CIAO1 ORF clone FXC02084

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Flexi ORF Clone FXC02084

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Clone info.

Species

human

Clone Name

pF1KB3413 Sequence (with vector) Restriction Map

Product ID

FXC02084

HaloTag Clone PID

FHC02084

ORF Sequence

DNA sequence (1017 bp)
Protein sequence (339 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463559]

Gene

KIBB3413

Symbol

CIAO1

Alias : CIA1, WDR39

Description

cytosolic iron-sulfur assembly component 1

Original Clone ID

ha01326

Features of the cloned ORF sequence

Description

Length: 1017 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 339 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2019.1 2.7e-111 100.0 CIAO1 CCDS46961.1 1.5e-13 32.8 TBL1XR1 CCDS14779.1 2.4e-12 34.0 TBL1Y CCDS48078.1 3.7e-12 34.0 TBL1X CCDS14133.1 4e-12 34.0 TBL1X The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR019781 17 43 PF00400 WD40 repeat IPR019781 50 89 PF00400 WD40 repeat IPR019781 96 133 PF00400 WD40 repeat IPR019781 141 177 PF00400 WD40 repeat IPR019781 184 221 PF00400 WD40 repeat IPR019781 241 279 PF00400 WD40 repeat IPR019781 299 332 PF00400 WD40 repeat HMMSmart IPR001680 4 44 SM00320 WD40 repeat IPR001680 49 89 SM00320 WD40 repeat IPR001680 94 133 SM00320 WD40 repeat IPR001680 139 178 SM00320 WD40 repeat IPR001680 183 222 SM00320 WD40 repeat IPR001680 240 280 SM00320 WD40 repeat IPR001680 291 332 SM00320 WD40 repeat ProfileScan NULL 1 34 PS51257 NULL IPR019782 22 43 PS50082 WD40 repeat 2 IPR017986 22 339 PS50294 WD40-repeat-containing domain IPR019782 57 89 PS50082 WD40 repeat 2 IPR019782 101 142 PS50082 WD40 repeat 2 IPR019782 146 177 PS50082 WD40 repeat 2 IPR019782 190 221 PS50082 WD40 repeat 2 IPR019782 299 339 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004795 339 604333 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3413 Download

>KIBB3413  1017 bp
ATGAAGGACTCGCTGGTGCTGCTGGGCCGTGTCCCGGCGCACCCGGACTCCCGCTGCTGG
TTCCTGGCCTGGAACCCCGCGGGGACCCTGCTGGCCTCGTGCGGCGGCGACCGGAGAATC
CGCATCTGGGGCACGGAGGGTGACAGCTGGATCTGCAAGTCTGTCCTTTCTGAAGGCCAC
CAGCGCACCGTGCGGAAGGTAGCCTGGTCCCCCTGCGGTAATTACCTGGCCTCTGCCAGC
TTTGATGCTACCACTTGCATTTGGAAGAAGAACCAGGATGACTTTGAGTGTGTAACCACT
CTCGAGGGCCATGAAAATGAGGTCAAGTCAGTGGCTTGGGCCCCATCTGGCAACCTCCTG
GCCACTTGCAGCCGAGATAAGAGCGTTTGGGTCTGGGAAGTTGATGAAGAGGATGAGTAT
GAATGTGTCAGTGTTCTCAACTCCCACACACAGGATGTCAAGCATGTGGTTTGGCACCCA
AGTCAGGAGCTCTTAGCTTCTGCCAGCTATGATGACACAGTGAAGCTGTACCGGGAGGAA
GAGGATGACTGGGTATGCTGTGCCACCCTTGAGGGCCATGAATCCACTGTGTGGAGCTTG
GCCTTTGACCCGAGTGGCCAGCGCCTGGCGTCTTGTAGTGATGACCGTACTGTGCGTATC
TGGCGTCAGTATCTACCAGGCAATGAACAAGGGGTGGCATGCAGCGGCTCTGACCCCAGT
TGGAAATGTATCTGTACTTTGTCCGGCTTCCACTCAAGGACCATTTATGACATTGCTTGG
TGTCAGCTGACAGGGGCTCTGGCCACAGCTTGTGGGGATGACGCGATCCGCGTGTTTCAG
GAGGATCCCAACTCGGATCCACAGCAGCCCACCTTCTCCCTGACAGCCCACTTGCATCAG
GCCCATTCCCAGGATGTCAACTGTGTGGCCTGGAACCCCAAGGAGCCAGGGCTACTGGCC
TCCTGCAGTGATGATGGGGAGGTGGCCTTCTGGAAGTATCAGCGGCCTGAAGGCCTC

ORF Protein

Cloned ORF protein sequence for pF1KB3413 Download

>KIBB3413  339 aa
MKDSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE
EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS
WKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ
AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3413 Download

>pF1KB3413  4130 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAAGGACTCG
CTGGTGCTGCTGGGCCGTGTCCCGGCGCACCCGGACTCCCGCTGCTGGTTCCTGGCCTGG
AACCCCGCGGGGACCCTGCTGGCCTCGTGCGGCGGCGACCGGAGAATCCGCATCTGGGGC
ACGGAGGGTGACAGCTGGATCTGCAAGTCTGTCCTTTCTGAAGGCCACCAGCGCACCGTG
CGGAAGGTAGCCTGGTCCCCCTGCGGTAATTACCTGGCCTCTGCCAGCTTTGATGCTACC
ACTTGCATTTGGAAGAAGAACCAGGATGACTTTGAGTGTGTAACCACTCTCGAGGGCCAT
GAAAATGAGGTCAAGTCAGTGGCTTGGGCCCCATCTGGCAACCTCCTGGCCACTTGCAGC
CGAGATAAGAGCGTTTGGGTCTGGGAAGTTGATGAAGAGGATGAGTATGAATGTGTCAGT
GTTCTCAACTCCCACACACAGGATGTCAAGCATGTGGTTTGGCACCCAAGTCAGGAGCTC
TTAGCTTCTGCCAGCTATGATGACACAGTGAAGCTGTACCGGGAGGAAGAGGATGACTGG
GTATGCTGTGCCACCCTTGAGGGCCATGAATCCACTGTGTGGAGCTTGGCCTTTGACCCG
AGTGGCCAGCGCCTGGCGTCTTGTAGTGATGACCGTACTGTGCGTATCTGGCGTCAGTAT
CTACCAGGCAATGAACAAGGGGTGGCATGCAGCGGCTCTGACCCCAGTTGGAAATGTATC
TGTACTTTGTCCGGCTTCCACTCAAGGACCATTTATGACATTGCTTGGTGTCAGCTGACA
GGGGCTCTGGCCACAGCTTGTGGGGATGACGCGATCCGCGTGTTTCAGGAGGATCCCAAC
TCGGATCCACAGCAGCCCACCTTCTCCCTGACAGCCCACTTGCATCAGGCCCATTCCCAG
GATGTCAACTGTGTGGCCTGGAACCCCAAGGAGCCAGGGCTACTGGCCTCCTGCAGTGAT
GATGGGGAGGTGGCCTTCTGGAAGTATCAGCGGCCTGAAGGCCTCGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACC
GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
AAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCT
GGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCA
GAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCT
CGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTC
GGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGT
TCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATC
CGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGC
CACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTG
GTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCC
AGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAG
CGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGA
TCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGAT
TTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATAC
AGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTC
AGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGT
TAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTG
TCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGT
AAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGA
TGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAG
AAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCC
CATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGC
GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCT
TTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAG
CGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAA
CTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTAC
AAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT