SNX13 ORF clone FXC00117

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Flexi ORF Clone FXC00117

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Clone info.

Species

human

Clone Name

pF1KA0713 Sequence (with vector) Restriction Map

Product ID

FXC00117

HaloTag Clone PID

FHC00117

Original Clone PID

ORK00117

ORF Sequence

DNA sequence (2871 bp)
Protein sequence (957 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384514]

Gene

KIAA0713

Symbol

SNX13

Alias : RGS-PX1

Description

sorting nexin 13

Original Clone ID

hh12762

Features of the cloned ORF sequence

Description

Length: 2871 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 957 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS47551.1 0 100.0 SNX13 CCDS34116.1 1.3e-19 25.2 SNX25 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003114 99 282 PF02194 Phox-associated domain IPR000342 374 511 PF00615 Regulator of G protein signalling IPR001683 571 675 PF00787 Phox homologous domain IPR013937 792 903 PF08628 Sorting nexin HMMSmart IPR013996 97 284 SM00313 PX-associated IPR000342 373 513 SM00315 Regulator of G protein signalling IPR001683 563 676 SM00312 Phox homologous domain ProfileScan IPR003114 97 284 PS51207 Phox-associated domain IPR000342 373 496 PS50132 Regulator of G protein signalling IPR001683 559 680 PS50195 Phox homologous domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 3 TEASLSIWGWGSLGIVLFLITFG 25 PRIMARY 23 2 31 YLTFYILCFVGGGLVVTLLFGKT 53 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055947 957 606589 100.0 100.0 XP_016867386 1005 606589 99.9 100.0 XP_016867384 855 606589 100.0 84.7 XP_016867382 903 606589 94.4 100.0 XP_005249729 968 606589 98.9 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0713 Download

>KIAA0713  2871 bp
ATGTTAACTGAGGCCAGTCTATCCATATGGGGATGGGGAAGCCTTGGCATTGTCCTTTTT
CTGATAACCTTTGGACCCTTTGTAATATTTTATTTGACATTTTATATCCTCTGCTTTGTG
GGTGGGGGTTTAGTGGTTACTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACCTAGAA
CAGTGTGAACACTCATTTCTTCCTCCAACATCACCTGGGGTTCCTAAGTGCTTAGAAGAA
ATGAAACGGGAAGCCAGGACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATT
GATGAACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGATTATGTCCAGTATTGGTAT
TATACACTAAGCGATGATGAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAAAACGCA
CTCATTCAGTTTGCTACTAGGTCAAAAGAAATAGACTGGCAACCTTATTTTACTACACGC
ATTGTAGATGACTTTGGCACACACTTACGAGTATTCAGAAAGGCTCAACAGAAAATAACA
GAGAAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTT
GAAGTTGAAATGGAGAAGGAGGTTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATGAA
GAAGGATTCCTAAGGGATTTGTGTGAGGTCTTACTATATTTATTGCTACCTCCTGGAGAT
TTCCAGAACAAGATCATGCGATACTTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT
CCATTAATAAATCAACTCAGTGATCCTGATTATATTAATCAGTATGTCATATGGATGATC
CGTGATTCTAACTGCAACTATGAGGCCTTTATGAACATTATTAAATTGAGTGACAATATT
GGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATCTCTA
GATACAGCTGGTGATGATATCAACACTATCAAAAATCAAATAAATAGCTTACTATTCGTA
AAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGTG
AAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGAC
AATGTTGCACTACAATTTTTTATGGATTACATGCAGCAAACTGGAGGTCAAGCACATCTA
TTCTTTTGGATGACAGTGGAAGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTA
TTAAGTCGTCAGAGAGATGGAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCA
GCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAGTTACTGTT
GATGACTATTTAGTAGCAAAATTAGCAGATACTTTGAATCATGAAGATCCAACCCCTGAA
ATCTTTGATGACATTCAAAGAAAGGTATATGAATTGATGCTACGAGATGAAAGATTTTAT
CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTGACATGTTAAAA
GATCCTAGTTTCAGAGGATCCGATGATGGGGATGGAGAATCTTTTAATGGGTCTCCTACA
GGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGTTTCTTCTGATGACTCAGTACAA
CTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCAAGACATATGCATTA
TATGCCATCACTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGT
CGTTATAGTGACTTCCATGACTTCCACATGAGAATCACTGAACAGTTTGAAAGTCTCTCA
AGCATATTGAAACTTCCTGGAAAAAAGACTTTTAATAATATGGATAGAGATTTTTTAGAA
AAGAGAAAAAAGGATCTAAATGCATATTTGCAGTTACTGTTAGCTCCTGAAATGATGAAG
GCATCCCCAGCTTTAGCTCACTATGTGTATGATTTCCTTGAGAACAAAGCCTACAGTAAA
GGAAAAGGGGATTTTGCTCGCAAGATGGACACTTTTGTAAATCCACTTCGCAATTCAATG
AGGAATGTTTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAA
ATGTCAGACAACATGGGCAAAATGTCAGAAAGATTAGGTCAAGACATAAAGCAATCATTT
TTTAAGGTGCCTCCTTTAATTCCTAAGACTGATTCAGACCCTGAACATCGCCGAGTTTCG
GCTCAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTCATG
GATGAAGTATTCGACTTAAAAGAAAGAAATCAGTGGTTGCGAAGGAATATCAAAAACCTA
CTTCAACAGCTTATTAGAGCTACATATGGCGATACTATTAATAGAAAAATAGTTGACCAT
GTTGACTGGATGACTTCACCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGAGATGCA
TTTTGGCCAAATGGCATTTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATG
AGAACAAGAGTAGCAGGAAAAACGAAATTACTTGCAATTATGCCAGATGAGCTGAAGCAC
ATTATTGGGGCTGAGACAACACGGAAAGGTATTCTTCGTGTTTTTGAAATGTTTCAGCAC
AACCAATTAAATAGGAGAATGGTTTATGTCTTCTTGGAAGGCTTTTTAGAAACCTTATTT
CCACAGTATAAATTCCGTGAACTTTTCAACAAACTGCATTCACGGTCAAAGCAGATGCAG
AAATATAAACAGAAACTTCAAACTACTCAAGCGCCTTCTTTGCAGAAAAGG

ORF Protein

Cloned ORF protein sequence for pF1KA0713 Download

>KIAA0713  957 aa
MLTEASLSIWGWGSLGIVLFLITFGPFVIFYLTFYILCFVGGGLVVTLLFGKTNSEKYLE
QCEHSFLPPTSPGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKIT
EKDDQVKGTAEDLVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQRDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSNVSSDDSVQLHAYISDTGVCNDHGKTYALYAITVHRRNLNSEEMWKTYR
RYSDFHDFHMRITEQFESLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLAPEMMK
ASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGKMSERLGQDIKQSFFKVPPLIPKTDSDPEHRRVSAQLDDNVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDA
FWPNGILAEAVPCRDKSIRMRTRVAGKTKLLAIMPDELKHIIGAETTRKGILRVFEMFQH
NQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTTQAPSLQKR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0713 Download

>pF1KA0713  5984 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTTAACTGAG
GCCAGTCTATCCATATGGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGATAACCTTT
GGACCCTTTGTAATATTTTATTTGACATTTTATATCCTCTGCTTTGTGGGTGGGGGTTTA
GTGGTTACTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACCTAGAACAGTGTGAACAC
TCATTTCTTCCTCCAACATCACCTGGGGTTCCTAAGTGCTTAGAAGAAATGAAACGGGAA
GCCAGGACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATTGATGAACCTCTC
CAGCAAGTTATCCAGTTTTCCTTGAGGGATTATGTCCAGTATTGGTATTATACACTAAGC
GATGATGAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAAAACGCACTCATTCAGTTT
GCTACTAGGTCAAAAGAAATAGACTGGCAACCTTATTTTACTACACGCATTGTAGATGAC
TTTGGCACACACTTACGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAGAAAGATGAT
CAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAGTTGAAATG
GAGAAGGAGGTTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTA
AGGGATTTGTGTGAGGTCTTACTATATTTATTGCTACCTCCTGGAGATTTCCAGAACAAG
ATCATGCGATACTTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTTCCATTAATAAAT
CAACTCAGTGATCCTGATTATATTAATCAGTATGTCATATGGATGATCCGTGATTCTAAC
TGCAACTATGAGGCCTTTATGAACATTATTAAATTGAGTGACAATATTGGAGAGCTAGAA
GCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATCTCTAGATACAGCTGGT
GATGATATCAACACTATCAAAAATCAAATAAATAGCTTACTATTCGTAAAGAAGGTATGT
GACTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGTGAAACTTGCAGCA
AACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTA
CAATTTTTTATGGATTACATGCAGCAAACTGGAGGTCAAGCACATCTATTCTTTTGGATG
ACAGTGGAAGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTATTAAGTCGTCAG
AGAGATGGAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGA
ATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAGTTACTGTTGATGACTATTTA
GTAGCAAAATTAGCAGATACTTTGAATCATGAAGATCCAACCCCTGAAATCTTTGATGAC
ATTCAAAGAAAGGTATATGAATTGATGCTACGAGATGAAAGATTTTATCCTTCCTTCAGA
CAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTGACATGTTAAAAGATCCTAGTTTC
AGAGGATCCGATGATGGGGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAAT
TTGTCTTTAGATGACCTTTCAAATGTTTCTTCTGATGACTCAGTACAACTTCATGCCTAC
ATTTCAGACACAGGCGTTTGTAATGATCATGGCAAGACATATGCATTATATGCCATCACT
GTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTTATAGTGAC
TTCCATGACTTCCACATGAGAATCACTGAACAGTTTGAAAGTCTCTCAAGCATATTGAAA
CTTCCTGGAAAAAAGACTTTTAATAATATGGATAGAGATTTTTTAGAAAAGAGAAAAAAG
GATCTAAATGCATATTTGCAGTTACTGTTAGCTCCTGAAATGATGAAGGCATCCCCAGCT
TTAGCTCACTATGTGTATGATTTCCTTGAGAACAAAGCCTACAGTAAAGGAAAAGGGGAT
TTTGCTCGCAAGATGGACACTTTTGTAAATCCACTTCGCAATTCAATGAGGAATGTTTCA
AATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAATGTCAGACAAC
ATGGGCAAAATGTCAGAAAGATTAGGTCAAGACATAAAGCAATCATTTTTTAAGGTGCCT
CCTTTAATTCCTAAGACTGATTCAGACCCTGAACATCGCCGAGTTTCGGCTCAACTTGAC
GATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTCATGGATGAAGTATTC
GACTTAAAAGAAAGAAATCAGTGGTTGCGAAGGAATATCAAAAACCTACTTCAACAGCTT
ATTAGAGCTACATATGGCGATACTATTAATAGAAAAATAGTTGACCATGTTGACTGGATG
ACTTCACCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGAGATGCATTTTGGCCAAAT
GGCATTTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGTA
GCAGGAAAAACGAAATTACTTGCAATTATGCCAGATGAGCTGAAGCACATTATTGGGGCT
GAGACAACACGGAAAGGTATTCTTCGTGTTTTTGAAATGTTTCAGCACAACCAATTAAAT
AGGAGAATGGTTTATGTCTTCTTGGAAGGCTTTTTAGAAACCTTATTTCCACAGTATAAA
TTCCGTGAACTTTTCAACAAACTGCATTCACGGTCAAAGCAGATGCAGAAATATAAACAG
AAACTTCAAACTACTCAAGCGCCTTCTTTGCAGAAAAGGGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTA
TAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGA
GTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCC
TTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGT
TTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGC
GCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTC
TGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGG
CGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCG
GTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGA
ACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGC
GGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGG
GGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCG
ATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTT
TTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCC
TGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT