HBP1 ORF clone FXC05397

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Flexi ORF Clone FXC05397

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Clone info.

Species

human

Clone Name

pF1KB7788 Sequence (with vector) Restriction Map

Product ID

FXC05397

HaloTag Clone PID

FHC05397

ORF Sequence

DNA sequence (1542 bp)
Protein sequence (514 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463745]

Gene

KIBB7788

Symbol

HBP1

Description

HMG-box transcription factor 1, transcript variant 2

Original Clone ID

cs00288

Features of the cloned ORF sequence

Description

Length: 1542 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 514 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5741.1 5.8e-205 100.0 HBP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013723 215 339 PF08517 Ataxin-1/HBP1 module (AXH) IPR000910 435 496 PF00505 High mobility group HMMSmart IPR003652 210 340 SM00536 Ataxin IPR000910 433 503 SM00398 High mobility group ProfileScan IPR013723 203 345 PS51148 Ataxin-1/HBP1 module (AXH) IPR000910 434 502 PS50118 High mobility group
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005250323 514 616714 100.0 100.0 NP_036389 514 616714 100.0 100.0 XP_016867456 514 616714 100.0 100.0 XP_005250324 514 616714 100.0 100.0 NP_001231191 524 616714 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7788 Download

>KIBB7788  1542 bp
ATGGTGTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGTTGGTG
ATGGACAAGAGAGCCTCAGGAATGAATGACTCATTGGAGTTGCTGCAGTGTAATGAGAAT
TTGCCATCTTCACCTGGATATAACTCCTGTGATGAACACATGGAGCTTGATGACCTTCCT
GAACTTCAGGCAGTTCAAAGTGATCCTACCCAATCTGGCATGTACCAGCTGAGTTCAGAT
GTTTCACATCAAGAATACCCAAGATCATCTTGGAACCAAAATACCTCAGACATACCAGAA
ACTACTTACCGTGAAAATGAGGTGGACTGGCTAACAGAATTGGCAAATATCGCGACCAGT
CCACAAAGTCCACTGATGCAGTGCTCATTTTACAATAGATCATCTCCTGTACACATCATA
GCCACTAGCAAAAGTTTACATTCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCGAAG
AGTGAACCAGCCTTCCCTCATCACCATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG
GCAAATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCTCCCTGTCAGATGATGATGAT
TTGGGATGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTTTTTTGAAAGGCACACGA
CTGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTTGCTAGAGCT
GAAGGCTGTGATAATGAGGAAGATCTTCAAATGGGCATTCACAAGGGCTATGGTTCTGAT
GGTCTAAAGTTGTTATCACATGAAGAAAGTGTATCATTTGGCGAGTCTGTACTGAAGTTG
ACTTTTGATCCTGGTACAGTAGAAGATGGTTTACTTACCGTAGAGTGTAAGCTGGACCAC
CCTTTCTATGTTAAAAATAAAGGTTGGTCATCATTTTATCCAAGCTTGACTGTGGTACAG
CATGGCATTCCATGTTGTGAAGTTCATATTGGCGATGTATGTCTACCTCCTGGACACCCC
GATGCCATTAATTTTGATGATTCAGGTGTTTTTGATACATTTAAAAGCTATGACTTCACA
CCTATGGATTCTTCTGCAGTTTATGTGTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCT
TTGTCTTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGT
GGCTCACCTGGATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAAC
CACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAGACCAATGAATGCC
TTCATGCTTTTTGCCAAAAAATACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGAT
AACAGAGCCATAAGTGTGATCCTTGGTGACAGGTGGAAGAAAATGAAGAATGAAGAGAGA
AGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTTAAATCCTGAC
TGTTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACAACAT

ORF Protein

Cloned ORF protein sequence for pF1KB7788 Download

>KIBB7788  514 aa
MVWEVKTNQMPNAVQKLLLVMDKRASGMNDSLELLQCNENLPSSPGYNSCDEHMELDDLP
ELQAVQSDPTQSGMYQLSSDVSHQEYPRSSWNQNTSDIPETTYRENEVDWLTELANIATS
PQSPLMQCSFYNRSSPVHIIATSKSLHSYARPPPVSSSSKSEPAFPHHHWKEETPVRHER
ANSESESGIFCMSSLSDDDDLGWCNSWPSTVWHCFLKGTRLCFHKGSNKEWQDVEDFARA
EGCDNEEDLQMGIHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDGLLTVECKLDH
PFYVKNKGWSSFYPSLTVVQHGIPCCEVHIGDVCLPPGHPDAINFDDSGVFDTFKSYDFT
PMDSSAVYVLSSMARQRRASLSCGGPGGQDFARSGFSKNCGSPGSSQLSSNSLYAKAVKN
HSSGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEER
RMYTLEAKALAEEQKRLNPDCWKRKRTNSGSQQH

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7788 Download

>pF1KB7788  4655 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGTGGGAA
GTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGTTGGTGATGGACAAGAGA
GCCTCAGGAATGAATGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCTTCA
CCTGGATATAACTCCTGTGATGAACACATGGAGCTTGATGACCTTCCTGAACTTCAGGCA
GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAGCTGAGTTCAGATGTTTCACATCAA
GAATACCCAAGATCATCTTGGAACCAAAATACCTCAGACATACCAGAAACTACTTACCGT
GAAAATGAGGTGGACTGGCTAACAGAATTGGCAAATATCGCGACCAGTCCACAAAGTCCA
CTGATGCAGTGCTCATTTTACAATAGATCATCTCCTGTACACATCATAGCCACTAGCAAA
AGTTTACATTCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCGAAGAGTGAACCAGCC
TTCCCTCATCACCATTGGAAGGAGGAAACACCAGTAAGACACGAAAGGGCAAATAGTGAG
TCAGAATCTGGCATTTTCTGCATGTCCTCCCTGTCAGATGATGATGATTTGGGATGGTGC
AATTCCTGGCCTTCAACTGTCTGGCACTGTTTTTTGAAAGGCACACGACTGTGCTTTCAT
AAGGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTTGCTAGAGCTGAAGGCTGTGAT
AATGAGGAAGATCTTCAAATGGGCATTCACAAGGGCTATGGTTCTGATGGTCTAAAGTTG
TTATCACATGAAGAAAGTGTATCATTTGGCGAGTCTGTACTGAAGTTGACTTTTGATCCT
GGTACAGTAGAAGATGGTTTACTTACCGTAGAGTGTAAGCTGGACCACCCTTTCTATGTT
AAAAATAAAGGTTGGTCATCATTTTATCCAAGCTTGACTGTGGTACAGCATGGCATTCCA
TGTTGTGAAGTTCATATTGGCGATGTATGTCTACCTCCTGGACACCCCGATGCCATTAAT
TTTGATGATTCAGGTGTTTTTGATACATTTAAAAGCTATGACTTCACACCTATGGATTCT
TCTGCAGTTTATGTGTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA
GGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCTCACCTGGA
TCATCACAGCTCTCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGG
ACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAGACCAATGAATGCCTTCATGCTTTTT
GCCAAAAAATACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGATAACAGAGCCATA
AGTGTGATCCTTGGTGACAGGTGGAAGAAAATGAAGAATGAAGAGAGAAGAATGTACACA
TTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTTAAATCCTGACTGTTGGAAGAGG
AAAAGAACCAATTCAGGCTCACAACAACATGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT