TRIM3 ORF clone FXC01832

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Flexi ORF Clone FXC01832

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Clone info.

Species

human

Clone Name

pF1KB5705 Sequence (with vector) Restriction Map

Product ID

FXC01832

HaloTag Clone PID

FHC01832

Original Clone PID

ORK01832

ORF Sequence

DNA sequence (2232 bp)
Protein sequence (744 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385160]

Gene

KIBB5705

Symbol

TRIM3

Alias : BERP, HAC1, RNF22, RNF97

Description

tripartite motif containing 3, transcript variant 1

Original Clone ID

ek00374

Features of the cloned ORF sequence

Description

Length: 2232 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 744 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7764.1 5.7e-199 100.0 TRIM3 CCDS58115.1 2e-163 100.0 TRIM3 CCDS47147.1 1.2e-136 67.3 TRIM2 CCDS3781.2 1.2e-136 67.3 TRIM2 CCDS893.1 1.3e-15 25.7 TRIM45 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 22 62 PF00097 Zinc finger IPR000315 113 150 PF00643 Zinc finger IPR017868 321 415 PF00630 Filamin/ABP280 repeat-like IPR001258 486 513 PF01436 NHL repeat IPR001258 533 560 PF01436 NHL repeat IPR001258 577 602 PF01436 NHL repeat IPR001258 622 649 PF01436 NHL repeat IPR001258 669 696 PF01436 NHL repeat IPR001258 713 737 PF01436 NHL repeat HMMSmart IPR001841 22 62 SM00184 Zinc finger IPR000315 110 151 SM00336 Zinc finger IPR003649 158 284 SM00502 B-box IPR001298 321 421 SM00557 Filamin/ABP280 repeat ProfileScan IPR001841 22 63 PS50089 Zinc finger IPR000315 110 151 PS50119 Zinc finger IPR017868 317 418 PS50194 Filamin/ABP280 repeat-like IPR013017 473 516 PS51125 NHL repeat IPR013017 520 563 PS51125 NHL repeat IPR013017 564 605 PS51125 NHL repeat IPR013017 609 652 PS51125 NHL repeat IPR013017 656 699 PS51125 NHL repeat IPR013017 700 743 PS51125 NHL repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_150594 744 605493 100.0 100.0 XP_011518146 744 605493 100.0 100.0 NP_006449 744 605493 100.0 100.0 XP_016872587 744 605493 100.0 100.0 NP_001234935 744 605493 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5705 Download

>KIBB5705  2232 bp
ATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTG
GTATGCAGCATCTGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACC
TTCTGTGAGAGATGTCTCCAAAACTATATCCCTGCCCAGAGCCTGACGCTATCCTGTCCA
GTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTC
TTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCACGACCCGGAG
GACCCCCACCCCCTCAGTGTAGTGGCTGGCCGCCCTCTCTCCTGCCCCAACCATGAAGGC
AAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCC
GGGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGGATGTGGTGGAGCAGCACAAGGCG
GCCCTGCAGCGCCAGCTCGAGGCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCAATT
GCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAG
ATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTC
AGCGACCTGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACA
CTGCGCCAGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGC
CTGGGCTCGGCCCCGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCA
TTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTT
GAGGTGGACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCC
ACTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCT
GCCTCGCTCACTGTCACTACCAAAGACAAGGACGGGCGGTTGGTGCGCACAGGCAGCGCT
GAGCTGCGTGCAGAGATCACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGAC
CACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCCTC
TCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGT
CCGGGGGACCTGCCACCTTCCCCGGACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGC
CCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGC
GGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGA
AGGGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATC
GTGGTAGCAGACAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGAGGGCCAGTTCAAG
TTCCGTTTTGGGGTCCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCACAGGTGTGGCA
GTGGACACCAATGGAGACATAATTGTGGCAGACTATGACAACCGTTGGGTCAGCATCTTC
TCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGA
GTGGCCGTAGACCGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTT
ACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTTTGGGGGCCGTGGGGCCACTGACCGC
CACTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGAC
TTCCATAACCATTCAGTGAAGGTGTACAGTGCCGATGGAGAGTTCCTCTTCAAGTTTGGC
TCCCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGTAGCTGTGGACTCCAAT
GGAAACATCATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTCTGGC
TCCTTCCTGTCCTATATCAACACATCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCA
CTGACCTCGGATGGCCATGTGGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGCCTAT
CGCTACCTCCAG

ORF Protein

Cloned ORF protein sequence for pF1KB5705 Download

>KIBB5705  744 aa
MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP
VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG
KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI
ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT
LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL
EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA
ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR
PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG
REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA
VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF
TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG
SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA
LTSDGHVVVADAGNHCFKAYRYLQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5705 Download

>pF1KB5705  5345 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCAAAGAGG
GAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCATC
TGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACCTTCTGTGAGAGA
TGTCTCCAAAACTATATCCCTGCCCAGAGCCTGACGCTATCCTGTCCAGTATGCCGGCAG
ACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGC
CTCATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCACGACCCGGAGGACCCCCACCCC
CTCAGTGTAGTGGCTGGCCGCCCTCTCTCCTGCCCCAACCATGAAGGCAAGACGATGGAG
TTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGT
GAGCATGGCACAGTGCTGCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCGC
CAGCTCGAGGCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGG
GGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCG
TTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAG
ACCATTTGTGGGGCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACACTGCGCCAGGGT
CAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCGGCC
CCGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCATTGGCGGCACAG
GCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACGGT
CTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAA
ACGGTGGCCACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACT
GTCACTACCAAAGACAAGGACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTGCA
GAGATCACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGC
ACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCCTCTCGGTGCTGCTC
TACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGTCCGGGGGACCTG
CCACCTTCCCCGGACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCCAT
GTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAG
GACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAGAAAGGT
GAATTCACCAATTTACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGAC
AGCAACAACCAGTGTATTCAGGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGG
GTCCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCACAGGTGTGGCAGTGGACACCAAT
GGAGACATAATTGTGGCAGACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTGAGGGC
AAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGAC
CGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTTACCTTCCAGCCC
AATGGCAAACTGGTTGGCCGTTTTGGGGGCCGTGGGGCCACTGACCGCCACTTTGCAGGG
CCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCAT
TCAGTGAAGGTGTACAGTGCCGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGGCGAG
GGCAATGGGCAGTTCAATGCCCCCACAGGAGTAGCTGTGGACTCCAATGGAAACATCATT
GTGGCTGACTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTCTGGCTCCTTCCTGTCC
TATATCAACACATCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCACTGACCTCGGAT
GGCCATGTGGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGCCTATCGCTACCTCCAG
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCAT
GACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGAT
CAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAA
ACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAA
GGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTT
AGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTT
ACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATA
GTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTT
GGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCAC
GCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGA
GCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCG
CCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAA
AAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACAT
GTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGC
TGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT