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SpecieshumanProduct IDFXC03627Cloning SiteSgfI-PmeIGeneKIBB6159SymbolZNF343
Alias : dJ734P14.5Descriptionzinc finger protein 343, transcript variant 1Original Clone IDcs00759
Length: 1797 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 599 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS13028.1 2.1e-123 100.0 ZNF343 CCDS74692.1 3.5e-105 100.0 ZNF343 CCDS74693.1 4.1e-103 93.5 ZNF343 CCDS43307.1 6e-57 58.3 PRDM9 CCDS63235.1 3.8e-54 56.3 ZNF133
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 62 101 PF01352 Krueppel-associated box IPR007087 269 291 PF00096 Zinc finger IPR007087 297 319 PF00096 Zinc finger IPR007087 353 375 PF00096 Zinc finger IPR007087 381 403 PF00096 Zinc finger IPR007087 409 431 PF00096 Zinc finger IPR007087 465 487 PF00096 Zinc finger IPR007087 493 515 PF00096 Zinc finger IPR007087 549 571 PF00096 Zinc finger IPR007087 577 599 PF00096 Zinc finger HMMSmart IPR001909 62 121 SM00349 Krueppel-associated box IPR015880 269 291 SM00355 Zinc finger IPR015880 297 319 SM00355 Zinc finger IPR015880 325 347 SM00355 Zinc finger IPR015880 353 375 SM00355 Zinc finger IPR015880 381 403 SM00355 Zinc finger IPR015880 409 431 SM00355 Zinc finger IPR015880 437 459 SM00355 Zinc finger IPR015880 465 487 SM00355 Zinc finger IPR015880 493 515 SM00355 Zinc finger IPR015880 521 543 SM00355 Zinc finger IPR015880 549 571 SM00355 Zinc finger IPR015880 577 599 SM00355 Zinc finger ProfileScan IPR001909 62 139 PS50805 Krueppel-associated box IPR007087 269 296 PS50157 Zinc finger IPR007087 297 324 PS50157 Zinc finger IPR007087 325 352 PS50157 Zinc finger IPR007087 353 380 PS50157 Zinc finger IPR007087 381 408 PS50157 Zinc finger IPR007087 409 436 PS50157 Zinc finger IPR007087 437 464 PS50157 Zinc finger IPR007087 465 492 PS50157 Zinc finger IPR007087 493 520 PS50157 Zinc finger IPR007087 521 548 PS50157 Zinc finger IPR007087 549 576 PS50157 Zinc finger IPR007087 577 599 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001297143 894 609760 58.3 84.1 NP_064612 894 609760 58.3 84.1 NP_001269925 671 604075 52.6 89.8 NP_001269932 591 604075 56.3 83.3 XP_016883546 591 604075 56.3 83.3 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB6159 Download>KIBB6159 1797 bp ATGATGTTGCCTTATCCTTCAGCACTGGGAGATCAATACTGGGAAGAGATTTTGCTTCCA AAGAATGGGGAAAATGTAGAGACTATGAAGAAATTGACCCAAAATCATAAAGCGAAAGGC TTGCCTTCTAATGATACTGACTGCCCCCAGAAAAAGGAGGGAAAGGCCCAAATAGTGGTA CCAGTTACATTCAGGGATGTGACTGTGATCTTCACAGAAGCAGAATGGAAGAGACTGAGT CCAGAGCAGAGGAATCTATACAAAGAAGTGATGCTGGAGAATTACAGGAATCTTCTCTCA TTGGCAGAACCAAAGCCAGAAATCTACACTTGTTCCTCCTGCCTTCTGGCCTTCTCCTGT CAGCAGTTCCTCAGTCAACATGTACTTCAGATCTTCCTGGGCTTATGTGCAGAAAATCAC TTCCATCCAGGGAATTCTAGCCCAGGGCATTGGAAACAGCAGGGGCAGCAGTATTCCCAT GTAAGCTGTTGGTTTGAAAATGCAGAAGGTCAGGAGAGAGGAGGTGGCTCCAAACCCTGG TCTGCAAGGACAGAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGACAG TCAGCAAGTCCTAGAAAAGGCAACATGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGA CCAAACCCTGTGCAGCTAGACAAAGGCTTGAAGGAATTAGAAACCTTGAGATTTGGAGCA ATCAACTGTAGAGAGTATGAACCGGACCATAACCTGGAATCAAACTTTATTACAAACCCG AGGACCCTCTTAGGGAAGAAGCCCTACATTTGCAGTGATTGTGGGCGAAGCTTTAAAGAT AGATCAACCCTCATCAGACACCATCGTATACACTCGATGGAGAAGCCTTATGTGTGCAGT GAGTGCGGGCGAGGTTTTAGCCAGAAGTCCAACCTCAGCAGACACCAGAGAACACATTCA GAAGAGAAGCCTTATTTGTGCAGGGAGTGTGGGCAAAGCTTTAGAAGTAAGTCCATCCTC AATAGACATCAGTGGACTCACTCAGAGGAGAAGCCCTATGTTTGCAGCGAGTGTGGGCGA GGCTTTAGCGAGAAGTCATCCTTCATCAGACACCAGAGGACACACTCCGGTGAGAAACCC TATGTGTGCCTGGAGTGTGGACGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACACCAG AGGATACACTCAGGGGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTAGCCAG AACTCAGATCTCATCAAACACCAGAGGACACACTTGGATGAGAAGCCTTATGTTTGCAGG GAGTGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATCATACACGAGCGGACGCACTCT GGAGAGAAGCCTTATGTGTGTGGTGAGTGTGGCCGAGGCTTTAGTCGGAAATCACTCCTC CTTGTCCACCAGAGGACACACTCAGGGGAGAAGCATTATGTCTGCAGGGAGTGTAGGCGA GGTTTTAGCCAGAAGTCAAATCTCATCAGACACCAGAGGACGCACTCAAATGAGAAGCCT TATATTTGCAGGGAATGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATTGTACATGAG AGGACACACTCAGGAGAGAAGCCTTACGTGTGCAGTGAGTGTGGCCGAGGCTTTAGCCGG AAATCACTCCTCCTTGTCCACCAGAGGACACACTCAGGGGAGAAGCATTATGTTTGTAGG GAGTGTGGGCGAGGCTTTAGTCATAAGTCAAATCTCATCAGACACCAGAGGACACAC
Cloned ORF protein sequence for pF1KB6159 Download>KIBB6159 599 aa MMLPYPSALGDQYWEEILLPKNGENVETMKKLTQNHKAKGLPSNDTDCPQKKEGKAQIVV PVTFRDVTVIFTEAEWKRLSPEQRNLYKEVMLENYRNLLSLAEPKPEIYTCSSCLLAFSC QQFLSQHVLQIFLGLCAENHFHPGNSSPGHWKQQGQQYSHVSCWFENAEGQERGGGSKPW SARTEERETSRAFPSPLQRQSASPRKGNMVVETEPSSAQRPNPVQLDKGLKELETLRFGA INCREYEPDHNLESNFITNPRTLLGKKPYICSDCGRSFKDRSTLIRHHRIHSMEKPYVCS ECGRGFSQKSNLSRHQRTHSEEKPYLCRECGQSFRSKSILNRHQWTHSEEKPYVCSECGR GFSEKSSFIRHQRTHSGEKPYVCLECGRSFCDKSTLRKHQRIHSGEKPYVCRECGRGFSQ NSDLIKHQRTHLDEKPYVCRECGRGFCDKSTLIIHERTHSGEKPYVCGECGRGFSRKSLL LVHQRTHSGEKHYVCRECRRGFSQKSNLIRHQRTHSNEKPYICRECGRGFCDKSTLIVHE RTHSGEKPYVCSECGRGFSRKSLLLVHQRTHSGEKHYVCRECGRGFSHKSNLIRHQRTH
Nucleotide Sequence (with vector) for pF1KB6159 Download>pF1KB6159 4910 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGTTGCCT TATCCTTCAGCACTGGGAGATCAATACTGGGAAGAGATTTTGCTTCCAAAGAATGGGGAA AATGTAGAGACTATGAAGAAATTGACCCAAAATCATAAAGCGAAAGGCTTGCCTTCTAAT GATACTGACTGCCCCCAGAAAAAGGAGGGAAAGGCCCAAATAGTGGTACCAGTTACATTC AGGGATGTGACTGTGATCTTCACAGAAGCAGAATGGAAGAGACTGAGTCCAGAGCAGAGG AATCTATACAAAGAAGTGATGCTGGAGAATTACAGGAATCTTCTCTCATTGGCAGAACCA AAGCCAGAAATCTACACTTGTTCCTCCTGCCTTCTGGCCTTCTCCTGTCAGCAGTTCCTC AGTCAACATGTACTTCAGATCTTCCTGGGCTTATGTGCAGAAAATCACTTCCATCCAGGG AATTCTAGCCCAGGGCATTGGAAACAGCAGGGGCAGCAGTATTCCCATGTAAGCTGTTGG TTTGAAAATGCAGAAGGTCAGGAGAGAGGAGGTGGCTCCAAACCCTGGTCTGCAAGGACA GAGGAGAGAGAAACCTCAAGGGCATTCCCCAGCCCACTCCAAAGACAGTCAGCAAGTCCT AGAAAAGGCAACATGGTGGTAGAAACAGAGCCCAGCTCAGCCCAAAGACCAAACCCTGTG CAGCTAGACAAAGGCTTGAAGGAATTAGAAACCTTGAGATTTGGAGCAATCAACTGTAGA GAGTATGAACCGGACCATAACCTGGAATCAAACTTTATTACAAACCCGAGGACCCTCTTA GGGAAGAAGCCCTACATTTGCAGTGATTGTGGGCGAAGCTTTAAAGATAGATCAACCCTC ATCAGACACCATCGTATACACTCGATGGAGAAGCCTTATGTGTGCAGTGAGTGCGGGCGA GGTTTTAGCCAGAAGTCCAACCTCAGCAGACACCAGAGAACACATTCAGAAGAGAAGCCT TATTTGTGCAGGGAGTGTGGGCAAAGCTTTAGAAGTAAGTCCATCCTCAATAGACATCAG TGGACTCACTCAGAGGAGAAGCCCTATGTTTGCAGCGAGTGTGGGCGAGGCTTTAGCGAG AAGTCATCCTTCATCAGACACCAGAGGACACACTCCGGTGAGAAACCCTATGTGTGCCTG GAGTGTGGACGAAGCTTTTGTGATAAGTCAACCCTCAGAAAACACCAGAGGATACACTCA GGGGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGAGGCTTTAGCCAGAACTCAGATCTC ATCAAACACCAGAGGACACACTTGGATGAGAAGCCTTATGTTTGCAGGGAGTGTGGGCGA GGCTTTTGTGACAAGTCAACCCTCATCATACACGAGCGGACGCACTCTGGAGAGAAGCCT TATGTGTGTGGTGAGTGTGGCCGAGGCTTTAGTCGGAAATCACTCCTCCTTGTCCACCAG AGGACACACTCAGGGGAGAAGCATTATGTCTGCAGGGAGTGTAGGCGAGGTTTTAGCCAG AAGTCAAATCTCATCAGACACCAGAGGACGCACTCAAATGAGAAGCCTTATATTTGCAGG GAATGTGGGCGAGGCTTTTGTGACAAGTCAACCCTCATTGTACATGAGAGGACACACTCA GGAGAGAAGCCTTACGTGTGCAGTGAGTGTGGCCGAGGCTTTAGCCGGAAATCACTCCTC CTTGTCCACCAGAGGACACACTCAGGGGAGAAGCATTATGTTTGTAGGGAGTGTGGGCGA GGCTTTAGTCATAAGTCAAATCTCATCAGACACCAGAGGACACACGTTTAAACGAATTCG AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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