SRSF12 ORF clone FXC03924

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Flexi ORF Clone FXC03924

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Clone info.

Species

human

Clone Name

pF1KE0673 Sequence (with vector) Restriction Map

Product ID

FXC03924

HaloTag Clone PID

FHC03924

ORF Sequence

DNA sequence (783 bp)
Protein sequence (261 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527997]

Gene

KIEE0673

Symbol

SRSF12

Alias : SFRS13B, SFRS19, SRrp35

Description

serine/arginine-rich splicing factor 12

Original Clone ID

cs02173

Features of the cloned ORF sequence

Description

Length: 783 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 261 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47459.1 1.3e-56 100.0 SRSF12 CCDS30630.1 4.3e-24 56.6 SRSF10 CCDS53282.1 7e-24 55.1 SRSF10 CCDS30629.1 1e-20 65.2 SRSF10 CCDS53283.1 1.5e-20 68.2 SRSF10 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 12 81 PF00076 RNA recognition motif domain HMMSmart IPR000504 11 84 SM00360 RNA recognition motif domain ProfileScan IPR000504 10 88 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_473357 262 605221 56.6 100.0 NP_001177934 261 605221 55.1 99.6 NP_001287866 217 605221 63.2 80.8 NP_003007 221 600813 41.4 86.6 NP_001182356 221 600813 41.4 86.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0673 Download

>KIEE0673  783 bp
ATGTCTCGCTACACGAGGCCCCCCAACACCTCCCTGTTCATCAGGAACGTCGCGGACGCC
ACCAGGCCTGAGGACTTGCGCCGTGAGTTTGGTCGATATGGCCCTATAGTAGACGTTTAC
ATTCCACTTGACTTCTACACTCGCCGCCCAAGAGGATTTGCTTATGTTCAATTTGAAGAT
GTTCGAGATGCTGAAGATGCTCTTTATAACCTCAATAGAAAGTGGGTATGTGGCCGTCAG
ATTGAAATACAGTTTGCACAAGGTGATCGCAAAACACCAGGCCAAATGAAATCAAAAGAA
CGTCATCCTTGTTCTCCAAGTGATCACAGGAGATCAAGAAGCCCCAGCCAAAGAAGAACT
CGAAGTAGAAGTTCTTCATGGGGAAGAAATAGGAGGCGGTCAGACAGCCTTAAAGAGTCT
CGACACAGGCGATTTTCTTATAGCCAGTCTAAATCTCGTTCCAAATCATTACCAAGGCGG
TCTACCTCAGCAAGGCAGTCAAGAACTCCAAGAAGGAATTTTGGCTCTAGAGGACGGTCA
AGGTCCAAGTCCTTACAAAAGAGGTCCAAGTCAATAGGAAAATCACAGTCAAGTTCACCT
CAAAAGCAGACTAGCTCAGGAACAAAATCAAGATCACATGGAAGACATTCTGACTCAATA
GCAAGATCCCCGTGTAAATCTCCCAAAGGGTATACCAATTCTGAAACTAAAGTACAAACA
GCAAAGCATTCTCATTTTCGGTCACATTCCAGATCTCGAAGTTATCGTCATAAAAACAGT
TGG

ORF Protein

Cloned ORF protein sequence for pF1KE0673 Download

>KIEE0673  261 aa
MSRYTRPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFED
VRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHPCSPSDHRRSRSPSQRRT
RSRSSSWGRNRRRSDSLKESRHRRFSYSQSKSRSKSLPRRSTSARQSRTPRRNFGSRGRS
RSKSLQKRSKSIGKSQSSSPQKQTSSGTKSRSHGRHSDSIARSPCKSPKGYTNSETKVQT
AKHSHFRSHSRSRSYRHKNSW

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0673 Download

>pF1KE0673  3896 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCTCGCTAC
ACGAGGCCCCCCAACACCTCCCTGTTCATCAGGAACGTCGCGGACGCCACCAGGCCTGAG
GACTTGCGCCGTGAGTTTGGTCGATATGGCCCTATAGTAGACGTTTACATTCCACTTGAC
TTCTACACTCGCCGCCCAAGAGGATTTGCTTATGTTCAATTTGAAGATGTTCGAGATGCT
GAAGATGCTCTTTATAACCTCAATAGAAAGTGGGTATGTGGCCGTCAGATTGAAATACAG
TTTGCACAAGGTGATCGCAAAACACCAGGCCAAATGAAATCAAAAGAACGTCATCCTTGT
TCTCCAAGTGATCACAGGAGATCAAGAAGCCCCAGCCAAAGAAGAACTCGAAGTAGAAGT
TCTTCATGGGGAAGAAATAGGAGGCGGTCAGACAGCCTTAAAGAGTCTCGACACAGGCGA
TTTTCTTATAGCCAGTCTAAATCTCGTTCCAAATCATTACCAAGGCGGTCTACCTCAGCA
AGGCAGTCAAGAACTCCAAGAAGGAATTTTGGCTCTAGAGGACGGTCAAGGTCCAAGTCC
TTACAAAAGAGGTCCAAGTCAATAGGAAAATCACAGTCAAGTTCACCTCAAAAGCAGACT
AGCTCAGGAACAAAATCAAGATCACATGGAAGACATTCTGACTCAATAGCAAGATCCCCG
TGTAAATCTCCCAAAGGGTATACCAATTCTGAAACTAAAGTACAAACAGCAAAGCATTCT
CATTTTCGGTCACATTCCAGATCTCGAAGTTATCGTCATAAAAACAGTTGGGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT