CDC40 ORF clone FXC03965

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Flexi ORF Clone FXC03965

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Clone info.

Species

human

Clone Name

pF1KB9989 Sequence (with vector) Restriction Map

Product ID

FXC03965

HaloTag Clone PID

FHC03965

ORF Sequence

DNA sequence (1737 bp)
Protein sequence (579 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528038]

Gene

KIBB9989

Symbol

CDC40

Alias : EHB3, PCH15, PRP17, PRPF17

Description

cell division cycle 40

Original Clone ID

cs01689

Features of the cloned ORF sequence

Description

Length: 1737 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 579 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5081.1 4.2e-169 100.0 CDC40 CCDS32157.1 8.2e-18 25.8 WDR25 CCDS6981.1 4.6e-15 27.8 WDR5 CCDS340.1 9.5e-13 26.4 SNRNP40 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019781 279 317 PF00400 WD40 repeat IPR019781 323 360 PF00400 WD40 repeat IPR019781 374 404 PF00400 WD40 repeat IPR019781 409 446 PF00400 WD40 repeat IPR019781 513 536 PF00400 WD40 repeat IPR019781 544 579 PF00400 WD40 repeat HMMSmart IPR001680 277 317 SM00320 WD40 repeat IPR001680 321 360 SM00320 WD40 repeat IPR001680 363 404 SM00320 WD40 repeat IPR001680 407 446 SM00320 WD40 repeat IPR001680 452 489 SM00320 WD40 repeat IPR001680 495 536 SM00320 WD40 repeat IPR001680 539 579 SM00320 WD40 repeat ProfileScan IPR019782 284 318 PS50082 WD40 repeat 2 IPR017986 284 579 PS50294 WD40-repeat-containing domain IPR019782 328 369 PS50082 WD40 repeat 2 IPR019782 414 446 PS50082 WD40 repeat 2 IPR019782 514 545 PS50082 WD40 repeat 2 IPR019782 546 579 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056975 579 605585 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9989 Download

>KIBB9989  1737 bp
ATGTCGGCTGCGATTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTTCAGGGTCCGAATCG
GACTCGGACAGTGAGAGCAGTCGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTG
ACTAAATCGCCTTCATCAAAGCCGTCTCTAGCAGTGGCAGTGGACTCGGCTCCGGAGGTG
GCAGTTAAGGAAGATTTGGAGACTGGAGTTCACCTTGACCCTGCCGTCAAAGAAGTTCAG
TATAATCCTACCTATGAGACCATGTTTGCTCCTGAGTTTGGACCAGAAAATCCCTTTAGG
ACACAGCAAATGGCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCTCATATC
AATGATTTCATGTTTGAGCAGCAAAGGAGAACTTTTGCAACATATGGTTATGCATTAGAC
CCTTCATTAGATAATCATCAAGTGTCTGCTAAATATATTGGTTCTGTAGAAGAAGCTGAA
AAAAATCAAGGTTTAACTGTATTTGAAACTGGTCAGAAGAAAACAGAAAAGAGGAAAAAG
TTTAAAGAAAATGATGCATCCAATATTGATGGTTTTTTGGGACCATGGGCAAAATATGTG
GATGAAAAAGATGTAGCCAAACCTTCAGAAGAAGAGCAAAAAGAATTGGATGAAATCACA
GCAAAGAGGCAGAAAAAAGGAAAACAGGAAGAAGAGAAACCTGGGGAGGAGAAGACAATC
TTACATGTTAAAGAAATGTATGACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGAT
GTTGGTGTTAATCTACGGTCAACTATGCCACCTGAGAAGTGTTATCTTCCCAAAAAACAA
ATTCATGTGTGGTCTGGACACACAAAGGGCGTCAGTGCAGTCAGATTGTTTCCTCTCTCT
GGCCATTTATTGCTGTCTTGTTCCATGGACTGTAAAATTAAGCTATGGGAGGTTTATGGA
GAACGGCGCTGTCTGAGAACATTTATTGGTCACAGTAAGGCTGTTAGGGATATCTGCTTC
AATACTGCAGGAACACAGTTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTCTGGGAC
ACTGAGACAGGACAGTGTATATCAAGATTTACAAACCGAAAAGTACCTTATTGTGTCAAA
TTCAATCCTGATGAAGATAAGCAAAATCTCTTTGTGGCTGGGATGTCTGATAAGAAGATT
GTGCAATGGGACATTCGAAGTGGAGAAATTGTGCAGGAATATGATCGGCATTTGGGAGCT
GTCAACACCATTGTTTTTGTGGATGAGAATAGGAGATTTGTGAGCACATCTGATGATAAA
AGCCTAAGAGTTTGGGAATGGGATATCCCTGTGGATTTCAAGTACATAGCAGAACCCAGT
ATGCACTCAATGCCTGCAGTGACTTTGTCTCCAAATGGAAAATGGCTAGCATGCCAATCA
ATGGACAACCAAATCTTAATTTTTGGAGCACAGAACAGATTTAGATTAAATAAGAAAAAA
ATTTTTAAGGGCCATATGGTAGCAGGCTATGCTTGTCAGGTGGACTTTTCACCAGACATG
AGTTATGTGATTTCAGGAGATGGAAATGGAAAATTAAACATTTGGGACTGGAAGACCACA
AAACTCTACAGTCGATTTAAAGCTCATGATAAAGTGTGTATAGGTGCAGTGTGGCATCCT
CATGAAACTTCTAAGGTCATAACATGTGGTTGGGATGGTCTCATTAAATTGTGGGAT

ORF Protein

Cloned ORF protein sequence for pF1KB9989 Download

>KIBB9989  579 aa
MSAAIAALAASYGSGSGSESDSDSESSRCPLPAADSLMHLTKSPSSKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9989 Download

>pF1KB9989  4850 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCGGCTGCG
ATTGCAGCTCTGGCCGCTTCCTATGGTTCGGGTTCAGGGTCCGAATCGGACTCGGACAGT
GAGAGCAGTCGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGACTAAATCGCCT
TCATCAAAGCCGTCTCTAGCAGTGGCAGTGGACTCGGCTCCGGAGGTGGCAGTTAAGGAA
GATTTGGAGACTGGAGTTCACCTTGACCCTGCCGTCAAAGAAGTTCAGTATAATCCTACC
TATGAGACCATGTTTGCTCCTGAGTTTGGACCAGAAAATCCCTTTAGGACACAGCAAATG
GCTGCCCCTAGAAATATGCTTTCTGGATATGCCGAACCAGCTCATATCAATGATTTCATG
TTTGAGCAGCAAAGGAGAACTTTTGCAACATATGGTTATGCATTAGACCCTTCATTAGAT
AATCATCAAGTGTCTGCTAAATATATTGGTTCTGTAGAAGAAGCTGAAAAAAATCAAGGT
TTAACTGTATTTGAAACTGGTCAGAAGAAAACAGAAAAGAGGAAAAAGTTTAAAGAAAAT
GATGCATCCAATATTGATGGTTTTTTGGGACCATGGGCAAAATATGTGGATGAAAAAGAT
GTAGCCAAACCTTCAGAAGAAGAGCAAAAAGAATTGGATGAAATCACAGCAAAGAGGCAG
AAAAAAGGAAAACAGGAAGAAGAGAAACCTGGGGAGGAGAAGACAATCTTACATGTTAAA
GAAATGTATGACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTTGGTGTTAAT
CTACGGTCAACTATGCCACCTGAGAAGTGTTATCTTCCCAAAAAACAAATTCATGTGTGG
TCTGGACACACAAAGGGCGTCAGTGCAGTCAGATTGTTTCCTCTCTCTGGCCATTTATTG
CTGTCTTGTTCCATGGACTGTAAAATTAAGCTATGGGAGGTTTATGGAGAACGGCGCTGT
CTGAGAACATTTATTGGTCACAGTAAGGCTGTTAGGGATATCTGCTTCAATACTGCAGGA
ACACAGTTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTCTGGGACACTGAGACAGGA
CAGTGTATATCAAGATTTACAAACCGAAAAGTACCTTATTGTGTCAAATTCAATCCTGAT
GAAGATAAGCAAAATCTCTTTGTGGCTGGGATGTCTGATAAGAAGATTGTGCAATGGGAC
ATTCGAAGTGGAGAAATTGTGCAGGAATATGATCGGCATTTGGGAGCTGTCAACACCATT
GTTTTTGTGGATGAGAATAGGAGATTTGTGAGCACATCTGATGATAAAAGCCTAAGAGTT
TGGGAATGGGATATCCCTGTGGATTTCAAGTACATAGCAGAACCCAGTATGCACTCAATG
CCTGCAGTGACTTTGTCTCCAAATGGAAAATGGCTAGCATGCCAATCAATGGACAACCAA
ATCTTAATTTTTGGAGCACAGAACAGATTTAGATTAAATAAGAAAAAAATTTTTAAGGGC
CATATGGTAGCAGGCTATGCTTGTCAGGTGGACTTTTCACCAGACATGAGTTATGTGATT
TCAGGAGATGGAAATGGAAAATTAAACATTTGGGACTGGAAGACCACAAAACTCTACAGT
CGATTTAAAGCTCATGATAAAGTGTGTATAGGTGCAGTGTGGCATCCTCATGAAACTTCT
AAGGTCATAACATGTGGTTGGGATGGTCTCATTAAATTGTGGGATGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT