ATCAY ORF clone FXC00938

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Flexi ORF Clone FXC00938

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Clone info.

Species

human

Clone Name

pF1KSDA1872 Sequence (with vector) Restriction Map

Product ID

FXC00938

HaloTag Clone PID

FHC00938

ORF Sequence

DNA sequence (1113 bp)
Protein sequence (371 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384313]

Gene

KIAA1872

Symbol

ATCAY

Alias : BNIP-H, CLAC

Description

ataxia, cerebellar, Cayman type

Original Clone ID

hj05518

Features of the cloned ORF sequence

Description

Length: 1113 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 371 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45923.1 6.4e-154 100.0 ATCAY CCDS83375.1 9.3e-59 61.6 PRUNE2 CCDS47982.1 1.7e-58 61.0 PRUNE2 CCDS81889.1 8.5e-57 53.8 BNIP2 CCDS10174.2 9.6e-57 53.8 BNIP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022181 59 191 PF12496 Bcl2-/adenovirus E1B 19kDa-interacting protein 2 IPR001251 244 314 PF00650 Cellular retinaldehyde-binding/triple function HMMSmart IPR001251 171 325 SM00516 Cellular retinaldehyde-binding/triple function ProfileScan IPR001251 171 328 PS50191 Cellular retinaldehyde-binding/triple function
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_149053 371 601238,608179 100.0 100.0 XP_006717047 3101 610691 57.6 93.3 XP_006717045 3104 610691 57.4 94.1 XP_011516628 3085 610691 60.7 86.3 XP_005251808 3075 610691 61.7 84.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1872 Download

>KIAA1872  1113 bp
ATGGGGACCACCGAAGCCACGCTCCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAG
GACGAAGATCTTCCCAGGCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGCAGCCCG
GTGGAAGACACATCCTCTCCTCCCAACACGCTAAATTTCAACGGAGCGCATCGTAAGAGG
AAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTG
TCCGATGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGACC
CCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGGAAGAC
GACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGAC
GGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGG
GAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTTACATGAAAGTGGTCACCCAC
GGAGGGTACTACGGCGAAGGCCTCAACGCCATCATCGTCTTCGCAGCCTGCTTCCTTCCA
GACAGCAGCCTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGC
AGCTTAGAGCTCCTGGTGGCTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGCCC
CGGCGGAGGATGCCTGGAATCGGCTGGCTGAAGAAGTGCTACCAGATGATCGACCGGAGG
TTGCGGAAAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTG
CTGGCCATCTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCAC
AGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTC
CTGCAATACGAAGAGGAAAGACTGAAGGCCAGGAGGGAGAGCGCGAGGCCCCAGCCGGAG
TTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAAAACAGGTCTGCT
CTGGTCTCAGAAGATCAGGAAACAAGCATGTCC

ORF Protein

Cloned ORF protein sequence for pF1KSDA1872 Download

>KIAA1872  371 aa
MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTLNFNGAHRKR
KTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWED
DTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMIRPYMKVVTH
GGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATP
RRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVH
SLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEEKPEVAPVENRSA
LVSEDQETSMS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1872 Download

>pF1KSDA1872  4252 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGGGACCACCGAAGCCACGCTCCGGATGGAAAACGTGGACGTGAAGGAGGAA
TGGCAGGACGAAGATCTTCCCAGGCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGC
AGCCCGGTGGAAGACACATCCTCTCCTCCCAACACGCTAAATTTCAACGGAGCGCATCGT
AAGAGGAAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCC
CTGCTGTCCGATGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATC
GAGACCCCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGG
GAAGACGACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTT
GGGGACGGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATC
ATCGGGGAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTTACATGAAAGTGGTC
ACCCACGGAGGGTACTACGGCGAAGGCCTCAACGCCATCATCGTCTTCGCAGCCTGCTTC
CTTCCAGACAGCAGCCTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTC
ATCAGCAGCTTAGAGCTCCTGGTGGCTGAGGACTACATGATCGTGTACCTGAACGGTGCC
ACGCCCCGGCGGAGGATGCCTGGAATCGGCTGGCTGAAGAAGTGCTACCAGATGATCGAC
CGGAGGTTGCGGAAAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGG
ACTGTGCTGGCCATCTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTAC
GTGCACAGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGAC
TGCGTCCTGCAATACGAAGAGGAAAGACTGAAGGCCAGGAGGGAGAGCGCGAGGCCCCAG
CCGGAGTTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAAAACAGG
TCTGCTCTGGTCTCAGAAGATCAGGAAACAAGCATGTCCTACGTAGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAA
CCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCA
GGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTG
CTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGT
CAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCC
CTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCT
TCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTC
GTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTA
TCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCA
GCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAG
TGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAG
CCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGT
AGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAA
GATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGG
ATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAAT
ACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCT
TCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACG
GTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACC
TGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATG
GTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCAC
GATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGC
AGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGAC
CCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAT
GCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGC
CTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGG
AGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATA
AACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCT
ACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT