SUSD6 ORF clone FXC00041

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC00041

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Clone info.

Species

human

Clone Name

pF1KA0247 Sequence (with vector) Restriction Map

Product ID

FXC00041

HaloTag Clone PID

FHC00041

ORF Sequence

DNA sequence (909 bp)
Protein sequence (303 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384452]

Gene

KIAA0247

Symbol

SUSD6

Alias : DRAGO, KIAA0247

Description

sushi domain containing 6

Original Clone ID

ha07001

Features of the cloned ORF sequence

Description

Length: 909 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 303 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9796.1 3.6e-112 100.0 SUSD6 CCDS41471.1 8.3e-20 35.3 SUSD4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000436 42 102 PF00084 Sushi/SCR/CCP HMMSmart IPR000436 42 102 SM00032 Sushi/SCR/CCP ProfileScan IPR000436 40 104 PS50923 Sushi/SCR/CCP
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 14 FAVASVGHGVFLPLVILCTLLGD 36 SECONDARY 23 2 119 LSIVASTASSVALILLLVVLFVL 141 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011535714 303 616761 100.0 100.0 NP_055549 303 616761 100.0 100.0 XP_016877328 303 616761 100.0 100.0 XP_016877327 303 616761 100.0 100.0 XP_011535715 278 616761 99.2 87.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0247 Download

>KIAA0247  909 bp
ATGTGCCATGGCAGGATAGCACCAAAGAGCACCTCAGTGTTTGCCGTGGCCTCCGTGGGA
CATGGAGTGTTCCTTCCGCTAGTGATCCTTTGCACCCTGCTTGGAGACGGACTTGCTTCC
GTGTGCCCCCTACCACCGGAGCCAGAGAATGGTGGCTACATCTGCCACCCCCGGCCCTGC
AGAGACCCCCTGACAGCAGGCAGTGTCATCGAATACCTGTGTGCTGAAGGCTACATGTTG
AAGGGCGATTACAAATACCTGACGTGTAAGAATGGCGAGTGGAAACCAGCCATGGAGATT
AGCTGCCGTCTCAACGAGGATAAAGACACCCACACATCACTTGGGGTCCCCACGCTGTCT
ATAGTGGCTTCTACTGCCAGCTCCGTGGCGCTCATTCTCCTCCTCGTGGTGCTGTTTGTG
CTGCTGCAGCCAAAGCTGAAGTCTTTCCATCATAGCAGGCGTGACCAGGGGGTATCTGGG
GACCAGGTCTCCATCATGGTGGATGGAGTCCAGGTTGCACTACCATCATACGAGGAGGCT
GTATATGGCAGTTCTGGTCACTGTGTGCCACCTGCTGACCCCAGAGTACAGATTGTGCTG
TCAGAAGGGTCTGGGCCCAGTGGGAGGAGCGTGCCAAGGGAGCAACAGCTGCCGGACCAA
GGGGCCTGCTCCTCTGCAGGTGGAGAAGATGAGGCCCCAGGCCAGTCTGGACTATGTGAA
GCCTGGGGCTCTCGGGCCTCAGAGACTGTGATGGTGCATCAGGCAACCACCTCTTCCTGG
GTGGCCGGCTCAGGGAACCGCCAACTGGCACACAAAGAAACTGCAGATTCAGAGAACAGT
GACATACAAAGCCTTTTATCCCTCACGTCAGAGGAGTACACAGATGATATTCCACTGTTG
AAAGAAGCA

ORF Protein

Cloned ORF protein sequence for pF1KA0247 Download

>KIAA0247  303 aa
MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPC
RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLS
IVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEA
VYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCE
AWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPLL
KEA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0247 Download

>pF1KA0247  4022 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGCCATGGC
AGGATAGCACCAAAGAGCACCTCAGTGTTTGCCGTGGCCTCCGTGGGACATGGAGTGTTC
CTTCCGCTAGTGATCCTTTGCACCCTGCTTGGAGACGGACTTGCTTCCGTGTGCCCCCTA
CCACCGGAGCCAGAGAATGGTGGCTACATCTGCCACCCCCGGCCCTGCAGAGACCCCCTG
ACAGCAGGCAGTGTCATCGAATACCTGTGTGCTGAAGGCTACATGTTGAAGGGCGATTAC
AAATACCTGACGTGTAAGAATGGCGAGTGGAAACCAGCCATGGAGATTAGCTGCCGTCTC
AACGAGGATAAAGACACCCACACATCACTTGGGGTCCCCACGCTGTCTATAGTGGCTTCT
ACTGCCAGCTCCGTGGCGCTCATTCTCCTCCTCGTGGTGCTGTTTGTGCTGCTGCAGCCA
AAGCTGAAGTCTTTCCATCATAGCAGGCGTGACCAGGGGGTATCTGGGGACCAGGTCTCC
ATCATGGTGGATGGAGTCCAGGTTGCACTACCATCATACGAGGAGGCTGTATATGGCAGT
TCTGGTCACTGTGTGCCACCTGCTGACCCCAGAGTACAGATTGTGCTGTCAGAAGGGTCT
GGGCCCAGTGGGAGGAGCGTGCCAAGGGAGCAACAGCTGCCGGACCAAGGGGCCTGCTCC
TCTGCAGGTGGAGAAGATGAGGCCCCAGGCCAGTCTGGACTATGTGAAGCCTGGGGCTCT
CGGGCCTCAGAGACTGTGATGGTGCATCAGGCAACCACCTCTTCCTGGGTGGCCGGCTCA
GGGAACCGCCAACTGGCACACAAAGAAACTGCAGATTCAGAGAACAGTGACATACAAAGC
CTTTTATCCCTCACGTCAGAGGAGTACACAGATGATATTCCACTGTTGAAAGAAGCAGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGAC
CAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAA
AGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACC
ACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGT
AACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGG
CCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACC
AGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTT
ACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGA
GCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCT
TCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCG
CACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCA
CCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAA
CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTT
CTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGA
TACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT