NKX2-6 ORF clone FXC03107

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Flexi ORF Clone FXC03107

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Clone info.

Species

human

Clone Name

pF1KB8942 Sequence (with vector) Restriction Map

Product ID

FXC03107

HaloTag Clone PID

FHC03107

ORF Sequence

DNA sequence (903 bp)
Protein sequence (301 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464642]

Gene

KIBB8942

Symbol

NKX2-6

Alias : CSX2, CTHM, NKX2F, NKX4-2

Description

NK2 homeobox 6

Original Clone ID

cp00977

Features of the cloned ORF sequence

Description

Length: 903 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 301 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4387.1 1.5e-23 45.2 5 CCDS41558.1 5.1e-21 46.7 3 CCDS13145.1 4.4e-15 40.4 2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 154 165 PR00024 Homeobox IPR020479 169 179 PR00024 Homeobox IPR020479 179 188 PR00024 Homeobox HMMPfam IPR001356 133 189 PF00046 Homeobox HMMSmart IPR001356 132 194 SM00389 Homeobox ProfileScan IPR001356 130 190 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001129743 301 217095,611770 100.0 100.0 NP_660328 364 606727 46.7 96.0 NP_002500 273 604612 40.4 89.7 NP_003308 371 118700,188550,600635,610978 36.8 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8942 Download

>KIBB8942  903 bp
ATGCTGCTGAGCCCCGTCACCTCCACCCCCTTCTCGGTCAAGGACATCCTGCGACTGGAG
CGCGAGCGGAGCTGCCCCGCGGCTTCGCCACATCCGCGGGTGCGGAAGAGCCCGGAAAAC
TTTCAGTACCTGAGAATGGACGCAGAGCCGCGAGGGTCAGAGGTTCACAACGCTGGTGGC
GGCGGCGGTGACAGAAAGCTGGATGGTTCGGAGCCTCCTGGGGGTCCCTGTGAGGCAGTC
TTGGAGATGGACGCGGAACGGATGGGGGAGCCACAGCCCGGCCTGAACGCGGCCTCGCCC
CTCGGCGGCGGGACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGG
GGTGGCCGCTCGGAGCAGCCCAAGGCGCGGCAACGACGGAAGCCGCGCGTGCTCTTTTCG
CAGGCGCAGGTGCTGGCCCTGGAGCGGCGCTTCAAGCAGCAGCGGTACCTGTCAGCGCCC
GAGCGCGAGCACCTGGCCAGCGCGCTGCAGCTCACGTCCACGCAGGTCAAGATCTGGTTC
CAGAACCGACGCTACAAATGCAAGAGACAGCGCCAGGACAAGTCGCTGGAACTGGCTGGC
CACCCTCTAACGCCGCGCCGAGTAGCTGTGCCCGTCCTGGTGCGCGATGGCAAGCCCTGC
CTGGGCCCCGGGCCCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCC
TACTCTTGCTACGGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTAC
GCGGGCGCGCCCTCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACAC
GGTGGCCAGAATGCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCC
TGG

ORF Protein

Cloned ORF protein sequence for pF1KB8942 Download

>KIBB8942  301 aa
MLLSPVTSTPFSVKDILRLERERSCPAASPHPRVRKSPENFQYLRMDAEPRGSEVHNAGG
GGGDRKLDGSEPPGGPCEAVLEMDAERMGEPQPGLNAASPLGGGTRVPERGVGNSGDSVR
GGRSEQPKARQRRKPRVLFSQAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWF
QNRRYKCKRQRQDKSLELAGHPLTPRRVAVPVLVRDGKPCLGPGPGAPAFPSPYSAAVSP
YSCYGGYSGAPYGAGYGTCYAGAPSGPAPHTPLASAGFGHGGQNATPQGHLAATLQGVRA
W

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8942 Download

>pF1KB8942  4016 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGCTGAGC
CCCGTCACCTCCACCCCCTTCTCGGTCAAGGACATCCTGCGACTGGAGCGCGAGCGGAGC
TGCCCCGCGGCTTCGCCACATCCGCGGGTGCGGAAGAGCCCGGAAAACTTTCAGTACCTG
AGAATGGACGCAGAGCCGCGAGGGTCAGAGGTTCACAACGCTGGTGGCGGCGGCGGTGAC
AGAAAGCTGGATGGTTCGGAGCCTCCTGGGGGTCCCTGTGAGGCAGTCTTGGAGATGGAC
GCGGAACGGATGGGGGAGCCACAGCCCGGCCTGAACGCGGCCTCGCCCCTCGGCGGCGGG
ACCAGGGTGCCAGAGCGCGGCGTTGGCAACAGCGGCGACAGCGTGCGGGGTGGCCGCTCG
GAGCAGCCCAAGGCGCGGCAACGACGGAAGCCGCGCGTGCTCTTTTCGCAGGCGCAGGTG
CTGGCCCTGGAGCGGCGCTTCAAGCAGCAGCGGTACCTGTCAGCGCCCGAGCGCGAGCAC
CTGGCCAGCGCGCTGCAGCTCACGTCCACGCAGGTCAAGATCTGGTTCCAGAACCGACGC
TACAAATGCAAGAGACAGCGCCAGGACAAGTCGCTGGAACTGGCTGGCCACCCTCTAACG
CCGCGCCGAGTAGCTGTGCCCGTCCTGGTGCGCGATGGCAAGCCCTGCCTGGGCCCCGGG
CCCGGCGCACCTGCCTTCCCCAGCCCCTACAGTGCAGCAGTGTCGCCCTACTCTTGCTAC
GGAGGCTACAGCGGAGCACCCTACGGCGCAGGCTACGGCACCTGCTACGCGGGCGCGCCC
TCGGGTCCTGCGCCACACACACCACTGGCCAGCGCGGGCTTCGGACACGGTGGCCAGAAT
GCCACCCCGCAGGGCCATCTGGCAGCCACGCTGCAGGGTGTCAGGGCCTGGGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT