SP8 ORF clone FXC03373

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC03373

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB9871 Sequence (with vector) Restriction Map

Product ID

FXC03373

HaloTag Clone PID

FHC03373

ORF Sequence

DNA sequence (1470 bp)
Protein sequence (490 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464710]

Gene

KIBB9871

Symbol

SP8

Alias : BTD

Description

Sp8 transcription factor, transcript variant 2

Original Clone ID

cp00440

Features of the cloned ORF sequence

Description

Length: 1470 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 490 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5372.1 1.9e-88 100.0 SP8 CCDS43555.1 1.9e-88 100.0 SP8 CCDS46453.1 9.8e-37 58.7 SP9 CCDS73475.1 2.2e-17 40.6 SP7 CCDS44897.1 2.3e-17 40.5 SP7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 386 410 PF00096 Zinc finger HMMSmart IPR015880 356 380 SM00355 Zinc finger IPR015880 386 410 SM00355 Zinc finger IPR015880 416 438 SM00355 Zinc finger ProfileScan IPR007087 356 385 PS50157 Zinc finger IPR007087 386 415 PS50157 Zinc finger IPR007087 416 440 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_945194 490 608306 100.0 100.0 NP_874359 508 608306 100.0 100.0 NP_001287766 413 606633,613849 40.6 85.5 XP_011536202 413 606633,613849 40.6 85.5 NP_690599 431 606633,613849 40.5 87.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9871 Download

>KIBB9871  1470 bp
ATGCTTGCCGCTACCTGTAATAAGATAGGCAGCCCCAGCCCGTCTCCCTCCTCCCTCTCG
GACAGCTCTTCTTCCTTCGGCAAAGGCTTCCACCCCTGGAAACGCTCCTCGTCCTCTTCT
TCCGCCAGCTGCAACGTAGTGGGTTCCAGTCTCTCAAGCTTCGGCGTGTCCGGGGCCTCC
AGGAACGGCGGCTCGTCCTCGGCGGCTGCGGCGGCCGCGGCAGCAGCCGCGGCTGCCGCG
GCCCTGGTGTCCGACTCGTTCAGCTGCGGCGGCTCGCCTGGCTCCAGCGCCTTCTCCCTC
ACCTCCAGCAGCGCCGCAGCCGCCGCCGCCGCCGCCGCAGCCGCCGCCTCCAGCTCGCCC
TTCGCCAACGACTACTCTGTTTTCCAGGCCCCCGGAGTTTCCGGGGGCAGCGGCGGCGGC
GGCGGGGGCGGCGGCGGCGGCTCCTCCGCGCACTCGCAGGACGGCTCCCACCAGCCGGTG
TTCATCTCCAAGGTGCACACCTCTGTGGACGGGCTGCAGGGCATCTACCCGCGGGTGGGC
ATGGCGCACCCGTACGAGTCGTGGTTTAAGCCCTCGCACCCGGGCCTGGGTGCTGCGGGC
GAGGTGGGCTCGGCCGGCGCCTCCAGCTGGTGGGACGTGGGGGCCGGCTGGATCGACGTG
CAGAACCCGAACAGCGCGGCTGCGCTGCCCGGCTCGCTGCACCCTGCCGCCGGGGGGCTC
CAAACCTCGCTGCACTCGCCGCTCGGAGGCTACAACTCGGATTACTCAGGCCTGAGTCAC
TCGGCCTTCAGCAGCGGCGCCTCCTCGCACCTGCTCAGCCCCGCCGGGCAGCACCTCATG
GACGGCTTCAAGCCAGTGCTACCCGGCTCCTACCCGGACTCGGCCCCGTCGCCGCTGGCC
GGCGCGGGGGGCTCCATGTTGAGCGCTGGGCCTTCGGCGCCGCTGGGGGGCTCCCCGCGC
TCCTCAGCTCGCCGCTACTCCGGCCGCGCCACCTGCGACTGCCCCAACTGCCAGGAGGCA
GAGCGGCTGGGCCCTGCCGGGGCGAGCTTGCGGCGCAAGGGCCTGCACAGCTGCCACATC
CCGGGCTGCGGCAAGGTGTACGGCAAGACTTCGCACCTCAAGGCGCACCTGCGCTGGCAC
ACGGGCGAGCGGCCCTTCGTGTGCAACTGGCTTTTCTGCGGCAAGCGCTTCACGCGCTCC
GACGAGCTGCAGCGGCACCTGCGGACCCACACCGGCGAGAAGCGCTTCGCCTGTCCAGTT
TGCAACAAGCGCTTCATGCGCAGCGACCACCTCAGCAAGCACGTGAAGACGCACAGTGGC
GGCGGCGGCGGCGGCGGCTCGGCGGGCTCGGGCAGCGGCGGCAAGAAGGGCAGCGACACC
GACAGCGAGCACAGCGCCGCGGGCAGCCCGCCCTGCCACTCCCCAGAGCTGCTGCAGCCC
CCCGAGCCCGGGCACCGCAACGGCCTAGAG

ORF Protein

Cloned ORF protein sequence for pF1KB9871 Download

>KIBB9871  490 aa
MLAATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGAS
RNGGSSSAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSSSAAAAAAAAAAAASSSP
FANDYSVFQAPGVSGGSGGGGGGGGGGSSAHSQDGSHQPVFISKVHTSVDGLQGIYPRVG
MAHPYESWFKPSHPGLGAAGEVGSAGASSWWDVGAGWIDVQNPNSAAALPGSLHPAAGGL
QTSLHSPLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLA
GAGGSMLSAGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHI
PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV
CNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQP
PEPGHRNGLE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9871 Download

>pF1KB9871  4583 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTTGCCGCT
ACCTGTAATAAGATAGGCAGCCCCAGCCCGTCTCCCTCCTCCCTCTCGGACAGCTCTTCT
TCCTTCGGCAAAGGCTTCCACCCCTGGAAACGCTCCTCGTCCTCTTCTTCCGCCAGCTGC
AACGTAGTGGGTTCCAGTCTCTCAAGCTTCGGCGTGTCCGGGGCCTCCAGGAACGGCGGC
TCGTCCTCGGCGGCTGCGGCGGCCGCGGCAGCAGCCGCGGCTGCCGCGGCCCTGGTGTCC
GACTCGTTCAGCTGCGGCGGCTCGCCTGGCTCCAGCGCCTTCTCCCTCACCTCCAGCAGC
GCCGCAGCCGCCGCCGCCGCCGCCGCAGCCGCCGCCTCCAGCTCGCCCTTCGCCAACGAC
TACTCTGTTTTCCAGGCCCCCGGAGTTTCCGGGGGCAGCGGCGGCGGCGGCGGGGGCGGC
GGCGGCGGCTCCTCCGCGCACTCGCAGGACGGCTCCCACCAGCCGGTGTTCATCTCCAAG
GTGCACACCTCTGTGGACGGGCTGCAGGGCATCTACCCGCGGGTGGGCATGGCGCACCCG
TACGAGTCGTGGTTTAAGCCCTCGCACCCGGGCCTGGGTGCTGCGGGCGAGGTGGGCTCG
GCCGGCGCCTCCAGCTGGTGGGACGTGGGGGCCGGCTGGATCGACGTGCAGAACCCGAAC
AGCGCGGCTGCGCTGCCCGGCTCGCTGCACCCTGCCGCCGGGGGGCTCCAAACCTCGCTG
CACTCGCCGCTCGGAGGCTACAACTCGGATTACTCAGGCCTGAGTCACTCGGCCTTCAGC
AGCGGCGCCTCCTCGCACCTGCTCAGCCCCGCCGGGCAGCACCTCATGGACGGCTTCAAG
CCAGTGCTACCCGGCTCCTACCCGGACTCGGCCCCGTCGCCGCTGGCCGGCGCGGGGGGC
TCCATGTTGAGCGCTGGGCCTTCGGCGCCGCTGGGGGGCTCCCCGCGCTCCTCAGCTCGC
CGCTACTCCGGCCGCGCCACCTGCGACTGCCCCAACTGCCAGGAGGCAGAGCGGCTGGGC
CCTGCCGGGGCGAGCTTGCGGCGCAAGGGCCTGCACAGCTGCCACATCCCGGGCTGCGGC
AAGGTGTACGGCAAGACTTCGCACCTCAAGGCGCACCTGCGCTGGCACACGGGCGAGCGG
CCCTTCGTGTGCAACTGGCTTTTCTGCGGCAAGCGCTTCACGCGCTCCGACGAGCTGCAG
CGGCACCTGCGGACCCACACCGGCGAGAAGCGCTTCGCCTGTCCAGTTTGCAACAAGCGC
TTCATGCGCAGCGACCACCTCAGCAAGCACGTGAAGACGCACAGTGGCGGCGGCGGCGGC
GGCGGCTCGGCGGGCTCGGGCAGCGGCGGCAAGAAGGGCAGCGACACCGACAGCGAGCAC
AGCGCCGCGGGCAGCCCGCCCTGCCACTCCCCAGAGCTGCTGCAGCCCCCCGAGCCCGGG
CACCGCAACGGCCTAGAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT