NXF1 ORF clone FXC08203

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Flexi ORF Clone FXC08203

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Clone info.

Species

human

Clone Name

pF1KB6112 Sequence (with vector) Restriction Map

Product ID

FXC08203

HaloTag Clone PID

FHC08203

ORF Sequence

DNA sequence (1857 bp)
Protein sequence (619 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528336]

Gene

KIBB6112

Symbol

NXF1

Alias : MEX67, TAP

Description

nuclear RNA export factor 1, transcript variant 1

Original Clone ID

cs00712

Features of the cloned ORF sequence

Description

Length: 1857 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 619 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8037.1 0 100.0 NXF1 CCDS43979.1 4.3e-132 59.3 NXF2B CCDS14497.1 4.3e-132 59.3 NXF2 CCDS44629.1 5.6e-124 99.1 NXF1 CCDS14491.2 8.7e-63 54.7 NXF5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom IPR015245 111 183 PD043466 Tap HMMPfam NULL 113 199 PF09162 NULL IPR001611 292 311 PF00560 Leucine-rich repeat IPR002075 387 535 PF02136 Nuclear transport factor 2 IPR005637 568 618 PF03943 TAP HMMSmart IPR005637 556 619 SM00804 TAP ProfileScan IPR001611 266 287 PS51450 Leucine-rich repeat IPR001611 292 313 PS51450 Leucine-rich repeat IPR001611 316 337 PS51450 Leucine-rich repeat IPR018222 386 536 PS50177 Nuclear transport factor 2 IPR005637 565 619 PS51281 TAP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006353 619 602647 100.0 100.0 NP_071336 626 300315 59.3 98.4 NP_071335 531 300316 49.7 90.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6112 Download

>KIBB6112  1857 bp
ATGGCGGACGAGGGGAAGTCGTACAGCGAACACGATGATGAACGCGTTAATTTCCCTCAA
AGAAAGAAGAAAGGCCGGGGTCCCTTCCGGTGGAAATATGGTGAAGGAAACCGTAGGTCT
GGAAGAGGCGGTTCTGGTATTCGGTCTTCCCGCCTTGAGGAAGATGATGGAGATGTGGCA
ATGAGTGATGCCCAGGATGGTCCCCGAGTACGATACAACCCCTATACCACCCGACCTAAC
CGTCGGGGTGATACTTGGCATGATCGAGATCGCATTCATGTTACTGTGCGGAGAGACAGA
GCTCCTCCAGAGAGAGGAGGGGCTGGCACCAGCCAGGATGGGACCTCAAAGAACTGGTTC
AAGATTACAATTCCTTATGGCAGAAAGTATGACAAGGCATGGCTCCTGAGCATGATTCAG
AGCAAGTGCAGTGTGCCCTTCACCCCTATTGAGTTTCACTATGAGAATACACGGGCCCAG
TTCTTCGTTGAAGACGCCAGTACTGCCTCTGCATTGAAGGCTGTCAACTATAAGATTTTG
GATCGGGAGAACCGAAGGATATCTATCATCATCAACTCTTCTGCTCCACCCCACACTATA
CTGAATGAACTGAAGCCAGAACAAGTAGAACAGCTAAAGCTGATCATGAGCAAACGATAC
GATGGCTCCCAACAAGCCCTTGACCTCAAAGGCCTCCGTTCAGACCCAGATTTGGTGGCC
CAGAACATTGACGTTGTCCTGAATCGCAGAAGCTGTATGGCAGCTACCCTGAGGATCATT
GAAGAGAACATCCCTGAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTG
GATGACATGTCTAGCATTGTTCAGAAGGCACCCAACCTGAAGATCCTAAACCTTTCTGGA
AATGAATTGAAGTCTGAGCGGGAATTGGACAAGATAAAGGGGCTGAAGCTAGAAGAGCTC
TGGCTCGATGGAAACTCCCTGTGTGACACCTTCCGAGACCAGTCCACCTACATCAGCGCC
ATTCGCGAACGATTTCCCAAGTTACTACGCCTGGATGGCCATGAGCTACCCCCACCAATT
GCCTTTGATGTTGAAGCCCCCACGACGTTACCGCCCTGCAAGGGAAGCTATTTTGGAACA
GAAAACTTGAAGAGTCTGGTCTTGCACTTCCTGCAACAGTACTATGCAATTTACGACTCT
GGAGACCGACAAGGGCTCCTGGATGCCTACCATGATGGGGCCTGCTGTTCCCTGAGCATT
CCTTTCATTCCTCAGAACCCTGCCCGAAGCAGCTTAGCCGAGTATTTCAAGGATAGCAGA
AATGTGAAGAAGCTTAAAGACCCTACCTTGCGGTTCCGGCTGCTGAAGCACACGCGTCTC
AACGTTGTTGCCTTCCTCAATGAGTTGCCCAAAACCCAGCACGACGTCAATTCCTTCGTG
GTAGACATAAGCGCCCAGACAAGCACATTGCTGTGTTTTTCTGTCAATGGAGTCTTCAAG
GAAGTGGACGGAAAGTCCCGGGATTCTTTGCGAGCCTTCACCCGGACATTCATTGCTGTT
CCTGCTAGCAATTCAGGGCTATGTATTGTAAATGATGAGCTATTTGTGCGGAATGCCAGT
TCTGAAGAGATCCAAAGAGCCTTCGCTATGCCTGCACCCACGCCTTCCTCCAGCCCGGTG
CCCACCCTCTCTCCAGAGCAGCAGGAAATGTTGCAAGCATTCTCTACCCAGTCTGGCATG
AACCTCGAGTGGTCCCAGAAGTGCCTTCAGGACAACAACTGGGACTACACCAGATCTGCC
CAGGCCTTCACTCATCTCAAGGCCAAGGGCGAGATCCCAGAAGTGGCATTCATGAAG

ORF Protein

Cloned ORF protein sequence for pF1KB6112 Download

>KIBB6112  619 aa
MADEGKSYSEHDDERVNFPQRKKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDGDVA
MSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWF
KITIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKIL
DRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG
NELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI
PFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNAS
SEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTHLKAKGEIPEVAFMK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6112 Download

>pF1KB6112  4970 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGACGAG
GGGAAGTCGTACAGCGAACACGATGATGAACGCGTTAATTTCCCTCAAAGAAAGAAGAAA
GGCCGGGGTCCCTTCCGGTGGAAATATGGTGAAGGAAACCGTAGGTCTGGAAGAGGCGGT
TCTGGTATTCGGTCTTCCCGCCTTGAGGAAGATGATGGAGATGTGGCAATGAGTGATGCC
CAGGATGGTCCCCGAGTACGATACAACCCCTATACCACCCGACCTAACCGTCGGGGTGAT
ACTTGGCATGATCGAGATCGCATTCATGTTACTGTGCGGAGAGACAGAGCTCCTCCAGAG
AGAGGAGGGGCTGGCACCAGCCAGGATGGGACCTCAAAGAACTGGTTCAAGATTACAATT
CCTTATGGCAGAAAGTATGACAAGGCATGGCTCCTGAGCATGATTCAGAGCAAGTGCAGT
GTGCCCTTCACCCCTATTGAGTTTCACTATGAGAATACACGGGCCCAGTTCTTCGTTGAA
GACGCCAGTACTGCCTCTGCATTGAAGGCTGTCAACTATAAGATTTTGGATCGGGAGAAC
CGAAGGATATCTATCATCATCAACTCTTCTGCTCCACCCCACACTATACTGAATGAACTG
AAGCCAGAACAAGTAGAACAGCTAAAGCTGATCATGAGCAAACGATACGATGGCTCCCAA
CAAGCCCTTGACCTCAAAGGCCTCCGTTCAGACCCAGATTTGGTGGCCCAGAACATTGAC
GTTGTCCTGAATCGCAGAAGCTGTATGGCAGCTACCCTGAGGATCATTGAAGAGAACATC
CCTGAGCTATTGTCCTTGAACTTGAGCAACAACAGGCTGTACAGGCTGGATGACATGTCT
AGCATTGTTCAGAAGGCACCCAACCTGAAGATCCTAAACCTTTCTGGAAATGAATTGAAG
TCTGAGCGGGAATTGGACAAGATAAAGGGGCTGAAGCTAGAAGAGCTCTGGCTCGATGGA
AACTCCCTGTGTGACACCTTCCGAGACCAGTCCACCTACATCAGCGCCATTCGCGAACGA
TTTCCCAAGTTACTACGCCTGGATGGCCATGAGCTACCCCCACCAATTGCCTTTGATGTT
GAAGCCCCCACGACGTTACCGCCCTGCAAGGGAAGCTATTTTGGAACAGAAAACTTGAAG
AGTCTGGTCTTGCACTTCCTGCAACAGTACTATGCAATTTACGACTCTGGAGACCGACAA
GGGCTCCTGGATGCCTACCATGATGGGGCCTGCTGTTCCCTGAGCATTCCTTTCATTCCT
CAGAACCCTGCCCGAAGCAGCTTAGCCGAGTATTTCAAGGATAGCAGAAATGTGAAGAAG
CTTAAAGACCCTACCTTGCGGTTCCGGCTGCTGAAGCACACGCGTCTCAACGTTGTTGCC
TTCCTCAATGAGTTGCCCAAAACCCAGCACGACGTCAATTCCTTCGTGGTAGACATAAGC
GCCCAGACAAGCACATTGCTGTGTTTTTCTGTCAATGGAGTCTTCAAGGAAGTGGACGGA
AAGTCCCGGGATTCTTTGCGAGCCTTCACCCGGACATTCATTGCTGTTCCTGCTAGCAAT
TCAGGGCTATGTATTGTAAATGATGAGCTATTTGTGCGGAATGCCAGTTCTGAAGAGATC
CAAAGAGCCTTCGCTATGCCTGCACCCACGCCTTCCTCCAGCCCGGTGCCCACCCTCTCT
CCAGAGCAGCAGGAAATGTTGCAAGCATTCTCTACCCAGTCTGGCATGAACCTCGAGTGG
TCCCAGAAGTGCCTTCAGGACAACAACTGGGACTACACCAGATCTGCCCAGGCCTTCACT
CATCTCAAGGCCAAGGGCGAGATCCCAGAAGTGGCATTCATGAAGGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT