RBMXL2 ORF clone FXC03891

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Flexi ORF Clone FXC03891

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Clone info.

Species

human

Clone Name

pF1KE0664 Sequence (with vector) Restriction Map

Product ID

FXC03891

HaloTag Clone PID

FHC03891

ORF Sequence

DNA sequence (1176 bp)
Protein sequence (392 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527964]

Gene

KIEE0664

Symbol

RBMXL2

Alias : HNRNPG-T, HNRNPGT, HNRPGT

Description

RNA binding motif protein, X-linked-like 2

Original Clone ID

cs02164

Features of the cloned ORF sequence

Description

Length: 1176 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 392 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7777.1 2.9e-72 99.5 RBMXL2 CCDS14661.1 1e-48 73.2 RBMX CCDS716.1 2e-44 68.9 RBMXL1 CCDS55478.1 6.5e-22 55.4 RBMXL3 CCDS83521.1 8e-20 46.8 RBMY1D The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 10 80 PF00076 RNA recognition motif domain IPR012604 173 217 PF08081 RBM1CTR HMMSmart IPR003954 9 82 SM00361 RNA recognition motif domain IPR000504 9 82 SM00360 RNA recognition motif domain ProfileScan IPR000504 8 86 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055284 392 605444 99.5 100.0 NP_002130 391 300199,300238 73.2 100.0 XP_011529740 385 400006,415000 47.6 100.0 NP_001307873 459 400006,415000 46.8 94.4 XP_011529739 422 400006,415000 47.1 93.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0664 Download

>KIEE0664  1176 bp
ATGGTTGAAGCGGATCGCCCGGGGAAGCTGTTCATTGGGGGCCTCAACCTCGAAACCGAC
GAGAAAGCCCTCGAAGCCGAGTTTGGCAAGTATGGCCGCATCGTCGAGGTGCTCCTGATG
AAAGACCGAGAAACCAACAAGTCGAGGGGCTTCGCGTTCGTCACCTTTGAAAGCCCCGCA
GACGCCAAGGCCGCCGTCAGAGACATGAACGGCAAGTCCCTGGATGGTAAGGCCATCAAG
GTGGCCCAGGCCACCAAACCGGCGTTCGAGAGCAGCCGGCGGGGCCCGCCGCCTCCCCGC
AGCCGCGGTCGCCCGAGGTTCCTGCGCGGAACCCGCGGGGGTGGCGGCGGCCCGCGGCGT
TCCCCATCCCGGGGCGGGCCCGATGATGACGGCGGCTACGCGGCGGATTTCGACCTGCGG
CCCTCCAGGGCCCCGATGCCCATGAAGCGTGGGCCGCCGCCGCGCAGGGTCGGCCCACCC
CCCAAGAGGGCCGCGCCGTCGGGCCCGGCTCGCAGCAGCGGCGGTGGAATGCGCGGGAGG
GCCCTGGCCGTGCGGGGGCGAGACGGCTACTCAGGCCCACCGCGCCGGGAGCCGCTGCCC
CCGCGCCGCGACCCCTACCTGGGCCCGCGGGATGAGGGCTACTCGTCCAGAGACGGCTAC
TCGAGCCGAGACTACCGCGAACCCCGGGGTTTTGCCCCCTCGCCCGGAGAGTACACCCAC
CGCGATTACGGCCACTCCAGTGTCCGGGACGACTGTCCCTTGAGAGGCTACAGCGACCGA
GACGGCTACGGAGGTCGCGACCGTGACTACGGGGATCATCTGAGCAGAGGCTCCCATCGA
GAGCCCTTTGAGAGCTACGGAGAGCTGCGCGGCGCCGCCCCAGGACGGGGGACACCGCCA
TCTTACGGAGGAGGAGGCCGCTACGAGGAGTACCGGGGCTACTCACCCGATGCCTACAGC
GGCGGCCGCGACAGTTACAGCAGCAGTTATGGCCGGAGCGACCGCTACTCGAGGGGCCGA
CACCGGGTGGGCAGACCAGATCGTGGGCTCTCTCTGTCCATGGAAAGGGGCTGCCCTCCC
CAGCGTGATTCTTACAGCCGGTCAGGCTGCAGGGTGCCCAGGGGCGGAGGCCGTCTAGGA
GGCCGCTTGGAGAGAGGAGGAGGCCGGAGCAGATAC

ORF Protein

Cloned ORF protein sequence for pF1KE0664 Download

>KIEE0664  392 aa
MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKAAVRDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPRR
SPSRGGPDDDGGYAADFDLRPSRAPMPMKRGPPPRRVGPPPKRAAPSGPARSSGGGMRGR
ALAVRGRDGYSGPPRREPLPPRRDPYLGPRDEGYSSRDGYSSRDYREPRGFAPSPGEYTH
RDYGHSSVRDDCPLRGYSDRDGYGGRDRDYGDHLSRGSHREPFESYGELRGAAPGRGTPP
SYGGGGRYEEYRGYSPDAYSGGRDSYSSSYGRSDRYSRGRHRVGRPDRGLSLSMERGCPP
QRDSYSRSGCRVPRGGGRLGGRLERGGGRSRY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0664 Download

>pF1KE0664  4289 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTTGAAGCG
GATCGCCCGGGGAAGCTGTTCATTGGGGGCCTCAACCTCGAAACCGACGAGAAAGCCCTC
GAAGCCGAGTTTGGCAAGTATGGCCGCATCGTCGAGGTGCTCCTGATGAAAGACCGAGAA
ACCAACAAGTCGAGGGGCTTCGCGTTCGTCACCTTTGAAAGCCCCGCAGACGCCAAGGCC
GCCGTCAGAGACATGAACGGCAAGTCCCTGGATGGTAAGGCCATCAAGGTGGCCCAGGCC
ACCAAACCGGCGTTCGAGAGCAGCCGGCGGGGCCCGCCGCCTCCCCGCAGCCGCGGTCGC
CCGAGGTTCCTGCGCGGAACCCGCGGGGGTGGCGGCGGCCCGCGGCGTTCCCCATCCCGG
GGCGGGCCCGATGATGACGGCGGCTACGCGGCGGATTTCGACCTGCGGCCCTCCAGGGCC
CCGATGCCCATGAAGCGTGGGCCGCCGCCGCGCAGGGTCGGCCCACCCCCCAAGAGGGCC
GCGCCGTCGGGCCCGGCTCGCAGCAGCGGCGGTGGAATGCGCGGGAGGGCCCTGGCCGTG
CGGGGGCGAGACGGCTACTCAGGCCCACCGCGCCGGGAGCCGCTGCCCCCGCGCCGCGAC
CCCTACCTGGGCCCGCGGGATGAGGGCTACTCGTCCAGAGACGGCTACTCGAGCCGAGAC
TACCGCGAACCCCGGGGTTTTGCCCCCTCGCCCGGAGAGTACACCCACCGCGATTACGGC
CACTCCAGTGTCCGGGACGACTGTCCCTTGAGAGGCTACAGCGACCGAGACGGCTACGGA
GGTCGCGACCGTGACTACGGGGATCATCTGAGCAGAGGCTCCCATCGAGAGCCCTTTGAG
AGCTACGGAGAGCTGCGCGGCGCCGCCCCAGGACGGGGGACACCGCCATCTTACGGAGGA
GGAGGCCGCTACGAGGAGTACCGGGGCTACTCACCCGATGCCTACAGCGGCGGCCGCGAC
AGTTACAGCAGCAGTTATGGCCGGAGCGACCGCTACTCGAGGGGCCGACACCGGGTGGGC
AGACCAGATCGTGGGCTCTCTCTGTCCATGGAAAGGGGCTGCCCTCCCCAGCGTGATTCT
TACAGCCGGTCAGGCTGCAGGGTGCCCAGGGGCGGAGGCCGTCTAGGAGGCCGCTTGGAG
AGAGGAGGAGGCCGGAGCAGATACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGC
GGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGG
CCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCG
CCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGG
ACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGAC
CCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCA
TAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGT
GCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTC
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAG
AGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACAC
TAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGT
TGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAA
GCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGG
GTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAA
AAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT