RFPL3 ORF clone FXC03157

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Flexi ORF Clone FXC03157

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Clone info.

Species

human

Clone Name

pF1KB9550 Sequence (with vector) Restriction Map

Product ID

FXC03157

HaloTag Clone PID

FHC03157

ORF Sequence

DNA sequence (951 bp)
Protein sequence (317 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463217]

Gene

KIBB9550

Symbol

RFPL3

Alias : RNF120

Description

ret finger protein-like 3, transcript variant 1

Original Clone ID

oc00052

Features of the cloned ORF sequence

Description

Length: 951 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 317 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43011.1 6.2e-120 100.0 RFPL3 CCDS46694.1 2.8e-112 94.0 RFPL2 CCDS13857.2 2.3e-110 91.8 RFPL1 CCDS13904.1 9.1e-109 100.0 RFPL3 CCDS43009.2 5.4e-103 94.5 RFPL2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 123 140 PR01407 Butyrophylin-like IPR003879 140 157 PR01407 Butyrophylin-like IPR003879 162 186 PR01407 Butyrophylin-like IPR003879 192 205 PR01407 Butyrophylin-like IPR003879 236 260 PR01407 Butyrophylin-like IPR003879 267 285 PR01407 Butyrophylin-like HMMPfam IPR022723 65 124 PF11002 RDM domain IPR003877 178 286 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR006574 124 176 SM00589 SPRY-associated IPR018355 177 302 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 40 82 PS50089 Zinc finger IPR001870 107 301 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001092005 317 605970 100.0 100.0 NP_006596 317 605969 94.0 100.0 NP_066306 317 605968 91.8 100.0 NP_006595 288 605970 100.0 90.9 XP_011528134 378 605969 94.5 91.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9550 Download

>KIBB9550  951 bp
ATGAAAAGGTTGTCACTTGTCACAACTAACAGGCTTTCACCTCAAGGAAATTTTCTTCCC
TTGTGTACTTTTCCCCTGGCAGTGGACATGGCTGCACTCTTCCAAGAAGCAAGCAGCTGT
CCCGTCTGCTCAGACTATCTGGAAAAACCAATGTCCCTGGAGTGTGGATGCACCGTCTGC
CTCAAGTGCATCAATTCGCTGCAGAAGGAGCCCCATGGGGAGGATCTGCTTTGCTGTTGC
TGTTCCATGGTCTCTCAGAGGAACAAAATCAGGCCCAATCGGCAGCTAGAGAGGCTGGTT
TCCCACATCAAGGAACTGGAGCCCAAGCTGAAGAAGATTCTACAGATGAACCCAAGGATG
CGGAAGTTCCAAGTGGATATGACCTTGGATGCCGACACAGCCAACAACTTCCTCCTCATT
TCTGACGACCTCAGGAGCGTCCGAAGTGGGCTCATCACACAGAATCGGCAAGACCTTGCC
GAGAGATTTGACGTGTCCGTTTGCATCCTGGGCTCCCCTCGCTTTACCTGTGGCCGCCAC
TACTGGGAGGTGGACGTGGGAACAAGCACAGAATGGGACCTGGGAGTCTGCAGAGAATCT
GTTCACTGCAAAGGGAAGATCCAGCTGACCACAGAGCTTGGATTCTGGACTGTGAGTTTG
AGGGATGGAAGCCGCCTCTCTGCCAGCACGGTGCCGCTGACTTTCCTCTTAGTAGACCGC
AAGTTACAGCGAGTGGGGATTTTTCTGGATATGGGCATGCAGAACGTTTCCTTTTTTGAT
GCTGAAAGTGGTTCCCATGTCTATACATTCAGGAGCGTCTCTGCTGAGGAGCCACTGCGC
CCATTTTTGGCTCCTTCAATTCCACCTAATGGTGATCAAGGTGTCTTGAGCATCTGTCCT
TTGATGAACTCAGGCACTACTGATGCTCCAGTCCGTCCTGGGGAGGCCAAA

ORF Protein

Cloned ORF protein sequence for pF1KB9550 Download

>KIBB9550  317 aa
MKRLSLVTTNRLSPQGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCTVC
LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM
RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH
YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR
KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICP
LMNSGTTDAPVRPGEAK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9550 Download

>pF1KB9550  4064 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAAAGGTTG
TCACTTGTCACAACTAACAGGCTTTCACCTCAAGGAAATTTTCTTCCCTTGTGTACTTTT
CCCCTGGCAGTGGACATGGCTGCACTCTTCCAAGAAGCAAGCAGCTGTCCCGTCTGCTCA
GACTATCTGGAAAAACCAATGTCCCTGGAGTGTGGATGCACCGTCTGCCTCAAGTGCATC
AATTCGCTGCAGAAGGAGCCCCATGGGGAGGATCTGCTTTGCTGTTGCTGTTCCATGGTC
TCTCAGAGGAACAAAATCAGGCCCAATCGGCAGCTAGAGAGGCTGGTTTCCCACATCAAG
GAACTGGAGCCCAAGCTGAAGAAGATTCTACAGATGAACCCAAGGATGCGGAAGTTCCAA
GTGGATATGACCTTGGATGCCGACACAGCCAACAACTTCCTCCTCATTTCTGACGACCTC
AGGAGCGTCCGAAGTGGGCTCATCACACAGAATCGGCAAGACCTTGCCGAGAGATTTGAC
GTGTCCGTTTGCATCCTGGGCTCCCCTCGCTTTACCTGTGGCCGCCACTACTGGGAGGTG
GACGTGGGAACAAGCACAGAATGGGACCTGGGAGTCTGCAGAGAATCTGTTCACTGCAAA
GGGAAGATCCAGCTGACCACAGAGCTTGGATTCTGGACTGTGAGTTTGAGGGATGGAAGC
CGCCTCTCTGCCAGCACGGTGCCGCTGACTTTCCTCTTAGTAGACCGCAAGTTACAGCGA
GTGGGGATTTTTCTGGATATGGGCATGCAGAACGTTTCCTTTTTTGATGCTGAAAGTGGT
TCCCATGTCTATACATTCAGGAGCGTCTCTGCTGAGGAGCCACTGCGCCCATTTTTGGCT
CCTTCAATTCCACCTAATGGTGATCAAGGTGTCTTGAGCATCTGTCCTTTGATGAACTCA
GGCACTACTGATGCTCCAGTCCGTCCTGGGGAGGCCAAAGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTA
TAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGA
GTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCC
TTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGT
TTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGC
GCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTC
TGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGG
CGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCG
GTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGA
ACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGC
GGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGG
GGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCG
ATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTT
TTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCC
TGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT