NDN ORF clone FXC03337

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Flexi ORF Clone FXC03337

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Clone info.

Species

human

Clone Name

pF1KB9826 Sequence (with vector) Restriction Map

Product ID

FXC03337

HaloTag Clone PID

FHC03337

ORF Sequence

DNA sequence (963 bp)
Protein sequence (321 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464627]

Gene

KIBB9826

Symbol

NDN

Alias : HsT16328, PWCR

Description

necdin, melanoma antigen (MAGE) family member

Original Clone ID

cp00395

Features of the cloned ORF sequence

Description

Length: 963 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 321 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10014.1 2.4e-65 100.0 NDN CCDS14362.1 6.8e-16 42.1 MAGED2 CCDS10023.1 1.6e-15 39.9 NSMCE3 CCDS3269.1 5.5e-15 40.3 MAGEF1 CCDS59527.1 5.5e-15 44.5 TRO The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002190 105 275 PF01454 MAGE protein ProfileScan IPR002190 98 297 PS50838 MAGE protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002478 321 176270,602117 100.0 100.0 NP_619649 304 608243 39.9 80.4 NP_071432 307 609267 40.3 88.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9826 Download

>KIBB9826  963 bp
ATGTCAGAACAAAGTAAGGATCTGAGCGACCCTAACTTTGCAGCCGAGGCCCCCAACTCC
GAGGTGCACAGCAGCCCTGGGGTTTCGGAGGGGGTTCCTCCGTCCGCGACCCTGGCAGAG
CCGCAGAGCCCTCCTCTAGGCCCGACGGCCGCTCCGCAGGCCGCGCCGCCTCCCCAGGCC
CCGAACGACGAGGGCGACCCGAAGGCCCTGCAGCAGGCTGCGGAGGAGGGCCGCGCCCAC
CAGGCCCCGAGCGCGGCCCAGCCGGGCCCGGCACCGCCAGCCCCGGCGCAGCTGGTGCAG
AAGGCGCACGAGCTCATGTGGTACGTGCTGGTCAAGGACCAGAAGAAGATGATCATCTGG
TTTCCAGACATGGTGAAAGATGTCATCGGCAGCTACAAGAAGTGGTGCAGGAGCATCCTC
CGGCGCACCAGCCTCATCCTCGCCCGGGTGTTCGGGCTGCACCTGAGGCTAACCAGCCTG
CACACCATGGAGTTTGCGCTGGTCAAAGCGCTGGAGCCCGAGGAGCTGGACAGGGTGGCG
CTGAGCAACCGCATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTACGTG
AAGGGCCGCGGCGCCAGAGAGAGCGCCGTCTGGAACGTGCTGCGCATCCTGGGGCTGCGG
CCCTGGAAGAAGCACTCCACCTTCGGGGACGTGCGGAAGCTCATCACTGAGGAGTTCGTC
CAAATGAATTACCTGAAGTACCAGCGCGTCCCATACGTGGAGCCGCCCGAATACGAGTTC
TTTTGGGGCTCCCGGGCCAGCCGCGAAATCACCAAGATGCAAATCATGGAGTTCCTGGCC
AGGGTCTTTAAGAAAGACCCCCAGGCCTGGCCCTCCCGATACAGAGAAGCTCTGGAGGAG
GCCAGAGCTCTGCGGGAGGCTAATCCCACTGCCCACTACCCTCGCAGCAGTGTCTCTGAG
GAC

ORF Protein

Cloned ORF protein sequence for pF1KB9826 Download

>KIBB9826  321 aa
MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQA
PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW
FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA
LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV
QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE
ARALREANPTAHYPRSSVSED

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9826 Download

>pF1KB9826  4076 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCAGAACAA
AGTAAGGATCTGAGCGACCCTAACTTTGCAGCCGAGGCCCCCAACTCCGAGGTGCACAGC
AGCCCTGGGGTTTCGGAGGGGGTTCCTCCGTCCGCGACCCTGGCAGAGCCGCAGAGCCCT
CCTCTAGGCCCGACGGCCGCTCCGCAGGCCGCGCCGCCTCCCCAGGCCCCGAACGACGAG
GGCGACCCGAAGGCCCTGCAGCAGGCTGCGGAGGAGGGCCGCGCCCACCAGGCCCCGAGC
GCGGCCCAGCCGGGCCCGGCACCGCCAGCCCCGGCGCAGCTGGTGCAGAAGGCGCACGAG
CTCATGTGGTACGTGCTGGTCAAGGACCAGAAGAAGATGATCATCTGGTTTCCAGACATG
GTGAAAGATGTCATCGGCAGCTACAAGAAGTGGTGCAGGAGCATCCTCCGGCGCACCAGC
CTCATCCTCGCCCGGGTGTTCGGGCTGCACCTGAGGCTAACCAGCCTGCACACCATGGAG
TTTGCGCTGGTCAAAGCGCTGGAGCCCGAGGAGCTGGACAGGGTGGCGCTGAGCAACCGC
ATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTACGTGAAGGGCCGCGGC
GCCAGAGAGAGCGCCGTCTGGAACGTGCTGCGCATCCTGGGGCTGCGGCCCTGGAAGAAG
CACTCCACCTTCGGGGACGTGCGGAAGCTCATCACTGAGGAGTTCGTCCAAATGAATTAC
CTGAAGTACCAGCGCGTCCCATACGTGGAGCCGCCCGAATACGAGTTCTTTTGGGGCTCC
CGGGCCAGCCGCGAAATCACCAAGATGCAAATCATGGAGTTCCTGGCCAGGGTCTTTAAG
AAAGACCCCCAGGCCTGGCCCTCCCGATACAGAGAAGCTCTGGAGGAGGCCAGAGCTCTG
CGGGAGGCTAATCCCACTGCCCACTACCCTCGCAGCAGTGTCTCTGAGGACGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT