VANGL2 ORF clone FXC00769

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Flexi ORF Clone FXC00769

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Clone info.

Species

human

Clone Name

pF1KSDA1215 Sequence (with vector) Restriction Map

Product ID

FXC00769

HaloTag Clone PID

FHC00769

ORF Sequence

DNA sequence (1563 bp)
Protein sequence (521 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384142]

Gene

KIAA1215

Symbol

VANGL2

Alias : LPP1, LTAP, STB1, STBM, STBM1

Description

VANGL planar cell polarity protein 2

Original Clone ID

fh01854

Features of the cloned ORF sequence

Description

Length: 1563 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 521 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS30915.1 5.8e-193 100.0 VANGL2 CCDS883.1 1.7e-142 72.8 VANGL1 CCDS53350.1 2e-142 73.0 VANGL1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR009539 23 521 PF06638 Strabismus
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 110 AAGATLALLSFLTPLAFLLLPPL 132 PRIMARY 23 2 142 GTACEGLFISVAFKLLILLLGSW 164 PRIMARY 23 3 179 FVLRALLMVLVFLLVVSYWLFYG 201 PRIMARY 23 4 218 FAVSLVDALLFVHYLAVVLLELR 240 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011508106 521 182940,600533 100.0 100.0 XP_005245414 521 182940,600533 100.0 100.0 NP_065068 521 182940,600533 100.0 100.0 NP_620409 524 182940,600145,610132 72.8 100.0 NP_001165883 524 182940,600145,610132 72.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1215 Download

>KIAA1215  1563 bp
ATGGACACCGAGTCCCAGTACTCGGGCTATTCCTACAAGTCGGGCCACTCCCGCAGCTCC
CGCAAGCACAGGGACCGCCGGGACCGACACCGCTCTAAGAGTCGAGATGGGGGCCGAGGG
GACAAGTCGGTGACAATCCAGGCTCCCGGGGAGCCCCTGCTGGACAATGAGTCCACACGA
GGGGATGAGCGGGATGACAACTGGGGGGAAACGACGACAGTAGTAACGGGCACCTCAGAG
CACAGCATCTCCCATGATGACCTCACACGCATCGCCAAGGACATGGAGGACAGTGTCCCT
CTGGACTGCTCCCGTCACCTGGGTGTGGCAGCGGGGGCCACCCTGGCACTGCTGTCTTTC
CTCACGCCTCTGGCCTTCCTGCTGCTGCCCCCACTGCTGTGGCGGGAGGAGCTGGAGCCT
TGCGGGACGGCCTGCGAGGGCCTCTTCATCTCTGTCGCCTTCAAGCTGCTCATCCTGCTA
CTGGGCAGCTGGGCTCTGTTCTTCCGCCGGCCCAAGGCCTCGCTGCCCCGCGTCTTTGTG
CTGCGTGCCCTGCTTATGGTGCTGGTTTTCCTGCTCGTGGTCTCCTACTGGCTCTTCTAT
GGTGTGCGCATCCTGGATGCTCGGGAGCGCAGCTACCAGGGCGTGGTGCAGTTCGCCGTG
TCGCTGGTGGACGCCCTTCTTTTCGTGCACTACCTGGCCGTGGTCCTGCTGGAGCTGCGC
CAGCTCCAGCCTCAGTTCACGCTCAAGGTCGTGCGCTCCACCGACGGCGCCAGCCGCTTC
TACAACGTTGGCCATCTCAGCATCCAGCGCGTGGCAGTGTGGATCCTGGAGAAGTATTAC
CATGACTTCCCTGTCTACAACCCTGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAAG
AAAGTGTCTGGCTTCAAGGTGTATTCCCTCGGAGAGGAAAACAGCACCAACAACTCCACT
GGCCAGTCTCGGGCTGTGATTGCAGCGGCAGCTCGGAGGCGGGACAACAGTCACAATGAG
TACTACTATGAGGAGGCTGAGCATGAGCGAAGGGTGCGCAAGAGGAGGGCCAGGCTTGTA
GTGGCGGTGGAGGAGGCCTTCACTCACATTAAGCGGCTGCAGGAAGAGGAGCAGAAAAAC
CCCAGGGAGGTGATGGACCCCCGGGAGGCAGCCCAAGCCATCTTTGCATCCATGGCCCGT
GCCATGCAGAAGTACCTTCGGACCACCAAGCAGCAGCCCTACCACACCATGGAGAGCATC
CTGCAGCACCTTGAATTCTGCATCACGCATGACATGACGCCCAAGGCCTTCTTGGAGCGA
TACTTGGCGGCTGGACCTACCATCCAGTACCACAAGGAACGCTGGCTGGCCAAACAGTGG
ACATTGGTGAGCGAGGAGCCGGTGACCAACGGCCTCAAGGATGGCATCGTTTTCCTCTTA
AAACGCCAGGACTTCAGCCTGGTGGTCAGCACCAAGAAGGTCCCATTCTTCAAACTCTCC
GAGGAATTTGTGGATCCCAAGTCACACAAGTTTGTCATGAGGCTGCAGTCTGAGACCTCA
GTG

ORF Protein

Cloned ORF protein sequence for pF1KSDA1215 Download

>KIAA1215  521 aa
MDTESQYSGYSYKSGHSRSSRKHRDRRDRHRSKSRDGGRGDKSVTIQAPGEPLLDNESTR
GDERDDNWGETTTVVTGTSEHSISHDDLTRIAKDMEDSVPLDCSRHLGVAAGATLALLSF
LTPLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFRRPKASLPRVFV
LRALLMVLVFLLVVSYWLFYGVRILDARERSYQGVVQFAVSLVDALLFVHYLAVVLLELR
QLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYHDFPVYNPALLNLPKSVLAK
KVSGFKVYSLGEENSTNNSTGQSRAVIAAAARRRDNSHNEYYYEEAEHERRVRKRRARLV
VAVEEAFTHIKRLQEEEQKNPREVMDPREAAQAIFASMARAMQKYLRTTKQQPYHTMESI
LQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWLAKQWTLVSEEPVTNGLKDGIVFLL
KRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQSETSV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1215 Download

>pF1KSDA1215  4700 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGACACCGAGTCCCAGTACTCGGGCTATTCCTACAAGTCGGGCCACTCCCGC
AGCTCCCGCAAGCACAGGGACCGCCGGGACCGACACCGCTCTAAGAGTCGAGATGGGGGC
CGAGGGGACAAGTCGGTGACAATCCAGGCTCCCGGGGAGCCCCTGCTGGACAATGAGTCC
ACACGAGGGGATGAGCGGGATGACAACTGGGGGGAAACGACGACAGTAGTAACGGGCACC
TCAGAGCACAGCATCTCCCATGATGACCTCACACGCATCGCCAAGGACATGGAGGACAGT
GTCCCTCTGGACTGCTCCCGTCACCTGGGTGTGGCAGCGGGGGCCACCCTGGCACTGCTG
TCTTTCCTCACGCCTCTGGCCTTCCTGCTGCTGCCCCCACTGCTGTGGCGGGAGGAGCTG
GAGCCTTGCGGGACGGCCTGCGAGGGCCTCTTCATCTCTGTCGCCTTCAAGCTGCTCATC
CTGCTACTGGGCAGCTGGGCTCTGTTCTTCCGCCGGCCCAAGGCCTCGCTGCCCCGCGTC
TTTGTGCTGCGTGCCCTGCTTATGGTGCTGGTTTTCCTGCTCGTGGTCTCCTACTGGCTC
TTCTATGGTGTGCGCATCCTGGATGCTCGGGAGCGCAGCTACCAGGGCGTGGTGCAGTTC
GCCGTGTCGCTGGTGGACGCCCTTCTTTTCGTGCACTACCTGGCCGTGGTCCTGCTGGAG
CTGCGCCAGCTCCAGCCTCAGTTCACGCTCAAGGTCGTGCGCTCCACCGACGGCGCCAGC
CGCTTCTACAACGTTGGCCATCTCAGCATCCAGCGCGTGGCAGTGTGGATCCTGGAGAAG
TATTACCATGACTTCCCTGTCTACAACCCTGCCCTCCTCAACCTGCCCAAGTCCGTCCTG
GCCAAGAAAGTGTCTGGCTTCAAGGTGTATTCCCTCGGAGAGGAAAACAGCACCAACAAC
TCCACTGGCCAGTCTCGGGCTGTGATTGCAGCGGCAGCTCGGAGGCGGGACAACAGTCAC
AATGAGTACTACTATGAGGAGGCTGAGCATGAGCGAAGGGTGCGCAAGAGGAGGGCCAGG
CTTGTAGTGGCGGTGGAGGAGGCCTTCACTCACATTAAGCGGCTGCAGGAAGAGGAGCAG
AAAAACCCCAGGGAGGTGATGGACCCCCGGGAGGCAGCCCAAGCCATCTTTGCATCCATG
GCCCGTGCCATGCAGAAGTACCTTCGGACCACCAAGCAGCAGCCCTACCACACCATGGAG
AGCATCCTGCAGCACCTTGAATTCTGCATCACGCATGACATGACGCCCAAGGCCTTCTTG
GAGCGATACTTGGCGGCTGGACCTACCATCCAGTACCACAAGGAACGCTGGCTGGCCAAA
CAGTGGACATTGGTGAGCGAGGAGCCGGTGACCAACGGCCTCAAGGATGGCATCGTTTTC
CTCTTAAAACGCCAGGACTTCAGCCTGGTGGTCAGCACCAAGAAGGTCCCATTCTTCAAA
CTCTCCGAGGAATTTGTGGATCCCAAGTCACACAAGTTTGTCATGAGGCTGCAGTCTGAG
ACCTCAGTGTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT