TRIM9 ORF clone FXC00493

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Flexi ORF Clone FXC00493

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Clone info.

Species

human

Clone Name

pF1KSDA0282 Sequence (with vector) Restriction Map

Product ID

FXC00493

HaloTag Clone PID

FHC00493

ORF Sequence

DNA sequence (1992 bp)
Protein sequence (664 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383836]

Gene

KIAA0282

Symbol

TRIM9

Alias : RNF91, SPRING

Description

tripartite motif containing 9

Original Clone ID

ha06845s1

Features of the cloned ORF sequence

Description

Length: 1992 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 664 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9703.1 2e-187 99.8 TRIM9 CCDS45105.1 1.7e-150 100.0 TRIM9 CCDS73048.1 2.8e-96 66.6 TRIM67 CCDS44333.1 3.1e-95 62.4 TRIM67 CCDS75287.1 4.1e-20 25.9 TRIM36 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 10 40 PF00097 Zinc finger IPR000315 226 265 PF00643 Zinc finger IPR003961 454 525 PF00041 Fibronectin IPR003877 576 661 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 10 131 SM00184 Zinc finger IPR000315 163 212 SM00336 Zinc finger IPR000315 224 266 SM00336 Zinc finger IPR003649 273 399 SM00502 B-box IPR003961 439 522 SM00060 Fibronectin ProfileScan IPR001841 10 47 PS50089 Zinc finger IPR000315 163 212 PS50119 Zinc finger IPR000315 224 266 PS50119 Zinc finger IPR017903 374 432 PS51262 COS domain IPR003961 439 532 PS50853 Fibronectin IPR001870 517 664 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055978 710 606555 99.8 99.5 XP_016876434 710 606555 99.8 99.5 XP_016876435 706 606555 99.2 99.5 XP_016876436 692 606555 97.0 99.5 XP_016876437 688 606555 96.4 99.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0282 Download

>KIAA0282  1992 bp
ATGGAGGAGATGGAAGAGGAGTTGAAATGCCCCGTGTGCGGCTCCTTCTATCGGGAGCCC
ATCATCCTGCCCTGCTCTCACAATTTGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAG
ACCCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGCGGGCTCCGGGGTCTCCGACTAT
GACTATCTGGACCTGGACAAGATGAGCCTATACAGCGAGGCGGACAGCGGCTATGGCTCC
TACGGGGGGTTCGCCAGCGCCCCCACTACCCCGTGCCAGAAGTCCCCCAACGGCGTCCGC
GTGTTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTGTCACCGGCCCTGGCCCCGGTG
CCCCGCAACTCCTGTATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCTGGATGACCGG
GGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGAAGGGGTAATTGACCGCTACCAGCAG
AGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGAGAAGGCGCCCAAGGAAGCCACCGTC
ATGTGCGAACAGTGCGATGTCTTCTACTGCGATCCGTGCCGCCTGCGCTGCCACCCGCCC
CGGGGGCCCCTAGCCAAGCACCGCCTGGTGCCCCCGGCCCAGGGTCGTGTGAGCCGGAGG
CTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTAC
TGCGTGCAATGCAAGATGCCCGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGC
CACGAAGTCAAGGCTCTGGGGGCCATGTGGAAACTACATAAGAGCCAGCTCTCCCAGGCG
CTGAACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACAGCTGCGCAAC
ATGGTCCAGCAGATCCAGGAGAACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCCCAATGT
GATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTCAACAAG
GAGCATGAGCACAAGCTGAAGGTGGTTCGAGATCAGATCTCTCACTGCACAGTGAAATTG
CGCCAGACCACAGGTCTCATGGAGTACTGCTTGGAGGTGATTAAGGAAAATGATCCTAGT
GGTTTTTTGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACCTGACTGAGGATCAGTGG
GGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGC
CCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCTCCAGTC
CCAGCAACCCCTATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCTACGTTG
TCCTGGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATGGATACATTCTGGAGCTGGAT
GATGGCAACGGTGGTCAATTCCGGGAGGTGTATGTGGGGAAGGAGACAATGTGCACTGTG
GATGGTCTTCACTTCAACAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAAACAGGA
GTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGCCTGGTTTGCTTTC
GACCCTGGCTCGGCGCACTCGGACATCATCCTCTCCAATGACAACCTGACAGTGACCTGT
AGTAGCTATGATGACCGGGTGGTGCTAGGGAAGACTGGCTTCTCCAAGGGCATCCACTAC
TGGGAGCTCACGGTAGATCGCTATGACAACCACCCTGATCCTGCCTTTGGTGTGGCTCGC
ATGGACGTGATGAAGGATGTGATGTTAGGAAAAGACGACAAAGCTTGGGCAATGTATGTG
GACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGAACTGAGGGAGGG
ATCACAAAAGGGGCCACAATTGGGGTCCTCCTCGACTTCAATAGAAAAAACTTGACATTT
TTTTATCAACGA

ORF Protein

Cloned ORF protein sequence for pF1KSDA0282 Download

>KIAA0282  664 aa
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY
DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV
PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV
MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY
CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN
MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL
RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS
PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD
DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVAWFAF
DPGSAHSDIILSNDNLTVTCSSYDDRVVLGKTGFSKGIHYWELTVDRYDNHPDPAFGVAR
MDVMKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDFNRKNLTF
FYQR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0282 Download

>pF1KSDA0282  5131 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGAGGAGATGGAAGAGGAGTTGAAATGCCCCGTGTGCGGCTCCTTCTATCGG
GAGCCCATCATCCTGCCCTGCTCTCACAATTTGTGTCAGGCGTGCGCCCGCAACATCCTG
GTGCAGACCCCAGAGTCTGAATCCCCCCAGAGCCATCGGGCCGCGGGCTCCGGGGTCTCC
GACTATGACTATCTGGACCTGGACAAGATGAGCCTATACAGCGAGGCGGACAGCGGCTAT
GGCTCCTACGGGGGGTTCGCCAGCGCCCCCACTACCCCGTGCCAGAAGTCCCCCAACGGC
GTCCGCGTGTTTCCCCCGGCTATGCCGCCACCGGCCACCCACTTGTCACCGGCCCTGGCC
CCGGTGCCCCGCAACTCCTGTATCACCTGCCCCCAGTGTCACCGCAGCCTCATCCTGGAT
GACCGGGGGCTCCGCGGCTTCCCCAAGAATCGCGTACTGGAAGGGGTAATTGACCGCTAC
CAGCAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGCGAGAAGGCGCCCAAGGAAGCC
ACCGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGATCCGTGCCGCCTGCGCTGCCAC
CCGCCCCGGGGGCCCCTAGCCAAGCACCGCCTGGTGCCCCCGGCCCAGGGTCGTGTGAGC
CGGAGGCTGAGCCCACGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGC
ATGTACTGCGTGCAATGCAAGATGCCCGTGTGCTACCAGTGCTTGGAGGAGGGCAAACAC
TCCAGCCACGAAGTCAAGGCTCTGGGGGCCATGTGGAAACTACATAAGAGCCAGCTCTCC
CAGGCGCTGAACGGACTGTCAGACAGGGCCAAAGAAGCCAAGGAGTTTCTGGTACAGCTG
CGCAACATGGTCCAGCAGATCCAGGAGAACAGTGTGGAGTTTGAAGCCTGTCTGGTGGCC
CAATGTGATGCCCTCATCGATGCCCTCAACAGAAGAAAAGCCCAGCTGCTGGCCCGCGTC
AACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCGAGATCAGATCTCTCACTGCACAGTG
AAATTGCGCCAGACCACAGGTCTCATGGAGTACTGCTTGGAGGTGATTAAGGAAAATGAT
CCTAGTGGTTTTTTGCAGATTTCTGACGCCCTCATAAGAAGAGTGCACCTGACTGAGGAT
CAGTGGGGTAAAGGCACACTCACTCCAAGGATGACCACGGACTTTGACTTGAGTCTGGAC
AACAGCCCTCTGCTGCAATCCATCCACCAGCTGGATTTCGTGCAAGTGAAAGCTTCCTCT
CCAGTCCCAGCAACCCCTATCCTACAGCTGGAGGAATGTTGTACCCACAACAACAGCGCT
ACGTTGTCCTGGAAACAGCCACCTCTGTCCACGGTGCCCGCCGATGGATACATTCTGGAG
CTGGATGATGGCAACGGTGGTCAATTCCGGGAGGTGTATGTGGGGAAGGAGACAATGTGC
ACTGTGGATGGTCTTCACTTCAACAGCACATACAACGCTCGGGTCAAGGCCTTCAACAAA
ACAGGAGTCAGCCCGTACAGCAAGACCCTGGTCCTCCAAACGTCTGAGGTGGCCTGGTTT
GCTTTCGACCCTGGCTCGGCGCACTCGGACATCATCCTCTCCAATGACAACCTGACAGTG
ACCTGTAGTAGCTATGATGACCGGGTGGTGCTAGGGAAGACTGGCTTCTCCAAGGGCATC
CACTACTGGGAGCTCACGGTAGATCGCTATGACAACCACCCTGATCCTGCCTTTGGTGTG
GCTCGCATGGACGTGATGAAGGATGTGATGTTAGGAAAAGACGACAAAGCTTGGGCAATG
TATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGAACTGAG
GGAGGGATCACAAAAGGGGCCACAATTGGGGTCCTCCTCGACTTCAATAGAAAAAACTTG
ACATTTTTTTATCAACGATACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAG
GCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAA
GGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTC
CGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACA
GGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCG
ACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCT
CATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGT
GTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAG
TCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGC
AGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTAC
ACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGA
GTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGC
AAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACG
GGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCA
AAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGG
CCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTA
ATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGA
TTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGC
TGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGC
CCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGAT
CGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAG
AATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTG
AAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAG
GCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTT
GTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAA
GCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAA
GCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTT
TCTAAATACATTCAAATATGTATCCGCTCAT