VWILTILVILGSLGGTGVLWWLY 263 PRIMARY 23 4 282 AEDNLRALLIYAISATVFTVILF 304 PRIMARY 23 5 314 VALTIALFHVAGKVFIHLPLLVF 336 PRIMARY 23 6 342 FFALVLFWVYWIMTLLFLGTTG 363 PRIMARY 22 7 390 VGLIWISEFILACQQMTVAGAVV 412 SECONDARY 23 8 473 ACARCVLKSCICCLWCLEKCLNY 495 SECONDARY 23 9 540 LFLGKVLIVCSTGLAGIMLLNY 561 PRIMARY 22 10 574 IVCLFAFLVAHCFLSIYEMVVDV 596 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_536856 657 606105 100.0 100.0 XP_005251912 719 606105 99.7 99.4 NP_001273659 652 606105 100.0 98.9 NP_001317660 654 606105 100.0 98.9 XP_006717091 675 606105 99.1 99.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9940 Download

>KIBB9940  1971 bp
ATGGGCTGCTGCAGCTCCGCCTCCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCCG
CTGGAGGACCGTAGCTGCACAGACATACCATGGCTGCTGCTCTTCATCCTCTTCTGCATT
GGGATGGGATTTATTTGTGGCTTTTCAATAGCAACAGGTGCAGCAGCAAGACTAGTGTCA
GGATACGACAGCTATGGAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCA
AACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTCTTTTTGGATCCATGCAACCTG
GACTTGATAAACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAA
GAACTGAAAACTCTGAGTGATGTTCAGAAGTTTGCAGAGATAAATGGTTCAGCCCTATGT
AGCTACAACCTAAAGCCTTCTGAATACACTACATCTCCAAAATCTTCTGTTCTCTGCCCC
AAACTACCAGTTCCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGTGAAC
ATTTCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACCTTTGTCAGTGACAATAGTGTC
TTACACAGGCTGATTAGTGGAGTAATGACCAGCAAAGAAATTATATTGGGACTTTGCTTG
TTATCACTAGTTCTATCCATGATTTTGATGGTGATAATCAGGTATATATCAAGAGTACTT
GTGTGGATCTTAACGATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGTGTACTATGG
TGGCTGTATGCAAAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCCTGAGCAGCTTCAG
ATAGCTGAAGACAATCTTCGGGCCCTCCTCATTTATGCCATTTCAGCTACAGTGTTCACA
GTGATCTTATTCCTGATAATGTTGGTTATGCGCAAACGTGTTGCTCTTACCATCGCCTTG
TTCCACGTAGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGTCTTCCAACCCTTCTGG
ACTTTCTTTGCTCTTGTCTTGTTTTGGGTGTACTGGATCATGACACTTCTTTTTCTTGGC
ACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCT
CTGCAGTACATGTGGTGGTACCATGTGGTGGGCCTGATTTGGATCAGTGAATTTATTCTA
GCATGTCAGCAGATGACAGTGGCAGGAGCTGTGGTAACATACTATTTTACTAGGGATAAA
AGGAATTTGCCATTTACACCTATTTTGGCATCAGTAAATCGCCTTATTCGTTACCACCTA
GGTACGGTGGCAAAAGGATCTTTCATTATCACATTAGTCAAAATTCCGCGAATGATCCTT
ATGTATATTCACAGTCAGCTCAAAGGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAA
TCTTGCATTTGTTGCCTTTGGTGTCTTGAAAAGTGCCTAAATTATTTAAATCAGAATGCA
TACACAGCCACAGCTATCAACAGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTTGTC
ATTCTGGTGGAGAATGCTTTGCGAGTGGCTACCATCAACACAGTAGGAGATTTTATGTTA
TTCCTTGGCAAGGTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGATTATGCTGCTCAAC
TACCAGCAGGACTACACAGTATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTGCTTTC
CTAGTCGCTCATTGCTTCCTGTCTATTTATGAAATGGTAGTGGATGTATTATTCTTGTGT
TTTGCCATTGATACAAAATACAATGATGGGAGCCCTGGCAGAGAATTCTATATGGATAAA
GTGCTGATGGAGTTTGTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGTAAGGGAGGC
GTCGCTGATTCCAGAGAGCTAAAGCCGATGGCTTCGGGAGCAAGTTCTGCT

ORF Protein

Cloned ORF protein sequence for pF1KB9940 Download

>KIBB9940  657 aa
MGCCSSASSAAQSSKREWKPLEDRSCTDIPWLLLFILFCIGMGFICGFSIATGAAARLVS
GYDSYGNICGQKNTKLEAIPNSGMDHTQRKYVFFLDPCNLDLINRKIKSVALCVAACPRQ
ELKTLSDVQKFAEINGSALCSYNLKPSEYTTSPKSSVLCPKLPVPASAPIPFFHRCAPVN
ISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVL
VWILTILVILGSLGGTGVLWWLYAKQRRSPKETVTPEQLQIAEDNLRALLIYAISATVFT
VILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWVYWIMTLLFLG
TTGSPVQNEQGFVEFKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDK
RNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCVLK
SCICCLWCLEKCLNYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVATINTVGDFML
FLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLC
FAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGVADSRELKPMASGASSA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9940 Download

>pF1KB9940  5084 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCTGCTGC
AGCTCCGCCTCCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCCGCTGGAGGACCGT
AGCTGCACAGACATACCATGGCTGCTGCTCTTCATCCTCTTCTGCATTGGGATGGGATTT
ATTTGTGGCTTTTCAATAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGATACGACAGC
TATGGAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATG
GACCACACCCAGCGGAAGTATGTATTCTTTTTGGATCCATGCAACCTGGACTTGATAAAC
CGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACT
CTGAGTGATGTTCAGAAGTTTGCAGAGATAAATGGTTCAGCCCTATGTAGCTACAACCTA
AAGCCTTCTGAATACACTACATCTCCAAAATCTTCTGTTCTCTGCCCCAAACTACCAGTT
CCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGTGAACATTTCCTGCTAT
GCCAAGTTTGCAGAGGCCCTGATCACCTTTGTCAGTGACAATAGTGTCTTACACAGGCTG
ATTAGTGGAGTAATGACCAGCAAAGAAATTATATTGGGACTTTGCTTGTTATCACTAGTT
CTATCCATGATTTTGATGGTGATAATCAGGTATATATCAAGAGTACTTGTGTGGATCTTA
ACGATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGTGTACTATGGTGGCTGTATGCA
AAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCCTGAGCAGCTTCAGATAGCTGAAGAC
AATCTTCGGGCCCTCCTCATTTATGCCATTTCAGCTACAGTGTTCACAGTGATCTTATTC
CTGATAATGTTGGTTATGCGCAAACGTGTTGCTCTTACCATCGCCTTGTTCCACGTAGCT
GGCAAGGTCTTCATTCACTTGCCACTGCTAGTCTTCCAACCCTTCTGGACTTTCTTTGCT
CTTGTCTTGTTTTGGGTGTACTGGATCATGACACTTCTTTTTCTTGGCACTACCGGCAGT
CCTGTTCAGAATGAGCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCTGCAGTACATG
TGGTGGTACCATGTGGTGGGCCTGATTTGGATCAGTGAATTTATTCTAGCATGTCAGCAG
ATGACAGTGGCAGGAGCTGTGGTAACATACTATTTTACTAGGGATAAAAGGAATTTGCCA
TTTACACCTATTTTGGCATCAGTAAATCGCCTTATTCGTTACCACCTAGGTACGGTGGCA
AAAGGATCTTTCATTATCACATTAGTCAAAATTCCGCGAATGATCCTTATGTATATTCAC
AGTCAGCTCAAAGGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAATCTTGCATTTGT
TGCCTTTGGTGTCTTGAAAAGTGCCTAAATTATTTAAATCAGAATGCATACACAGCCACA
GCTATCAACAGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTTGTCATTCTGGTGGAG
AATGCTTTGCGAGTGGCTACCATCAACACAGTAGGAGATTTTATGTTATTCCTTGGCAAG
GTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGATTATGCTGCTCAACTACCAGCAGGAC
TACACAGTATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTGCTTTCCTAGTCGCTCAT
TGCTTCCTGTCTATTTATGAAATGGTAGTGGATGTATTATTCTTGTGTTTTGCCATTGAT
ACAAAATACAATGATGGGAGCCCTGGCAGAGAATTCTATATGGATAAAGTGCTGATGGAG
TTTGTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGTAAGGGAGGCGTCGCTGATTCC
AGAGAGCTAAAGCCGATGGCTTCGGGAGCAAGTTCTGCTGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT