SUDS3 ORF clone FXC03386

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Flexi ORF Clone FXC03386

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Clone info.

Species

human

Clone Name

pF1KF0052 Sequence (with vector) Restriction Map

Product ID

FXC03386

HaloTag Clone PID

FHC03386

ORF Sequence

DNA sequence (984 bp)
Protein sequence (328 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464255]

Gene

FLJ00052

Symbol

SUDS3

Alias : SAP45, SDS3

Description

suppressor of defective silencing 3 homolog (S. cerevisiae)

Original Clone ID

as00052

Features of the cloned ORF sequence

Description

Length: 984 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 328 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS44993.1 1.3e-73 100.0 SUDS3 CCDS32066.1 1.3e-11 29.0 BRMS1L The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013907 61 222 PF08598 Sds3-like
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071936 328 608250 100.0 100.0 XP_011536973 407 608250 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KF0052 Download

>FLJ00052  984 bp
ATGAGTGCCGCGGGGCTGCTGGCCCCGGCCCCGGCCCAGGCTGGAGCGCCGCCGGCCCCC
GAGTACTACCCCGAGGAGGATGAAGAGCTGGAGAGCGCCGAGGACGACGAGCGCAGCTGT
CGGGGCCGCGAGTCGGACGAAGACACTGAGGATGCTAGTGAAACTGACCTGGCAAAGCAT
GATGAAGAAGACTATGTAGAAATGAAGGAACAGATGTATCAGGACAAACTGGCTTCTCTC
AAGAGGCAGTTGCAACAACTGCAAGAAGGTACATTACAGGAATATCAGAAGAGAATGAAA
AAACTAGATCAGCAGTACAAAGAGAGGATACGGAATGCAGAACTCTTCCTCCAGCTGGAA
ACTGAACAAGTGGAACGAAATTACATTAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAA
GACAAGAAGGTTGAGCTGAAAGAGAACCTGATTGCTGAGCTAGAAGAAAAGAAGAAAATG
ATTGAAAATGAAAAGCTGACAATGGAACTGACTGGAGATTCTATGGAGGTGAAACCTATC
ATGACCAGAAAGTTGCGGAGGCGACCAAATGATCCCGTCCCCATCCCAGACAAGAGGAGG
AAACCTGCTCCAGCCCAGCTAAACTATTTGTTAACAGATGAACAGATCATGGAGGATCTG
AGAACATTAAATAAGCTTAAGTCACCCAAGAGACCAGCATCTCCATCCTCTCCTGAGCAC
TTGCCTGCAACACCCGCGGAATCTCCAGCCCAGAGGTTCGAAGCTCGGATAGAAGATGGC
AAACTGTACTATGACAAAAGATGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAG
GACAACCAGAAACTGAGCTGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGG
AAGACAAGTGACAGCACCAAGATGAGGATCTACCTGGGCCAGCTTCAGCGCGGGCTCTTC
GTGATCCGCCGGCGCTCAGCTGCT

ORF Protein

Cloned ORF protein sequence for pF1KF0052 Download

>FLJ00052  328 aa
MSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKH
DEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLE
TEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPI
MTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEH
LPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVR
KTSDSTKMRIYLGQLQRGLFVIRRRSAA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KF0052 Download

>pF1KF0052  4097 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGTGCCGCG
GGGCTGCTGGCCCCGGCCCCGGCCCAGGCTGGAGCGCCGCCGGCCCCCGAGTACTACCCC
GAGGAGGATGAAGAGCTGGAGAGCGCCGAGGACGACGAGCGCAGCTGTCGGGGCCGCGAG
TCGGACGAAGACACTGAGGATGCTAGTGAAACTGACCTGGCAAAGCATGATGAAGAAGAC
TATGTAGAAATGAAGGAACAGATGTATCAGGACAAACTGGCTTCTCTCAAGAGGCAGTTG
CAACAACTGCAAGAAGGTACATTACAGGAATATCAGAAGAGAATGAAAAAACTAGATCAG
CAGTACAAAGAGAGGATACGGAATGCAGAACTCTTCCTCCAGCTGGAAACTGAACAAGTG
GAACGAAATTACATTAAAGAAAAGAAGGCAGCAGTGAAAGAATTTGAAGACAAGAAGGTT
GAGCTGAAAGAGAACCTGATTGCTGAGCTAGAAGAAAAGAAGAAAATGATTGAAAATGAA
AAGCTGACAATGGAACTGACTGGAGATTCTATGGAGGTGAAACCTATCATGACCAGAAAG
TTGCGGAGGCGACCAAATGATCCCGTCCCCATCCCAGACAAGAGGAGGAAACCTGCTCCA
GCCCAGCTAAACTATTTGTTAACAGATGAACAGATCATGGAGGATCTGAGAACATTAAAT
AAGCTTAAGTCACCCAAGAGACCAGCATCTCCATCCTCTCCTGAGCACTTGCCTGCAACA
CCCGCGGAATCTCCAGCCCAGAGGTTCGAAGCTCGGATAGAAGATGGCAAACTGTACTAT
GACAAAAGATGGTACCACAAGAGCCAGGCCATCTATCTGGAGTCAAAGGACAACCAGAAA
CTGAGCTGCGTGATCAGTTCTGTAGGAGCCAATGAGATCTGGGTGAGGAAGACAAGTGAC
AGCACCAAGATGAGGATCTACCTGGGCCAGCTTCAGCGCGGGCTCTTCGTGATCCGCCGG
CGCTCAGCTGCTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT