RAB17 ORF clone FXC02886

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Flexi ORF Clone FXC02886

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Clone info.

Species

human

Clone Name

pF1KB8602 Sequence (with vector) Restriction Map

Product ID

FXC02886

HaloTag Clone PID

FHC02886

ORF Sequence

DNA sequence (636 bp)
Protein sequence (212 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463205]

Gene

KIBB8602

Symbol

RAB17

Description

RAB17, member RAS oncogene family, transcript variant 1

Original Clone ID

oc00259

Features of the cloned ORF sequence

Description

Length: 636 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 212 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2520.1 8e-84 99.5 RAB17 CCDS11419.1 7.8e-32 44.2 RAB5C CCDS58551.1 8.8e-32 44.2 RAB5C CCDS2633.1 2.8e-30 44.4 RAB5A CCDS8900.1 5.2e-30 40.8 RAB5B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001806 20 41 PR00449 Ras GTPase IPR001806 60 82 PR00449 Ras GTPase IPR001806 123 136 PR00449 Ras GTPase IPR001806 158 180 PR00449 Ras GTPase HMMPfam IPR013753 21 181 PF00071 Ras HMMSmart IPR003577 17 183 SM00173 Ras small GTPase IPR003579 20 183 SM00175 Ras small GTPase IPR003578 22 183 SM00174 Small GTPase IPR002041 25 212 SM00176 Ran GTPase HMMTigr IPR005225 20 176 TIGR00231 Small GTP-binding protein domain ProfileScan IPR020851 15 210 PS51419 Small GTPase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071894 212 602206 99.5 100.0 XP_006712752 190 602206 89.2 100.0 NP_958842 216 604037 44.2 96.7 NP_004574 216 604037 44.2 96.7 XP_011523393 216 604037 44.2 96.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8602 Download

>KIBB8602  636 bp
ATGGCACAGGCACACAGGACCCCCCAGCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTC
AAGCTGGTTCTCCTGGGAAGTGGCTCCGTGGGTAAGTCCAGCTTGGCTCTTCGGTACGTG
AAGAACGACTTCAAGAGTATCCTGCCTACGGTGGGCTGTGCGTTCTTCACAAAGGTGGTG
GATGTGGGTGCCACCTCTCTGAAGCTTGAGATCTGGGACACAGCTGGCCAGGAGAAGTAC
CACAGCGTCTGCCACCTCTACTTCAGGGGTGCCAACGCTGCGCTTCTGGTGTACGACATC
ACCAGGAAGGATTCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGACCTGGAGGAGGAGCTG
CACCCAGGAGAAGTCCTGGTGATGCTGGTGGGCAACAAGACGGACCTCAGCCAGGAGCGG
GAGGTGACCTTCCAGGAAGGGAAGGAGTTTGCCGACAGCCAGAAGTTGCCGTTCATGGAA
ACTTCGGCCAAACTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCTA
CTGCAGAGAAGCGACGAGGAGGGCCAGGCTCTACGGGGGGATGCAGCTGTGGCTCTGAAC
AAGGGGCCCGCGAGGCAGGCCAAATGCTGCGCCCAC

ORF Protein

Cloned ORF protein sequence for pF1KB8602 Download

>KIBB8602  212 aa
MAQAHRTPQPRAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKSILPTVGCAFFTKVV
DVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEEL
HPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLPFMETSAKLNHQVSEVFNTVAQEL
LQRSDEEGQALRGDAAVALNKGPARQAKCCAH

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8602 Download

>pF1KB8602  3749 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCACAGGCA
CACAGGACCCCCCAGCCCAGGGCTGCCCCCAGCCAGCCCCGTGTGTTCAAGCTGGTTCTC
CTGGGAAGTGGCTCCGTGGGTAAGTCCAGCTTGGCTCTTCGGTACGTGAAGAACGACTTC
AAGAGTATCCTGCCTACGGTGGGCTGTGCGTTCTTCACAAAGGTGGTGGATGTGGGTGCC
ACCTCTCTGAAGCTTGAGATCTGGGACACAGCTGGCCAGGAGAAGTACCACAGCGTCTGC
CACCTCTACTTCAGGGGTGCCAACGCTGCGCTTCTGGTGTACGACATCACCAGGAAGGAT
TCCTTCCTCAAGGCTCAGCAGTGGCTGAAGGACCTGGAGGAGGAGCTGCACCCAGGAGAA
GTCCTGGTGATGCTGGTGGGCAACAAGACGGACCTCAGCCAGGAGCGGGAGGTGACCTTC
CAGGAAGGGAAGGAGTTTGCCGACAGCCAGAAGTTGCCGTTCATGGAAACTTCGGCCAAA
CTGAACCACCAGGTGTCGGAGGTGTTCAATACAGTGGCCCAAGAGCTACTGCAGAGAAGC
GACGAGGAGGGCCAGGCTCTACGGGGGGATGCAGCTGTGGCTCTGAACAAGGGGCCCGCG
AGGCAGGCCAAATGCTGCGCCCACGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGT
GAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTG
AGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGT
AATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCA
AGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATAC
TGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTAC
ATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCT
TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGG
GGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACA
GCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGT
AAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTA
TCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTC
GTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGC
CTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAA
CCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT