LGI3 ORF clone FXC01842

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Flexi ORF Clone FXC01842

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Clone info.

Species

human

Clone Name

pF1KB7021 Sequence (with vector) Restriction Map

Product ID

FXC01842

HaloTag Clone PID

FHC01842

ORF Sequence

DNA sequence (1644 bp)
Protein sequence (548 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385182]

Gene

KIBB7021

Symbol

LGI3

Alias : LGIL4

Description

leucine-rich repeat LGI family, member 3

Original Clone ID

hk10327b

Features of the cloned ORF sequence

Description

Length: 1644 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 548 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6025.1 6.5e-214 100.0 LGI3 CCDS7431.1 5.5e-115 52.0 LGI1 CCDS3431.1 4e-111 51.5 LGI2 CCDS81490.1 5.4e-90 46.2 LGI1 CCDS12444.1 1.6e-85 42.8 LGI4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR005492 221 263 PF03736 Leucine-rich glioma-inactivated IPR005492 269 309 PF03736 Leucine-rich glioma-inactivated IPR005492 313 360 PF03736 Leucine-rich glioma-inactivated IPR005492 362 405 PF03736 Leucine-rich glioma-inactivated IPR005492 409 453 PF03736 Leucine-rich glioma-inactivated IPR005492 454 497 PF03736 Leucine-rich glioma-inactivated IPR005492 500 540 PF03736 Leucine-rich glioma-inactivated HMMSmart IPR003591 87 110 SM00369 Leucine-rich repeat IPR003591 111 134 SM00369 Leucine-rich repeat IPR003591 135 158 SM00369 Leucine-rich repeat IPR000483 170 219 SM00082 Cysteine-rich flanking region ProfileScan IPR001611 89 110 PS51450 Leucine-rich repeat IPR001611 113 134 PS51450 Leucine-rich repeat IPR001611 137 158 PS51450 Leucine-rich repeat IPR001611 161 182 PS51450 Leucine-rich repeat IPR009039 221 264 PS50912 EAR IPR009039 267 310 PS50912 EAR IPR009039 313 361 PS50912 EAR IPR009039 362 406 PS50912 EAR IPR009039 409 453 PS50912 EAR IPR009039 454 497 PS50912 EAR IPR009039 500 543 PS50912 EAR
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_644807 548 608302 100.0 100.0 NP_005088 557 600512,604619 52.0 96.2 NP_060646 545 608301 51.5 98.7 NP_001295205 509 600512,604619 46.2 96.2 NP_644813 537 608303 42.8 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7021 Download

>KIBB7021  1644 bp
ATGGCGGGGCTGCGGGCCAGGGGGGGCCCGGGGCCGGGGCTGCTGGCGCTCTCCGCGCTC
GGCTTCTGCCTCATGCTGCAAGTCAGCGCTAAGAGGCCCCCCAAGACGCCCCCCTGCCCG
CCCAGCTGCTCTTGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGG
AACCTGCCCTCGGAGGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAG
GATGGAGCGTTCTCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAACAAGTTT
ACACTGATTGGAGACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTTCATTGAG
AACAATGACATCTGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGACTCAC
CTCTCGCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGAC
ATCCTGAATGACTTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGG
TTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCG
CCCCGCTTCCAGGAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTCGATTGCATCACC
ACAGATTTTGTGTTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTC
TACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTG
AAGTGGGACTATGTTGAGCGGCAGCTTCGAGACTATGATAGAATCCCAGCCCCCTCTGCA
GTGCACTGCAAGCCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGTGGCCCAGCTGTTT
GGCGGCTCTTACATTTACCACTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGAC
ATTGACCCGCAGCGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGAC
TGGTACTTTGCCGTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCAC
CAGAATGGCTTCTACTCCCACCAGGCACTGCACCCCTGGCACCGTGACACCGACCTGGAG
TTTGTGGACGGCGAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTC
ATCTATCAGTGGAGTCGCACCCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCAGGTG
CCTGATGCCCAAGCTGTGAAACACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGC
CGCTACATTGGCGACTCCAAGATCCTGCGCTGGGAGGGTACCCGCTTCTCGGAGGTGCAG
GCCCTGCCCTCCCGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGGTGGCCGCCGCTAC
CTGGCACTGGGCAGTGATTTCTCCTTCACCCAGATCTACCAGTGGGATGAGGGACGACAG
AAGTTTGTACGGTTCCAGGAGCTGGCTGTGCAGGCTCCTCGGGCCTTCTGCTACATGCCT
GCTGGGGACGCCCAGCTACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTGTATAGA
CACATTGTGGTGGATCTCAGTGCC

ORF Protein

Cloned ORF protein sequence for pF1KB7021 Download

>KIBB7021  548 aa
MAGLRARGGPGPGLLALSALGFCLMLQVSAKRPPKTPPCPPSCSCTRDTAFCVDSKAVPR
NLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFTGLSHLQYLFIE
NNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILNDLDLRGNSLNCDCKVKW
LVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLYQTLAFPAVSAEPFL
YSSDLYLALAQPGVSACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDSQLYVVVAQLF
GGSYIYHWDPNTTRFTRLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWH
QNGFYSHQALHPWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRTQKQFVAQGEVTQV
PDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGRRY
LALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYR
HIVVDLSA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7021 Download

>pF1KB7021  4757 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGGGCTG
CGGGCCAGGGGGGGCCCGGGGCCGGGGCTGCTGGCGCTCTCCGCGCTCGGCTTCTGCCTC
ATGCTGCAAGTCAGCGCTAAGAGGCCCCCCAAGACGCCCCCCTGCCCGCCCAGCTGCTCT
TGCACCAGGGACACCGCCTTCTGCGTGGACTCAAAGGCGGTGCCCAGGAACCTGCCCTCG
GAGGTCATCTCCCTGACCCTGGTGAATGCCGCCTTCTCAGAGATCCAGGATGGAGCGTTC
TCCCACCTCCCGCTGCTGCAGTTCTTGTTACTCAACTCCAACAAGTTTACACTGATTGGA
GACAACGCCTTCACAGGACTGTCGCACCTGCAGTATCTCTTCATTGAGAACAATGACATC
TGGGCACTATCCAAGTTCACCTTCCGAGGACTCAAGTCCTTGACTCACCTCTCGCTGGCC
AACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGGCCCCTGGACATCCTGAATGAC
TTGGACCTGCGGGGCAACTCACTCAACTGTGACTGCAAGGTGAAGTGGTTGGTGGAGTGG
CTGGCACACACCAACACCACGGTGGCACCCATCTACTGCGCCAGCCCGCCCCGCTTCCAG
GAGCACAAGGTGCAGGACCTGCCGCTGCGGGAGTTCGATTGCATCACCACAGATTTTGTG
TTGTACCAGACCCTGGCCTTCCCAGCAGTGTCGGCTGAGCCCTTCCTCTACTCCAGTGAC
CTCTATTTGGCTCTGGCCCAGCCAGGAGTCAGTGCCTGCACCATCCTGAAGTGGGACTAT
GTTGAGCGGCAGCTTCGAGACTATGATAGAATCCCAGCCCCCTCTGCAGTGCACTGCAAG
CCGATGGTGGTGGACAGCCAGCTGTACGTGGTCGTGGCCCAGCTGTTTGGCGGCTCTTAC
ATTTACCACTGGGATCCCAACACCACGCGCTTCACCAGGCTGCAAGACATTGACCCGCAG
CGCGTGCGCAAGCCTAACGACCTAGAAGCCTTCCGCATCGACGGTGACTGGTACTTTGCC
GTGGCTGACAGCTCCAAGGCAGGCGCCACCAGCCTCTACCGCTGGCACCAGAATGGCTTC
TACTCCCACCAGGCACTGCACCCCTGGCACCGTGACACCGACCTGGAGTTTGTGGACGGC
GAGGGCAAGCCACGGCTGATTGTGTCCAGCAGCTCCCAGGCACCCGTCATCTATCAGTGG
AGTCGCACCCAGAAGCAGTTTGTGGCCCAGGGTGAGGTGACCCAGGTGCCTGATGCCCAA
GCTGTGAAACACTTTCGTGCCGGCCGCGACAGCTACCTGTGCCTCAGCCGCTACATTGGC
GACTCCAAGATCCTGCGCTGGGAGGGTACCCGCTTCTCGGAGGTGCAGGCCCTGCCCTCC
CGGGGCTCGCTGGCCCTGCAGCCCTTCCTTGTGGGTGGCCGCCGCTACCTGGCACTGGGC
AGTGATTTCTCCTTCACCCAGATCTACCAGTGGGATGAGGGACGACAGAAGTTTGTACGG
TTCCAGGAGCTGGCTGTGCAGGCTCCTCGGGCCTTCTGCTACATGCCTGCTGGGGACGCC
CAGCTACTCCTGGCCCCCAGCTTCAAGGGACAGACGCTGGTGTATAGACACATTGTGGTG
GATCTCAGTGCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTT
TGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCC
CGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTT
GCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAAC
TCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGT
GTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCT
GCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGA
CTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC
ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATG
AGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGT
CGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCC
TGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCG
GAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCC
TTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGC
CTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT