SSBP2 ORF clone FXC10585

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Flexi ORF Clone FXC10585

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Clone info.

Species

human

Clone Name

pF1KB6541 Sequence (with vector) Restriction Map

Product ID

FXC10585

HaloTag Clone PID

FHC10585

ORF Sequence

DNA sequence (1083 bp)
Protein sequence (361 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528651]

Gene

KIBB6541

Symbol

SSBP2

Alias : HSPC116, SOSS-B2

Description

single-stranded DNA binding protein 2, transcript variant 2

Original Clone ID

cs01141

Features of the cloned ORF sequence

Description

Length: 1083 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 361 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4056.1 1.8e-65 100.0 SSBP2 CCDS75268.1 9e-65 97.8 SSBP2 CCDS30726.1 9.5e-55 83.2 SSBP3 CCDS32960.1 1.3e-47 73.7 SSBP4 CCDS590.1 1.5e-44 79.2 SSBP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR008116 10 29 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 31 46 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 47 64 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 65 78 PR01743 Sequence-specific single-strand DNA-binding protein IPR008116 79 94 PR01743 Sequence-specific single-strand DNA-binding protein HMMPfam IPR007591 83 343 PF04503 Single-stranded DNA-binding protein HMMSmart IPR006594 18 50 SM00667 LisH dimerisation motif ProfileScan IPR006594 18 50 PS50896 LisH dimerisation motif
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036578 361 607389 100.0 100.0 NP_001243661 369 607389 97.8 100.0 XP_016864794 357 607389 99.7 94.5 XP_016864793 365 607389 97.4 94.5 XP_016864795 328 607389 98.5 90.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6541 Download

>KIBB6541  1083 bp
ATGTACGGCAAAGGCAAGAGTAACAGCAGCGCCGTCCCGTCCGACAGCCAGGCCCGGGAG
AAGTTAGCACTCTACGTATATGAATATCTGCTCCATGTAGGAGCTCAGAAATCAGCTCAA
ACATTTTTATCAGAGATAAGATGGGAAAAAAACATCACATTGGGGGAACCACCAGGATTC
TTACATTCTTGGTGGTGTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGTGAA
ACATGTGAACACTCAAGTGAAGCAAAAGCCTTCCATGATTACAGTGCTGCAGCAGCTCCC
AGTCCAGTGCTAGGAAACATTCCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCACCA
GGGTTCTTTCAGCCTTTTATGTCACCTCGGTACCCTGGAGGTCCAAGGCCCCCATTGAGG
ATACCTAATCAGGCACTTGGAGGTGTCCCAGGAAGTCAGCCATTACTCCCCAGTGGAATG
GATCCAACTCGACAACAAGGACATCCAAATATGGGTGGGCCAATGCAGAGAATGACTCCT
CCAAGAGGAATGGTGCCCTTAGGACCACAGAACTATGGAGGTGCAATGAGACCCCCACTG
AATGCTTTAGGTGGCCCTGGAATGCCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCT
TGGCCAAACCCAACAAATGCCAATTCAATACCATACTCCTCAGCATCTCCTGGGAATTAT
GTAGGTCCTCCAGGAGGTGGAGGGCCACCAGGAACACCCATCATGCCTAGTCCAGCAGAT
TCAACCAACTCTGGTGATAACATGTATACTTTAATGAATGCAGTACCTCCTGGACCTAAC
AGACCTAATTTTCCAATGGGCCCTGGGTCAGATGGTCCCATGGGTGGATTAGGAGGAATG
GAGTCACATCACATGAATGGCTCTTTAGGCTCAGGAGATATGGACAGTATTTCCAAGAAT
TCTCCCAATAATATGAGCCTGAGTAATCAACCGGGCACTCCAAGGGATGATGGCGAAATG
GGGGGAAATTTCTTAAATCCTTTTCAGAGTGAGAGTTACTCCCCTAGCATGACAATGAGC
GTG

ORF Protein

Cloned ORF protein sequence for pF1KB6541 Download

>KIBB6541  361 aa
MYGKGKSNSSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGF
LHSWWCVFWDLYCAAPERRETCEHSSEAKAFHDYSAAAAPSPVLGNIPPGDGMPVGPVPP
GFFQPFMSPRYPGGPRPPLRIPNQALGGVPGSQPLLPSGMDPTRQQGHPNMGGPMQRMTP
PRGMVPLGPQNYGGAMRPPLNALGGPGMPGMNMGPGGGRPWPNPTNANSIPYSSASPGNY
VGPPGGGGPPGTPIMPSPADSTNSGDNMYTLMNAVPPGPNRPNFPMGPGSDGPMGGLGGM
ESHHMNGSLGSGDMDSISKNSPNNMSLSNQPGTPRDDGEMGGNFLNPFQSESYSPSMTMS
V

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6541 Download

>pF1KB6541  4196 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTACGGCAAA
GGCAAGAGTAACAGCAGCGCCGTCCCGTCCGACAGCCAGGCCCGGGAGAAGTTAGCACTC
TACGTATATGAATATCTGCTCCATGTAGGAGCTCAGAAATCAGCTCAAACATTTTTATCA
GAGATAAGATGGGAAAAAAACATCACATTGGGGGAACCACCAGGATTCTTACATTCTTGG
TGGTGTGTATTTTGGGATCTCTACTGTGCAGCTCCAGAGAGACGTGAAACATGTGAACAC
TCAAGTGAAGCAAAAGCCTTCCATGATTACAGTGCTGCAGCAGCTCCCAGTCCAGTGCTA
GGAAACATTCCCCCAGGAGATGGCATGCCAGTAGGTCCTGTACCACCAGGGTTCTTTCAG
CCTTTTATGTCACCTCGGTACCCTGGAGGTCCAAGGCCCCCATTGAGGATACCTAATCAG
GCACTTGGAGGTGTCCCAGGAAGTCAGCCATTACTCCCCAGTGGAATGGATCCAACTCGA
CAACAAGGACATCCAAATATGGGTGGGCCAATGCAGAGAATGACTCCTCCAAGAGGAATG
GTGCCCTTAGGACCACAGAACTATGGAGGTGCAATGAGACCCCCACTGAATGCTTTAGGT
GGCCCTGGAATGCCTGGAATGAACATGGGTCCAGGTGGTGGTAGACCTTGGCCAAACCCA
ACAAATGCCAATTCAATACCATACTCCTCAGCATCTCCTGGGAATTATGTAGGTCCTCCA
GGAGGTGGAGGGCCACCAGGAACACCCATCATGCCTAGTCCAGCAGATTCAACCAACTCT
GGTGATAACATGTATACTTTAATGAATGCAGTACCTCCTGGACCTAACAGACCTAATTTT
CCAATGGGCCCTGGGTCAGATGGTCCCATGGGTGGATTAGGAGGAATGGAGTCACATCAC
ATGAATGGCTCTTTAGGCTCAGGAGATATGGACAGTATTTCCAAGAATTCTCCCAATAAT
ATGAGCCTGAGTAATCAACCGGGCACTCCAAGGGATGATGGCGAAATGGGGGGAAATTTC
TTAAATCCTTTTCAGAGTGAGAGTTACTCCCCTAGCATGACAATGAGCGTGGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT