PLEKHF1 ORF clone FXC02260

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Flexi ORF Clone FXC02260

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Clone info.

Species

human

Clone Name

pF1KB7115 Sequence (with vector) Restriction Map

Product ID

FXC02260

HaloTag Clone PID

FHC02260

ORF Sequence

DNA sequence (837 bp)
Protein sequence (279 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464028]

Gene

KIBB7115

Symbol

PLEKHF1

Alias : APPD, LAPF, PHAFIN1, ZFYVE15

Description

pleckstrin homology domain containing, family F (with FYVE domain) member 1

Original Clone ID

cp01120

Features of the cloned ORF sequence

Description

Length: 837 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 279 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12417.1 3.1e-96 100.0 PLEKHF1 CCDS6267.1 1.1e-47 56.0 PLEKHF2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001849 39 130 PF00169 Pleckstrin homology domain IPR000306 148 211 PF01363 Zinc finger HMMSmart IPR001849 36 133 SM00233 Pleckstrin homology domain IPR000306 144 213 SM00064 Zinc finger ProfileScan IPR001849 35 131 PS50003 Pleckstrin homology domain IPR017455 152 212 PS50178 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_077286 279 615200 100.0 100.0 XP_011525611 279 615200 100.0 100.0 XP_005259313 364 615200 100.0 100.0 NP_078889 249 615208 56.0 90.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7115 Download

>KIBB7115  837 bp
ATGGTGGACCACTTGGCCAACACGGAGATCAACAGCCAGCGCATCGCGGCAGTGGAGAGC
TGCTTCGGGGCCTCGGGGCAGCCGCTGGCGCTGCCAGGCCGAGTGCTGCTGGGCGAGGGC
GTGCTGACCAAAGAGTGCCGCAAGAAGGCCAAGCCGCGCATCTTCTTCCTCTTTAACGAC
ATCCTGGTGTATGGCAGCATCGTGCTCAACAAGCGCAAGTACCGCAGCCAGCACATCATC
CCCCTGGAGGAGGTCACACTGGAGCTGTTGCCGGAGACGCTGCAGGCCAAGAACCGCTGG
ATGATCAAGACGGCCAAGAAGTCCTTTGTGGTGTCGGCCGCCTCCGCTACGGAGCGCCAG
GAATGGATTAGCCACATCGAGGAGTGCGTGCGGCGGCAACTGAGGGCCACGGGCCGCCCG
CCCAGCACGGAGCACGCGGCACCCTGGATCCCCGACAAGGCCACGGACATCTGCATGCGC
TGCACGCAGACGCGCTTCTCTGCCCTCACGAGGCGCCACCACTGCCGCAAGTGCGGCTTC
GTGGTCTGCGCTGAGTGCTCGCGCCAGCGCTTCCTGCTCCCGCGCCTGTCCCCCAAGCCC
GTGCGCGTCTGCAGCCTCTGCTACCGCGAACTGGCCGCCCAGCAGCGGCAGGAGGAGGCG
GAGGAGCAGGGCGCGGGGTCCCCAGGGCAGCCAGCCCACCTGGCCCGGCCCATCTGCGGA
GCGTCCAGTGGAGATGACGATGACTCCGACGAGGACAAGGAGGGCAGCAGGGACGGCGAC
TGGCCCAGCAGCGTGGAGTTCTACGCCTCGGGGGTGGCCTGGTCTGCCTTCCACAGC

ORF Protein

Cloned ORF protein sequence for pF1KB7115 Download

>KIBB7115  279 aa
MVDHLANTEINSQRIAAVESCFGASGQPLALPGRVLLGEGVLTKECRKKAKPRIFFLFND
ILVYGSIVLNKRKYRSQHIIPLEEVTLELLPETLQAKNRWMIKTAKKSFVVSAASATERQ
EWISHIEECVRRQLRATGRPPSTEHAAPWIPDKATDICMRCTQTRFSALTRRHHCRKCGF
VVCAECSRQRFLLPRLSPKPVRVCSLCYRELAAQQRQEEAEEQGAGSPGQPAHLARPICG
ASSGDDDDSDEDKEGSRDGDWPSSVEFYASGVAWSAFHS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7115 Download

>pF1KB7115  3950 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGTGGACCAC
TTGGCCAACACGGAGATCAACAGCCAGCGCATCGCGGCAGTGGAGAGCTGCTTCGGGGCC
TCGGGGCAGCCGCTGGCGCTGCCAGGCCGAGTGCTGCTGGGCGAGGGCGTGCTGACCAAA
GAGTGCCGCAAGAAGGCCAAGCCGCGCATCTTCTTCCTCTTTAACGACATCCTGGTGTAT
GGCAGCATCGTGCTCAACAAGCGCAAGTACCGCAGCCAGCACATCATCCCCCTGGAGGAG
GTCACACTGGAGCTGTTGCCGGAGACGCTGCAGGCCAAGAACCGCTGGATGATCAAGACG
GCCAAGAAGTCCTTTGTGGTGTCGGCCGCCTCCGCTACGGAGCGCCAGGAATGGATTAGC
CACATCGAGGAGTGCGTGCGGCGGCAACTGAGGGCCACGGGCCGCCCGCCCAGCACGGAG
CACGCGGCACCCTGGATCCCCGACAAGGCCACGGACATCTGCATGCGCTGCACGCAGACG
CGCTTCTCTGCCCTCACGAGGCGCCACCACTGCCGCAAGTGCGGCTTCGTGGTCTGCGCT
GAGTGCTCGCGCCAGCGCTTCCTGCTCCCGCGCCTGTCCCCCAAGCCCGTGCGCGTCTGC
AGCCTCTGCTACCGCGAACTGGCCGCCCAGCAGCGGCAGGAGGAGGCGGAGGAGCAGGGC
GCGGGGTCCCCAGGGCAGCCAGCCCACCTGGCCCGGCCCATCTGCGGAGCGTCCAGTGGA
GATGACGATGACTCCGACGAGGACAAGGAGGGCAGCAGGGACGGCGACTGGCCCAGCAGC
GTGGAGTTCTACGCCTCGGGGGTGGCCTGGTCTGCCTTCCACAGCGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT